Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0055
         (589 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66516-3|CAA91356.1|   79|Caenorhabditis elegans Hypothetical pr...    29   3.2  
AF067946-3|AAC17682.1|  288|Caenorhabditis elegans Hypothetical ...    28   4.3  

>Z66516-3|CAA91356.1|   79|Caenorhabditis elegans Hypothetical
           protein W03C9.5 protein.
          Length = 79

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +3

Query: 480 HVHHETQTTDQRWSENQKTYKY 545
           H H E+Q  D++W+ ++K  KY
Sbjct: 54  HQHEESQCPDRKWNPSEKIVKY 75


>AF067946-3|AAC17682.1|  288|Caenorhabditis elegans Hypothetical
           protein W02G9.4 protein.
          Length = 288

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 5/40 (12%)
 Frame = +2

Query: 44  FPVQYPSRIASAVLL-IHRD----YDFVLFNNSQNFDVVA 148
           FP  YP  I+ A L+ +  D    + FV FN    +DVV+
Sbjct: 145 FPYNYPDNISCAFLIKVSADRLISFQFVAFNTEDGYDVVS 184


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,197,294
Number of Sequences: 27780
Number of extensions: 258836
Number of successful extensions: 569
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 569
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)