Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0055
         (589 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q47MT6 Cluster: Protein phosphatase 2C-like precursor; ...    33   4.9  
UniRef50_Q4L4G2 Cluster: Similar to unknown protein; n=6; Bacter...    32   8.6  
UniRef50_A1ZL25 Cluster: Putative uncharacterized protein; n=1; ...    32   8.6  

>UniRef50_Q47MT6 Cluster: Protein phosphatase 2C-like precursor;
           n=1; Thermobifida fusca YX|Rep: Protein phosphatase
           2C-like precursor - Thermobifida fusca (strain YX)
          Length = 368

 Score = 33.1 bits (72), Expect = 4.9
 Identities = 22/52 (42%), Positives = 29/52 (55%)
 Frame = +1

Query: 160 LIILLLFLVAYFIAEGRVPESPSWLFVPSASIPSVLGX*LLGXXYYLSILFG 315
           L++++L L+A  I  G V   P W F PSA I +VL   LL     L+ LFG
Sbjct: 34  LVLIVLVLLAVGIGVGAVWGPPGW-FPPSAVIITVLAGGLLLKRRSLAFLFG 84


>UniRef50_Q4L4G2 Cluster: Similar to unknown protein; n=6;
           Bacteria|Rep: Similar to unknown protein -
           Staphylococcus haemolyticus (strain JCSC1435)
          Length = 105

 Score = 32.3 bits (70), Expect = 8.6
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +3

Query: 480 HVHHETQTTDQRWSENQKTYKYSICFVCEQQMSAQ 584
           H  HET    +RWSE +   K  +C VC+ +MS Q
Sbjct: 43  HEEHETHPI-KRWSEQEFDEKAIMCGVCKHEMSIQ 76


>UniRef50_A1ZL25 Cluster: Putative uncharacterized protein; n=1;
           Microscilla marina ATCC 23134|Rep: Putative
           uncharacterized protein - Microscilla marina ATCC 23134
          Length = 488

 Score = 32.3 bits (70), Expect = 8.6
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = -2

Query: 144 TTSKFWELLNKTKS*SLCINKTAEAIRLGYCTGK*KYYLNT 22
           T ++++E  NKTKS  L +N   + I + Y  G   +Y+NT
Sbjct: 168 TVTEYFEKYNKTKSKVLAVNSRNQPILIKYPHGDGHFYINT 208


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 556,959,232
Number of Sequences: 1657284
Number of extensions: 10252868
Number of successful extensions: 21403
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21401
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 40658285374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)