Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0054
(769 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCP1E11.10 |||ankyrin repeat protein, unknown biological role|S... 49 6e-07
SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 40 3e-04
SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase G... 37 0.004
SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual 36 0.006
SPCC1827.04 |||ankyrin repeat protein, unknown biological role|S... 35 0.011
SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyce... 33 0.034
SPBC211.08c |||ribonuclease PH-like|Schizosaccharomyces pombe|ch... 29 0.55
SPCC1322.13 |ade6|min1|phosphoribosylaminoimidazole carboxylase ... 29 0.73
SPAC13D6.04c |btb3||BTB/POZ domain protein Btb3|Schizosaccharomy... 28 1.7
SPAC18B11.02c |||pseudouridylate synthase |Schizosaccharomyces p... 28 1.7
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 27 3.0
SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharom... 27 3.9
SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein homolog|Schizosacch... 27 3.9
SPBC336.12c |cdc10||MBF transcription factor complex subunit Cdc... 26 6.8
SPAPB1E7.02c |mcl1|slr3|DNA polymerase alpha accessory factor Mc... 25 9.0
SPAC630.13c |tsc2||tuberin|Schizosaccharomyces pombe|chr 1|||Manual 25 9.0
>SPCP1E11.10 |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 207
Score = 49.2 bits (112), Expect = 6e-07
Identities = 21/58 (36%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = +3
Query: 264 GRKDVVEALIEAGVDLNIRTYDG-TPLHEAARYGRASVVHVLLKNGADLNIKDRRGNT 434
G+ DVV +++G+ N +G TP+H A YG + ++ +L++ G D+NI+D+ G T
Sbjct: 15 GKTDVVLKHLDSGISPNAADENGYTPIHAAVSYGHSDLLKILVERGGDINIRDQDGET 72
Score = 34.3 bits (75), Expect = 0.019
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +3
Query: 261 HGRKDVVEALIEAGVDLNIRTYDG-TPLHEAARYGRASVVHVLLKN-GADLNIKDRRG 428
+G D+++ L+E G D+NIR DG TPL + + H L+ AD +K+ G
Sbjct: 47 YGHSDLLKILVERGGDINIRDQDGETPLFVCE---KLEIAHDLINQYNADTTVKNNDG 101
>SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 642
Score = 40.3 bits (90), Expect = 3e-04
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Frame = +3
Query: 276 VVEALIEAGVDLNIRTYD--GTPLHEAARYGRASVVHVLLKNGADLNIKDRRG 428
+ + L+E G D+N D P+H AA+ G VH L+++GAD +KD++G
Sbjct: 49 ICKFLLEHGADVNAIGGDLQAAPIHWAAKRGSVKTVHYLVQHGADPLLKDKQG 101
>SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase
Gde1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1076
Score = 36.7 bits (81), Expect = 0.004
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +3
Query: 276 VVEALIEAGVDLN-IRTYDGTPLHEAARYGRASVVHVLLKNGADLNIKD 419
+VE LI AG + N + T LH A RY R V +LLK GA+ + +D
Sbjct: 349 IVEELILAGFNPNEVDASSNTALHTAVRYNRPECVKMLLKLGANPSARD 397
>SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 234
Score = 35.9 bits (79), Expect = 0.006
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +3
Query: 264 GRKDVVEALIEAGVDLNIRTYD---GTPLHEAARYGRASVVHVLLKNGADLNIKDRRGNT 434
GR +V+ L + +L IR D TPLH AA G+ VV L+ A LN D G T
Sbjct: 118 GRLSIVQLLCDKAPEL-IRKKDLQGQTPLHRAAAVGKIQVVKYLISQRAPLNTSDSYGFT 176
Score = 32.7 bits (71), Expect = 0.059
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +3
Query: 264 GRKDVVEALIEAGVDLNIR-TYDGTPLHEAARYGRASVVHVLLKNGADLNIKDRRGNTVY 440
G+ VV+ LI LN +Y TPLH A G V L++ GAD KD +T
Sbjct: 152 GKIQVVKYLISQRAPLNTSDSYGFTPLHFALAEGHPDVGVELVRAGADTLRKDSENHTAL 211
Query: 441 DL 446
++
Sbjct: 212 EV 213
Score = 31.9 bits (69), Expect = 0.10
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +1
Query: 55 DVVAQLMAKG-ADVTVKNISNENALDLAAQYGRLETVKHLLRVRPQLVDQYRHSRRAQVF 231
+V+ +L+ + D T+ + L AA GRL V+ L P+L+ R+ +
Sbjct: 87 NVIEELINRSDVDPTITTRGGQTCLHYAAGKGRLSIVQLLCDKAPELI------RKKDLQ 140
Query: 232 SSTPLHRAA 258
TPLHRAA
Sbjct: 141 GQTPLHRAA 149
>SPCC1827.04 |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 600
Score = 35.1 bits (77), Expect = 0.011
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +3
Query: 312 NIRTYDGTPLHEAARYGRASVVHVLLKNGADLNIKDRRGNTVYDL 446
N+ + TPLH A A +V LL+NGAD + + G T +++
Sbjct: 428 NVHLHTSTPLHYAVTQKNAKLVAKLLRNGADPAMLNGNGKTPFEI 472
>SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1151
Score = 33.5 bits (73), Expect = 0.034
Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +3
Query: 288 LIEAGVDLNIRTYDG-TPLHEAARYGRASVVHVLLKNGADLNIKDRRGNTVYDLLS 452
L AG D+N R G TPLH A+ Y + LL NGA ++ G DL S
Sbjct: 881 LCNAGCDVNKRDALGYTPLHYASLYDHKDICVNLLSNGAKPDVIGASGKKPIDLSS 936
>SPBC211.08c |||ribonuclease PH-like|Schizosaccharomyces pombe|chr
2|||Manual
Length = 257
Score = 29.5 bits (63), Expect = 0.55
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +2
Query: 563 PTPTKAPEFQQNTKNHC--LLSPSSSSLTKNHQQSFVLKACFEMLGVLRRNSILV 721
P P+K F+ + K +C LSP S+S+ + H Q+ K+ +M+ SIL+
Sbjct: 68 PRPSKTFAFRSSAKLNCEFRLSPFSTSVRQGHVQTVEEKSYSQMIEAAISPSILL 122
>SPCC1322.13 |ade6|min1|phosphoribosylaminoimidazole carboxylase
Ade6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 552
Score = 29.1 bits (62), Expect = 0.73
Identities = 15/60 (25%), Positives = 27/60 (45%)
Frame = +3
Query: 216 EGASVLVDAAAPRSKHGRKDVVEALIEAGVDLNIRTYDGTPLHEAARYGRASVVHVLLKN 395
+G ++L++ APR + +EA + + ++R G P E S H L+ N
Sbjct: 258 DGETILLNEIAPRPHNSGHYTIEACPTSQFEAHLRAICGLPFSEINTQLSTSTTHALMVN 317
>SPAC13D6.04c |btb3||BTB/POZ domain protein Btb3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 523
Score = 27.9 bits (59), Expect = 1.7
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = +3
Query: 258 KHGRKDVVEALIEA-GVDLN-IRTYDGTPLHEAARYGRASVVHVLLKNGA 401
+ G +VV++L+E +N + +D +PL A+ G VV LL+NGA
Sbjct: 61 RRGDLEVVKSLVENYNTPINQVDQFDYSPLVLASLCGHEPVVKFLLENGA 110
>SPAC18B11.02c |||pseudouridylate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 394
Score = 27.9 bits (59), Expect = 1.7
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3
Query: 330 GTPLHEAARYGRASVVHVLLK 392
G P+H RY +V+H+L+K
Sbjct: 122 GVPVHPTGRYNHNTVLHILMK 142
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 27.1 bits (57), Expect = 3.0
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +2
Query: 527 DEDIPPFPVHECPTPTKAPEFQQNTKNHCLLSPSSSSLTKNHQQSFVLK 673
++D P H +P+ + ++KN+ +P +++LTK +Q+FV K
Sbjct: 79 EDDDDPLKEHITHSPSCPWAYILSSKNNPNQNPQAAALTKCREQTFVDK 127
>SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1016
Score = 26.6 bits (56), Expect = 3.9
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +2
Query: 539 PPF-PVHECPTPTKAPEFQQNTKNHCLLSPSSSSLTKNHQQSF 664
PP+ P PT TK + ++ T+ +L+P +S LTK QQ F
Sbjct: 957 PPYIPSLNSPTDTKYFD-EEFTRELPVLTPVNSILTKEMQQHF 998
>SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2609
Score = 26.6 bits (56), Expect = 3.9
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 558 NVPPLRKLQSSSKILKTIA-C-YHHHLLP*LKIISKVL 665
NV L K+Q K+L + C +H LLP L+++ KVL
Sbjct: 862 NVKRLMKMQILKKLLTAMRNCLFHKDLLPILRLLFKVL 899
>SPBC336.12c |cdc10||MBF transcription factor complex subunit
Cdc10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 767
Score = 25.8 bits (54), Expect = 6.8
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 16 ETALLIAAHFGYVDVVAQLMAKGADVTVKN 105
+TAL IAA G ++V LM GA + N
Sbjct: 485 DTALNIAARIGNKNIVEVLMQAGASAYIPN 514
>SPAPB1E7.02c |mcl1|slr3|DNA polymerase alpha accessory factor
Mcl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 25.4 bits (53), Expect = 9.0
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -3
Query: 509 LFKFSNHFPYFPRGLFRE 456
L K ++ +PYFPR +F E
Sbjct: 680 LLKGASRYPYFPRPMFTE 697
>SPAC630.13c |tsc2||tuberin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1339
Score = 25.4 bits (53), Expect = 9.0
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = -3
Query: 551 PETEVCLRRFRLICLFKFSNHFPY-FPRGLFREQRQQIVDRVAAAILDVQVGSVLQEHMD 375
PE+E R R I +K Y LFR + D + A + DV + + + H+
Sbjct: 1223 PESESIRRTGRQIKFYKVKALTKYDIDFSLFRRYKIVSSDALPAIVRDVTLNAAVFSHIY 1282
Query: 374 HR 369
HR
Sbjct: 1283 HR 1284
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,965,970
Number of Sequences: 5004
Number of extensions: 58563
Number of successful extensions: 194
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 193
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 369323696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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