Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0053
         (605 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL031597-2|CAI23555.1| 3014|Homo sapiens cadherin, EGF LAG seven...    31   2.4  
AL031588-3|CAI19319.1| 3014|Homo sapiens cadherin, EGF LAG seven...    31   2.4  
AL021392-2|CAI20967.1| 3014|Homo sapiens cadherin, EGF LAG seven...    31   2.4  
AF231024-1|AAF61930.1| 3014|Homo sapiens protocadherin Flamingo ...    31   2.4  
AY140955-1|AAN46669.1| 1079|Homo sapiens G-protein coupled recep...    31   4.2  
AC010896-3|AAY14645.1| 1079|Homo sapiens unknown protein.              31   4.2  
AB065959-1|BAC45265.1|  990|Homo sapiens seven transmembrane hel...    31   4.2  
M69008-1|AAA52754.1|  623|Homo sapiens alpha-1 type XIII collage...    29   9.6  

>AL031597-2|CAI23555.1| 3014|Homo sapiens cadherin, EGF LAG seven-pass
            G-type receptor 1 (flamingo homolog, Drosophila) protein.
          Length = 3014

 Score = 31.5 bits (68), Expect = 2.4
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +3

Query: 408  PHKXXTRPSCTRPRGGTKTEAPINRKR 488
            P    T P  TRP  GT+ EAPI+R+R
Sbjct: 2301 PAGRRTTPQTTRPGPGTEREAPISRRR 2327


>AL031588-3|CAI19319.1| 3014|Homo sapiens cadherin, EGF LAG seven-pass
            G-type receptor 1 (flamingo homolog, Drosophila) protein.
          Length = 3014

 Score = 31.5 bits (68), Expect = 2.4
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +3

Query: 408  PHKXXTRPSCTRPRGGTKTEAPINRKR 488
            P    T P  TRP  GT+ EAPI+R+R
Sbjct: 2301 PAGRRTTPQTTRPGPGTEREAPISRRR 2327


>AL021392-2|CAI20967.1| 3014|Homo sapiens cadherin, EGF LAG seven-pass
            G-type receptor 1 (flamingo homolog, Drosophila) protein.
          Length = 3014

 Score = 31.5 bits (68), Expect = 2.4
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +3

Query: 408  PHKXXTRPSCTRPRGGTKTEAPINRKR 488
            P    T P  TRP  GT+ EAPI+R+R
Sbjct: 2301 PAGRRTTPQTTRPGPGTEREAPISRRR 2327


>AF231024-1|AAF61930.1| 3014|Homo sapiens protocadherin Flamingo 2
            protein.
          Length = 3014

 Score = 31.5 bits (68), Expect = 2.4
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +3

Query: 408  PHKXXTRPSCTRPRGGTKTEAPINRKR 488
            P    T P  TRP  GT+ EAPI+R+R
Sbjct: 2301 PAGRRTTPQTTRPGPGTEREAPISRRR 2327


>AY140955-1|AAN46669.1| 1079|Homo sapiens G-protein coupled receptor
           GPR113 protein.
          Length = 1079

 Score = 30.7 bits (66), Expect = 4.2
 Identities = 13/33 (39%), Positives = 23/33 (69%)
 Frame = +3

Query: 63  LSRAQTLSSETPLANPSPLLSGCRISPEGNISN 161
           LSR  TL + +  ++P PLL+G R++ E N+++
Sbjct: 141 LSRTLTLPAASASSSPRPLLTGLRLTTECNVNH 173


>AC010896-3|AAY14645.1| 1079|Homo sapiens unknown protein.
          Length = 1079

 Score = 30.7 bits (66), Expect = 4.2
 Identities = 13/33 (39%), Positives = 23/33 (69%)
 Frame = +3

Query: 63  LSRAQTLSSETPLANPSPLLSGCRISPEGNISN 161
           LSR  TL + +  ++P PLL+G R++ E N+++
Sbjct: 141 LSRTLTLPAASASSSPRPLLTGLRLTTECNVNH 173


>AB065959-1|BAC45265.1|  990|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 990

 Score = 30.7 bits (66), Expect = 4.2
 Identities = 13/33 (39%), Positives = 23/33 (69%)
 Frame = +3

Query: 63  LSRAQTLSSETPLANPSPLLSGCRISPEGNISN 161
           LSR  TL + +  ++P PLL+G R++ E N+++
Sbjct: 32  LSRTLTLPAASASSSPRPLLTGLRLTTECNVNH 64


>M69008-1|AAA52754.1|  623|Homo sapiens alpha-1 type XIII collagen
           protein.
          Length = 623

 Score = 29.5 bits (63), Expect = 9.6
 Identities = 17/39 (43%), Positives = 20/39 (51%)
 Frame = -2

Query: 118 KGEGFAKGVSLERVCARERAAPGDSVDGVLGVERPYPPP 2
           KGE    G   E+  A E+  PG  V G+LG E P  PP
Sbjct: 447 KGETGQAGSPGEKGEAGEKGNPGAEVPGLLGPEGPPGPP 485


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,439,031
Number of Sequences: 237096
Number of extensions: 1946436
Number of successful extensions: 6530
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6514
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6410414940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)