BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0056 (548 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g21080.1 68414.m02637 DNAJ heat shock N-terminal domain-conta... 31 0.67 At1g76700.1 68414.m08925 DNAJ heat shock N-terminal domain-conta... 30 1.2 At3g47760.1 68416.m05203 ABC transporter family protein probable... 29 1.5 At3g47750.1 68416.m05202 ABC transporter family protein probable... 29 1.5 At3g55950.1 68416.m06217 protein kinase family protein contains ... 28 4.7 At5g37490.1 68418.m04515 U-box domain-containing protein similar... 27 6.2 At4g08340.1 68417.m01378 Ulp1 protease family protein contains P... 27 8.3 >At1g21080.1 68414.m02637 DNAJ heat shock N-terminal domain-containing protein similar to SP|P39101 CAJ1 protein [Saccharomyces cerevisiae]; contains Pfam profile PF00226 DnaJ domain; Length = 391 Score = 30.7 bits (66), Expect = 0.67 Identities = 11/32 (34%), Positives = 22/32 (68%) Frame = +2 Query: 56 FTNTTQAQRVNVSNASYMVDRVGVLGFIFVTE 151 FT+ +A+ +SNA+Y V+ + +G+I+V + Sbjct: 157 FTSNAEAEVTRLSNAAYGVEMLNTIGYIYVRQ 188 >At1g76700.1 68414.m08925 DNAJ heat shock N-terminal domain-containing protein similar to SP|P39101 CAJ1 protein, Saccharomyces cerevisiae; contains Pfam profile PF00226 DnaJ domain Length = 398 Score = 29.9 bits (64), Expect = 1.2 Identities = 11/32 (34%), Positives = 21/32 (65%) Frame = +2 Query: 56 FTNTTQAQRVNVSNASYMVDRVGVLGFIFVTE 151 F + +A+ +SNA+Y VD + +G+I+V + Sbjct: 158 FISNAEAEVARLSNAAYGVDMLNTIGYIYVRQ 189 >At3g47760.1 68416.m05203 ABC transporter family protein probable transport protein ABC-C, Homo sapiens, PIR2:S71363 Length = 872 Score = 29.5 bits (63), Expect = 1.5 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = -2 Query: 253 ISAHFFVCGISFFRFISYCIAFIAGFEC 170 +S F + G+ FFRF Y I FI F C Sbjct: 351 VSELFLLVGLKFFRFNDYSIQFIFYFLC 378 >At3g47750.1 68416.m05202 ABC transporter family protein probable transport protein ABC-C, Homo sapiens, PIR2:S71363 Length = 944 Score = 29.5 bits (63), Expect = 1.5 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = -2 Query: 253 ISAHFFVCGISFFRFISYCIAFIAGFEC 170 +S F + G+ FFRF Y I FI F C Sbjct: 412 VSELFLLVGLKFFRFNDYSIQFIFYFLC 439 >At3g55950.1 68416.m06217 protein kinase family protein contains protein kinase domain, Pfam:PF00069; similar to cytokinin-regulated kinase 1 [Nicotiana tabacum] gi|10998537|gb|AAG25966 Length = 814 Score = 27.9 bits (59), Expect = 4.7 Identities = 13/40 (32%), Positives = 23/40 (57%) Frame = -2 Query: 175 ECSDRIKKFRNENKT*HPHSVYHIARVRHIHTLRLCSVCE 56 E + ++KKF+ E +T + ++R+ H H +RL CE Sbjct: 527 EVNAKMKKFQ-EKETAFDSEIAFLSRLHHKHLVRLVGYCE 565 >At5g37490.1 68418.m04515 U-box domain-containing protein similar to immediate-early fungal elicitor protein CMPG1 [Petroselinum crispum] GI:14582200; contains Pfam profile PF04564: U-box domain Length = 435 Score = 27.5 bits (58), Expect = 6.2 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Frame = -3 Query: 480 LLTLFCEVI*HTWR*FFRGWFTVLFSRVRSFVMSPLTPLLKPQNLETDRILCPMTKK-TY 304 +LT F ++ HT R +GW S + + +P PL+ + E R L T++ Y Sbjct: 78 VLTTFDQIPNHTIRKMIQGWCVEKGSPLIQRIPTPRVPLMPCEVYEISRKLSSATRRGDY 137 Query: 303 KK 298 +K Sbjct: 138 EK 139 >At4g08340.1 68417.m01378 Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain Length = 988 Score = 27.1 bits (57), Expect = 8.3 Identities = 12/22 (54%), Positives = 13/22 (59%) Frame = +1 Query: 52 LIHKHYTSATCECVERELYGRQ 117 LIH H T ECVE E+ G Q Sbjct: 950 LIHTHATGGVTECVEFEVDGLQ 971 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 10,188,410 Number of Sequences: 28952 Number of extensions: 188143 Number of successful extensions: 414 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 404 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 414 length of database: 12,070,560 effective HSP length: 77 effective length of database: 9,841,256 effective search space used: 1033331880 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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