Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0055
         (589 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK091050-1|BAC03574.1|  723|Homo sapiens protein ( Homo sapiens ...    31   3.0  
AK090435-1|BAC03416.1| 1766|Homo sapiens FLJ00353 protein protein.     31   3.0  
AC007956-2|AAF61275.1| 1822|Homo sapiens unknown protein.              31   3.0  

>AK091050-1|BAC03574.1|  723|Homo sapiens protein ( Homo sapiens
           cDNA FLJ33731 fis, clone BRAWH2017685, moderately
           similar to Mus musculus mRNA for nuclear protein ZAP. ).
          Length = 723

 Score = 31.1 bits (67), Expect = 3.0
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = -3

Query: 284 PNNXKPRTEGMEADGTKSHEGLSGTRPSAMKYAT 183
           P+  +PR EG  A+GTKS  G+    P++  Y T
Sbjct: 359 PDGPRPRYEGHPAEGTKSKWGMIPRGPASQFYIT 392


>AK090435-1|BAC03416.1| 1766|Homo sapiens FLJ00353 protein protein.
          Length = 1766

 Score = 31.1 bits (67), Expect = 3.0
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = -3

Query: 284 PNNXKPRTEGMEADGTKSHEGLSGTRPSAMKYAT 183
           P+  +PR EG  A+GTKS  G+    P++  Y T
Sbjct: 416 PDGPRPRYEGHPAEGTKSKWGMIPRGPASQFYIT 449


>AC007956-2|AAF61275.1| 1822|Homo sapiens unknown protein.
          Length = 1822

 Score = 31.1 bits (67), Expect = 3.0
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = -3

Query: 284 PNNXKPRTEGMEADGTKSHEGLSGTRPSAMKYAT 183
           P+  +PR EG  A+GTKS  G+    P++  Y T
Sbjct: 595 PDGPRPRYEGHPAEGTKSKWGMIPRGPASQFYIT 628


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,990,897
Number of Sequences: 237096
Number of extensions: 1539155
Number of successful extensions: 2069
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2069
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6155099854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)