Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0054
         (769 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    25   1.0  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    25   1.0  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
            isoform B protein.
          Length = 931

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
 Frame = -3

Query: 458  EQRQQIVDRVAAAILDVQVGSVLQEHMDHRGPAIARG--LVKRGTVVRPDVQVNSGLYQS 285
            E  QQ   R + ++ +V    + +   D R PA+A      +RGTVV P       +   
Sbjct: 857  ESIQQKAKR-SKSLQEVSSDKLQESSTDSRNPALALAEPYNQRGTVVSPPPTKRRTMKVV 915

Query: 284  LYHVF 270
             YH+F
Sbjct: 916  KYHLF 920


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
            isoform A protein.
          Length = 969

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
 Frame = -3

Query: 458  EQRQQIVDRVAAAILDVQVGSVLQEHMDHRGPAIARG--LVKRGTVVRPDVQVNSGLYQS 285
            E  QQ   R + ++ +V    + +   D R PA+A      +RGTVV P       +   
Sbjct: 895  ESIQQKAKR-SKSLQEVSSDKLQESSTDSRNPALALAEPYNQRGTVVSPPPTKRRTMKVV 953

Query: 284  LYHVF 270
             YH+F
Sbjct: 954  KYHLF 958


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,926
Number of Sequences: 438
Number of extensions: 4401
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)