Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0052
(779 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B503E Cluster: PREDICTED: similar to splicing f... 178 1e-43
UniRef50_UPI0000EBDD2E Cluster: PREDICTED: similar to splicing f... 125 1e-27
UniRef50_P26368 Cluster: Splicing factor U2AF 65 kDa subunit (U2... 125 1e-27
UniRef50_P90978 Cluster: Splicing factor U2AF 65 kDa subunit; n=... 120 4e-26
UniRef50_UPI000065F936 Cluster: Splicing factor U2AF 65 kDa subu... 101 2e-20
UniRef50_Q8T8Y4 Cluster: AT16577p; n=3; Sophophora|Rep: AT16577p... 92 1e-17
UniRef50_Q4SAX3 Cluster: Chromosome 3 SCAF14679, whole genome sh... 89 9e-17
UniRef50_UPI0000F2E898 Cluster: PREDICTED: similar to U2 (RNU2) ... 86 8e-16
UniRef50_Q4TF95 Cluster: Chromosome undetermined SCAF4753, whole... 80 5e-14
UniRef50_Q4P3F0 Cluster: Putative uncharacterized protein; n=3; ... 72 2e-11
UniRef50_Q54LV5 Cluster: RNA-binding region-containing protein; ... 61 3e-08
UniRef50_Q3E9P9 Cluster: Uncharacterized protein At4g36690.3; n=... 59 1e-07
UniRef50_O23212 Cluster: Splicing factor-like protein; n=22; Euk... 59 1e-07
UniRef50_UPI0000498FCC Cluster: U2 snRNP auxiliary factor large ... 58 2e-07
UniRef50_Q10S20 Cluster: RNA recognition motif family protein, e... 58 3e-07
UniRef50_A5K369 Cluster: U2 snRNP auxiliary factor, putative; n=... 54 5e-06
UniRef50_A7NXF8 Cluster: Chromosome chr5 scaffold_2, whole genom... 52 2e-05
UniRef50_Q5KFM4 Cluster: RRNA primary transcript binding protein... 51 4e-05
UniRef50_A7AR94 Cluster: Putative uncharacterized protein; n=1; ... 49 1e-04
UniRef50_Q0UUV3 Cluster: Putative uncharacterized protein; n=1; ... 49 2e-04
UniRef50_A7AU39 Cluster: RNA recognition motif (RRM)-containing ... 48 3e-04
UniRef50_Q3EBP3 Cluster: Uncharacterized protein At2g33435.1; n=... 47 5e-04
UniRef50_Q8IBU0 Cluster: Putative uncharacterized protein PF07_0... 46 8e-04
UniRef50_A0EAC5 Cluster: Chromosome undetermined scaffold_86, wh... 46 0.001
UniRef50_Q4UCN0 Cluster: Snrnp splicing factor (U2AF), putative;... 45 0.002
UniRef50_A4VDP3 Cluster: Putative uncharacterized protein; n=1; ... 45 0.002
UniRef50_Q7RNT2 Cluster: 19096-22891; n=6; Plasmodium|Rep: 19096... 45 0.002
UniRef50_Q5CSE3 Cluster: Splicing factor U2AF like SnRNP auxilar... 45 0.002
UniRef50_Q5C2P7 Cluster: SJCHGC09464 protein; n=1; Schistosoma j... 45 0.002
UniRef50_A5KAH2 Cluster: Putative uncharacterized protein; n=1; ... 45 0.002
UniRef50_Q4UHC8 Cluster: Splicing factor, putative; n=3; Piropla... 44 0.004
UniRef50_A4RFH0 Cluster: Putative uncharacterized protein; n=4; ... 42 0.017
UniRef50_Q5CXC0 Cluster: Splicing factor U2AF U2 snRNP auxiliary... 42 0.023
UniRef50_UPI00006CBD24 Cluster: hypothetical protein TTHERM_0015... 41 0.030
UniRef50_Q4N3F2 Cluster: U2 small nuclear ribonucleoprotein, aux... 41 0.040
UniRef50_A2QMQ0 Cluster: Contig An07c0080, complete genome; n=11... 40 0.070
UniRef50_A0CGK9 Cluster: Chromosome undetermined scaffold_18, wh... 40 0.092
UniRef50_Q7RQR4 Cluster: KED; n=3; Plasmodium (Vinckeia)|Rep: KE... 39 0.16
UniRef50_Q00YN9 Cluster: RNA recognition motif; n=2; Ostreococcu... 38 0.37
UniRef50_A2Q4R3 Cluster: RNA-binding region RNP-1; n=2; core eud... 38 0.37
UniRef50_Q9LNP1 Cluster: F1L3.34; n=2; Arabidopsis thaliana|Rep:... 37 0.65
UniRef50_Q9NCC0 Cluster: Enhancer binding protein-2; n=2; Entamo... 36 0.86
UniRef50_A2AEK1 Cluster: Cleavage stimulation factor, 3' pre-RNA... 36 1.1
UniRef50_O22794 Cluster: Putative splicing factor U2AF large cha... 36 1.1
UniRef50_A1CA44 Cluster: RNP domain protein; n=13; Pezizomycotin... 36 1.1
UniRef50_A7S854 Cluster: Predicted protein; n=4; Nematostella ve... 35 2.0
UniRef50_Q9A421 Cluster: Putative uncharacterized protein; n=3; ... 35 2.6
UniRef50_Q2U8W5 Cluster: Predicted protein; n=1; Aspergillus ory... 35 2.6
UniRef50_A0UX43 Cluster: Extracellular solute-binding protein, f... 34 3.5
UniRef50_Q6C1Y4 Cluster: Similarities with sp|P34761 Saccharomyc... 34 3.5
UniRef50_Q3R372 Cluster: Putative uncharacterized protein; n=2; ... 34 4.6
UniRef50_Q0UE30 Cluster: Putative uncharacterized protein; n=1; ... 34 4.6
UniRef50_UPI0000499611 Cluster: enhancer binding protein 2-relat... 33 6.1
UniRef50_A7PJ01 Cluster: Chromosome chr13 scaffold_17, whole gen... 33 6.1
UniRef50_UPI0000515DAB Cluster: PREDICTED: similar to Polyadenyl... 33 8.0
UniRef50_A5GEF6 Cluster: RNP-1 like RNA-binding protein; n=1; Ge... 33 8.0
UniRef50_Q00WA2 Cluster: DNA-directed RNA polymerase; n=2; Ostre... 33 8.0
UniRef50_Q5CFP8 Cluster: Poly(A) binding protein II; n=2; Crypto... 33 8.0
UniRef50_Q00880 Cluster: Cutinase negative acting protein; n=2; ... 33 8.0
>UniRef50_UPI00015B503E Cluster: PREDICTED: similar to splicing
factor u2af large subunit; n=2; Apocrita|Rep: PREDICTED:
similar to splicing factor u2af large subunit - Nasonia
vitripennis
Length = 547
Score = 178 bits (434), Expect = 1e-43
Identities = 85/86 (98%), Positives = 85/86 (98%)
Frame = +3
Query: 252 GFEHITPLQYKAMQAAGQIPANIVADTPQAAVPVVGSTITRQARRLYVGNIPFGVTEEET 431
GFEHITPLQYKAMQAAGQIPANIVADTPQAAVPVVGSTITRQARRLYVGNIPFGVTEEE
Sbjct: 193 GFEHITPLQYKAMQAAGQIPANIVADTPQAAVPVVGSTITRQARRLYVGNIPFGVTEEEM 252
Query: 432 MEFFNQQMHLSGLAQAAGNPVLACQI 509
MEFFNQQMHLSGLAQAAGNPVLACQI
Sbjct: 253 MEFFNQQMHLSGLAQAAGNPVLACQI 278
Score = 114 bits (274), Expect = 3e-24
Identities = 53/63 (84%), Positives = 56/63 (88%), Gaps = 1/63 (1%)
Frame = +2
Query: 488 PCFGLPDNLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPMPG-TENPAI 664
P NLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPMPG T+NP++
Sbjct: 272 PVLACQINLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPMPGMTDNPSM 331
Query: 665 NVP 673
NVP
Sbjct: 332 NVP 334
Score = 48.8 bits (111), Expect = 2e-04
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +1
Query: 700 DSPHKIFIGGLPNYLNEDQVK 762
DSPHKIFIGGLPNYLNE+QVK
Sbjct: 335 DSPHKIFIGGLPNYLNEEQVK 355
>UniRef50_UPI0000EBDD2E Cluster: PREDICTED: similar to splicing
factor U2AF homolog - mouse; n=2; Bos taurus|Rep:
PREDICTED: similar to splicing factor U2AF homolog -
mouse - Bos taurus
Length = 330
Score = 125 bits (302), Expect = 1e-27
Identities = 64/94 (68%), Positives = 69/94 (73%), Gaps = 8/94 (8%)
Frame = +3
Query: 252 GFEHITPLQYKAMQAAGQIPANIVADT--------PQAAVPVVGSTITRQARRLYVGNIP 407
GFEHITP+QYKAMQAAGQIPA + T VPVVGS +TRQARRLYVGNIP
Sbjct: 98 GFEHITPMQYKAMQAAGQIPATALLPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIP 157
Query: 408 FGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQI 509
FG+TEE M+FFN QM L GL QA GNPVLA QI
Sbjct: 158 FGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQI 191
Score = 103 bits (246), Expect = 7e-21
Identities = 47/63 (74%), Positives = 54/63 (85%), Gaps = 1/63 (1%)
Frame = +2
Query: 488 PCFGLPDNLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPMPG-TENPAI 664
P + N DKNFAFLEFRS+DETTQAMAFDGI F+GQSLKIRRPHDYQP+PG +ENP++
Sbjct: 185 PVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSV 244
Query: 665 NVP 673
VP
Sbjct: 245 YVP 247
>UniRef50_P26368 Cluster: Splicing factor U2AF 65 kDa subunit (U2
auxiliary factor 65 kDa subunit) (U2 snRNP auxiliary
factor large subunit) (hU2AF(65)); n=44; Eumetazoa|Rep:
Splicing factor U2AF 65 kDa subunit (U2 auxiliary factor
65 kDa subunit) (U2 snRNP auxiliary factor large
subunit) (hU2AF(65)) - Homo sapiens (Human)
Length = 475
Score = 125 bits (302), Expect = 1e-27
Identities = 64/94 (68%), Positives = 69/94 (73%), Gaps = 8/94 (8%)
Frame = +3
Query: 252 GFEHITPLQYKAMQAAGQIPANIVADT--------PQAAVPVVGSTITRQARRLYVGNIP 407
GFEHITP+QYKAMQAAGQIPA + T VPVVGS +TRQARRLYVGNIP
Sbjct: 98 GFEHITPMQYKAMQAAGQIPATALLPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIP 157
Query: 408 FGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQI 509
FG+TEE M+FFN QM L GL QA GNPVLA QI
Sbjct: 158 FGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQI 191
Score = 110 bits (265), Expect = 3e-23
Identities = 53/71 (74%), Positives = 61/71 (85%), Gaps = 1/71 (1%)
Frame = +2
Query: 488 PCFGLPDNLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPMPG-TENPAI 664
P + N DKNFAFLEFRS+DETTQAMAFDGI F+GQSLKIRRPHDYQP+PG +ENP++
Sbjct: 185 PVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSV 244
Query: 665 NVPAGVISTVV 697
VP GV+STVV
Sbjct: 245 YVP-GVVSTVV 254
Score = 45.2 bits (102), Expect = 0.002
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +1
Query: 700 DSPHKIFIGGLPNYLNEDQVK 762
DS HK+FIGGLPNYLN+DQVK
Sbjct: 256 DSAHKLFIGGLPNYLNDDQVK 276
>UniRef50_P90978 Cluster: Splicing factor U2AF 65 kDa subunit; n=7;
Bilateria|Rep: Splicing factor U2AF 65 kDa subunit -
Caenorhabditis elegans
Length = 496
Score = 120 bits (289), Expect = 4e-26
Identities = 57/86 (66%), Positives = 67/86 (77%)
Frame = +3
Query: 252 GFEHITPLQYKAMQAAGQIPANIVADTPQAAVPVVGSTITRQARRLYVGNIPFGVTEEET 431
GFE TP++YK MQAAGQ+P V Q+AVPVVG ++T Q+RRLYVGNIPFG EE
Sbjct: 145 GFETTTPMEYKNMQAAGQVPRGSV----QSAVPVVGPSVTCQSRRLYVGNIPFGCNEEAM 200
Query: 432 MEFFNQQMHLSGLAQAAGNPVLACQI 509
++FFNQQMHL GLAQA GNP+L CQI
Sbjct: 201 LDFFNQQMHLCGLAQAPGNPILLCQI 226
Score = 86.2 bits (204), Expect = 8e-16
Identities = 41/64 (64%), Positives = 48/64 (75%)
Frame = +2
Query: 509 NLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPMPGTENPAINVPAGVIS 688
NLDKNFAF+EFRSIDETT MAFDGINF GQ LK+RRP DYQP T + +P +S
Sbjct: 227 NLDKNFAFIEFRSIDETTAGMAFDGINFMGQQLKVRRPRDYQPSQNTFDMNSRMP---VS 283
Query: 689 TVVL 700
T+V+
Sbjct: 284 TIVV 287
Score = 44.4 bits (100), Expect = 0.003
Identities = 19/25 (76%), Positives = 20/25 (80%)
Frame = +1
Query: 700 DSPHKIFIGGLPNYLNEDQVKNYSC 774
DS +KIFIGGLPNYL EDQVK C
Sbjct: 288 DSANKIFIGGLPNYLTEDQVKELLC 312
>UniRef50_UPI000065F936 Cluster: Splicing factor U2AF 65 kDa subunit
(U2 auxiliary factor 65 kDa subunit) (U2 snRNP auxiliary
factor large subunit) (hU2AF(65)).; n=1; Takifugu
rubripes|Rep: Splicing factor U2AF 65 kDa subunit (U2
auxiliary factor 65 kDa subunit) (U2 snRNP auxiliary
factor large subunit) (hU2AF(65)). - Takifugu rubripes
Length = 555
Score = 101 bits (242), Expect = 2e-20
Identities = 64/120 (53%), Positives = 69/120 (57%), Gaps = 34/120 (28%)
Frame = +3
Query: 252 GFEHITPLQYKAMQ--------------------------AAGQIPANIVADT------- 332
GFEHITP+QYKAMQ AAGQIPA + T
Sbjct: 85 GFEHITPMQYKAMQGTKAGLNTRPSGFSRTRLPFRDARVSAAGQIPATALLPTMTPDGLA 144
Query: 333 -PQAAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQI 509
VPVVGS +TRQARRLYVGNIPFG+TEE M+FFN QM L GL QA GNPVLA QI
Sbjct: 145 VTPTPVPVVGSQMTRQARRLYVGNIPFGITEESMMDFFNAQMRLGGLTQAPGNPVLAVQI 204
Score = 43.2 bits (97), Expect = 0.007
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +1
Query: 700 DSPHKIFIGGLPNYLNEDQV 759
DS HK+FIGGLPNYLN+DQV
Sbjct: 297 DSAHKLFIGGLPNYLNDDQV 316
>UniRef50_Q8T8Y4 Cluster: AT16577p; n=3; Sophophora|Rep: AT16577p -
Drosophila melanogaster (Fruit fly)
Length = 449
Score = 92.3 bits (219), Expect = 1e-17
Identities = 47/90 (52%), Positives = 58/90 (64%), Gaps = 5/90 (5%)
Frame = +3
Query: 252 GFEHITPLQYKAMQAAGQIPANIVADTPQAAVPVVGSTITRQARRLYVGNIPFGVTEEET 431
G+ H+TP Q+KAM A+GQI + I++D S ITRQARRLYVGNIPFGVT+EE
Sbjct: 68 GYNHLTPQQHKAMLASGQIASRILSDGVHGGESAAISMITRQARRLYVGNIPFGVTDEEM 127
Query: 432 MEFFNQQMHLSGLAQAA-----GNPVLACQ 506
M+FFN Q+ G + GN VL CQ
Sbjct: 128 MQFFNHQIMALGFEAKSSHYMDGNAVLTCQ 157
Score = 82.6 bits (195), Expect = 1e-14
Identities = 35/45 (77%), Positives = 42/45 (93%)
Frame = +2
Query: 509 NLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPMP 643
NL+KNFAFLEFRSIDE +QA+ FDG+ F+GQ+LKIRRPHDYQP+P
Sbjct: 159 NLEKNFAFLEFRSIDEASQALNFDGMVFRGQTLKIRRPHDYQPVP 203
Score = 38.7 bits (86), Expect = 0.16
Identities = 15/21 (71%), Positives = 19/21 (90%)
Frame = +1
Query: 700 DSPHKIFIGGLPNYLNEDQVK 762
DSP+KI++GGLP LN+DQVK
Sbjct: 239 DSPNKIYVGGLPTCLNQDQVK 259
>UniRef50_Q4SAX3 Cluster: Chromosome 3 SCAF14679, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 3 SCAF14679, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 600
Score = 89.4 bits (212), Expect = 9e-17
Identities = 64/125 (51%), Positives = 72/125 (57%), Gaps = 39/125 (31%)
Frame = +3
Query: 252 GFEHITPLQYKAMQ----------------------AAGQIPANIVADTPQAA------- 344
GFEHITPLQYKAMQ AAGQIP + T +A
Sbjct: 96 GFEHITPLQYKAMQGRAPPRLPGPAPRLPSVSLWPPAAGQIPTMALLATAASAGVVAAPT 155
Query: 345 -VPVVGSTITRQARRLYVGNIPFGVTE--------EETM-EFFNQQMHLSGLAQAAGNPV 494
VPV GS +TRQARRLYVGNIPFG+TE +E+M EFFN QM L+GL+QA NPV
Sbjct: 156 PVPVAGSQMTRQARRLYVGNIPFGLTEALRRLCSPQESMAEFFNAQMRLAGLSQAPSNPV 215
Query: 495 LACQI 509
LA QI
Sbjct: 216 LAVQI 220
Score = 46.4 bits (105), Expect = 8e-04
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +1
Query: 700 DSPHKIFIGGLPNYLNEDQV 759
DSPHK+FIGGLPNYLN+DQV
Sbjct: 325 DSPHKLFIGGLPNYLNDDQV 344
>UniRef50_UPI0000F2E898 Cluster: PREDICTED: similar to U2 (RNU2)
small nuclear RNA auxiliary factor 2,; n=1; Monodelphis
domestica|Rep: PREDICTED: similar to U2 (RNU2) small
nuclear RNA auxiliary factor 2, - Monodelphis domestica
Length = 386
Score = 86.2 bits (204), Expect = 8e-16
Identities = 44/65 (67%), Positives = 48/65 (73%), Gaps = 8/65 (12%)
Frame = +3
Query: 252 GFEHITPLQYKAMQAAGQIPANIVADT--------PQAAVPVVGSTITRQARRLYVGNIP 407
GFEHITP+QYKAMQAAGQIPA + T VPVVGS +TRQARRLYVGNIP
Sbjct: 98 GFEHITPMQYKAMQAAGQIPATALLPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIP 157
Query: 408 FGVTE 422
FG+TE
Sbjct: 158 FGITE 162
Score = 45.2 bits (102), Expect = 0.002
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +1
Query: 700 DSPHKIFIGGLPNYLNEDQVK 762
DS HK+FIGGLPNYLN+DQVK
Sbjct: 259 DSAHKLFIGGLPNYLNDDQVK 279
>UniRef50_Q4TF95 Cluster: Chromosome undetermined SCAF4753, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF4753,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 351
Score = 80.2 bits (189), Expect = 5e-14
Identities = 35/47 (74%), Positives = 43/47 (91%), Gaps = 1/47 (2%)
Frame = +2
Query: 536 EFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPMPG-TENPAINVP 673
+FRS+DETTQAMAFDGI F+GQ+LKIRRPHDY+P+PG +E PA +VP
Sbjct: 233 QFRSVDETTQAMAFDGIVFQGQALKIRRPHDYRPLPGISEQPAFHVP 279
Score = 66.9 bits (156), Expect = 5e-10
Identities = 44/82 (53%), Positives = 48/82 (58%), Gaps = 18/82 (21%)
Frame = +3
Query: 231 LLGCTAAGFEHITPLQYKAMQ----------AAGQIPANIVADTPQ--------AAVPVV 356
+LG GFEHITPLQYKAMQ AAGQIP A + VPV
Sbjct: 72 VLGRPPPGFEHITPLQYKAMQGLPSVSLWPPAAGQIPNYGAAGHGRQRGRGGAPTPVPVA 131
Query: 357 GSTITRQARRLYVGNIPFGVTE 422
GS +TRQARRLYVGN PFG+TE
Sbjct: 132 GSQMTRQARRLYVGNNPFGLTE 153
>UniRef50_Q4P3F0 Cluster: Putative uncharacterized protein; n=3;
Fungi/Metazoa group|Rep: Putative uncharacterized
protein - Ustilago maydis (Smut fungus)
Length = 727
Score = 71.7 bits (168), Expect = 2e-11
Identities = 43/86 (50%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Frame = +2
Query: 443 QSTNASIGPGPGRRQPCFGLPDNLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRP 622
Q +G PG +P N+DK +AF+EFR +E T AM+FDGI F+ QSLKIRRP
Sbjct: 376 QMLKLKLGTEPG--EPAVSAQVNVDKGYAFVEFRHPEEATNAMSFDGIVFQAQSLKIRRP 433
Query: 623 HDYQPMPGTENPA-INVPAGVISTVV 697
DY P P+ I+VP GVIST V
Sbjct: 434 KDYTG-PDIRPPSNIHVP-GVISTNV 457
Score = 45.2 bits (102), Expect = 0.002
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = +3
Query: 372 RQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQI 509
RQARRLYVGNI E+ + FFN+QM L G P ++ Q+
Sbjct: 350 RQARRLYVGNITHQANEQNIVAFFNEQMLKLKLGTEPGEPAVSAQV 395
Score = 44.4 bits (100), Expect = 0.003
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +1
Query: 700 DSPHKIFIGGLPNYLNEDQV 759
DSPHKIF+GGLP YLN+DQV
Sbjct: 459 DSPHKIFVGGLPTYLNDDQV 478
>UniRef50_Q54LV5 Cluster: RNA-binding region-containing protein;
n=1; Dictyostelium discoideum AX4|Rep: RNA-binding
region-containing protein - Dictyostelium discoideum AX4
Length = 671
Score = 60.9 bits (141), Expect = 3e-08
Identities = 33/68 (48%), Positives = 39/68 (57%)
Frame = +2
Query: 431 NGVFQSTNASIGPGPGRRQPCFGLPDNLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLK 610
N + N + PGP P N K FAF+EFRS +E T AM FDGI+ K +LK
Sbjct: 289 NAAVLAANLNTKPGP----PVVFCQINAPKCFAFIEFRSPEEATNAMRFDGISLKNFTLK 344
Query: 611 IRRPHDYQ 634
IRRP DYQ
Sbjct: 345 IRRPKDYQ 352
Score = 52.8 bits (121), Expect = 9e-06
Identities = 23/46 (50%), Positives = 32/46 (69%)
Frame = +3
Query: 372 RQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQI 509
+Q+RR+YVGNIP G+++ E MEFFN + + L G PV+ CQI
Sbjct: 265 KQSRRIYVGNIPPGISDSELMEFFNAAVLAANLNTKPGPPVVFCQI 310
Score = 33.9 bits (74), Expect = 4.6
Identities = 13/22 (59%), Positives = 20/22 (90%)
Frame = +1
Query: 700 DSPHKIFIGGLPNYLNEDQVKN 765
DS +KI++GGLP+ L+E+QVK+
Sbjct: 375 DSENKIYVGGLPSNLSEEQVKS 396
>UniRef50_Q3E9P9 Cluster: Uncharacterized protein At4g36690.3; n=9;
Magnoliophyta|Rep: Uncharacterized protein At4g36690.3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 565
Score = 58.8 bits (136), Expect = 1e-07
Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Frame = +2
Query: 509 NLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQP-MPGTENPAINVPAGVI 685
N +K FAF+E RS++E + AM+ DGI F+G +K+RRP DY P + T P+ P +
Sbjct: 283 NHEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPSPHLNL 342
Query: 686 STVVLIP 706
+ V L P
Sbjct: 343 AAVGLTP 349
>UniRef50_O23212 Cluster: Splicing factor-like protein; n=22;
Eukaryota|Rep: Splicing factor-like protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 573
Score = 58.8 bits (136), Expect = 1e-07
Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Frame = +2
Query: 509 NLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQP-MPGTENPAINVPAGVI 685
N +K FAF+E RS++E + AM+ DGI F+G +K+RRP DY P + T P+ P +
Sbjct: 283 NHEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPSPHLNL 342
Query: 686 STVVLIP 706
+ V L P
Sbjct: 343 AAVGLTP 349
>UniRef50_UPI0000498FCC Cluster: U2 snRNP auxiliary factor large
subunit; n=1; Entamoeba histolytica HM-1:IMSS|Rep: U2
snRNP auxiliary factor large subunit - Entamoeba
histolytica HM-1:IMSS
Length = 712
Score = 58.4 bits (135), Expect = 2e-07
Identities = 21/44 (47%), Positives = 35/44 (79%)
Frame = +2
Query: 509 NLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPM 640
N ++++AFLEFR+++E +A++ DG+ KG S+K+RRP DY P+
Sbjct: 187 NYERSYAFLEFRTLEEAVKALSLDGLTIKGASVKVRRPKDYNPV 230
>UniRef50_Q10S20 Cluster: RNA recognition motif family protein,
expressed; n=7; Oryza sativa|Rep: RNA recognition motif
family protein, expressed - Oryza sativa subsp. japonica
(Rice)
Length = 964
Score = 57.6 bits (133), Expect = 3e-07
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +2
Query: 482 RQPCFGLPDNLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPMPGTENPA 661
+QPC N DK AF+EF + ++ T A++FDG +F G SLKIRRP +Y M
Sbjct: 510 KQPCLSCVINKDKRQAFVEFLTPEDATAALSFDGRSFGGSSLKIRRPKEYVEMAHVAPKK 569
Query: 662 INVPAGVISTVVL-IPH 709
+ +IS VV PH
Sbjct: 570 PSEEIKLISDVVADSPH 586
>UniRef50_A5K369 Cluster: U2 snRNP auxiliary factor, putative; n=5;
Plasmodium|Rep: U2 snRNP auxiliary factor, putative -
Plasmodium vivax
Length = 914
Score = 53.6 bits (123), Expect = 5e-06
Identities = 24/54 (44%), Positives = 34/54 (62%)
Frame = +2
Query: 509 NLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPMPGTENPAINV 670
N++ F FLEFRS++ T + D I+F L+I RPHD+ P PG + PA+ V
Sbjct: 596 NVESRFCFLEFRSLEITWLCLRLDAISFNNYCLRIARPHDFVPPPGGD-PALTV 648
Score = 33.1 bits (72), Expect = 8.0
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +3
Query: 372 RQARRLYVGNIPFGVTEEETMEFFNQQM 455
++ R+LY+GNIP +EE ++FFN +
Sbjct: 541 KKQRKLYIGNIPPNSKQEELIDFFNNTL 568
>UniRef50_A7NXF8 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr5 scaffold_2, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 902
Score = 52.0 bits (119), Expect = 2e-05
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +2
Query: 488 PCFGLPDNLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPM-PGTENPAI 664
PC + +K A +EF + ++ + A++FDGI+F G LKIRRP D+ M G + +
Sbjct: 464 PCISCIIHKEKGQALVEFLTPEDASAALSFDGISFSGSILKIRRPKDFVDMVTGVQEKLV 523
Query: 665 NVPAGVISTVVLIPH 709
P + V PH
Sbjct: 524 AAPDAISDIVKDSPH 538
Score = 35.9 bits (79), Expect = 1.1
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 369 TRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGN-PVLACQI 509
TR RRLYV N+P +E+ ME N + SG+ G P ++C I
Sbjct: 423 TRPMRRLYVENLPVSSSEKALMECLNNFLLSSGINHVQGTPPCISCII 470
>UniRef50_Q5KFM4 Cluster: RRNA primary transcript binding protein,
putative; n=2; Filobasidiella neoformans|Rep: RRNA
primary transcript binding protein, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 651
Score = 50.8 bits (116), Expect = 4e-05
Identities = 22/56 (39%), Positives = 32/56 (57%)
Frame = +2
Query: 464 GPGPGRRQPCFGLPDNLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDY 631
G G+ P N D+NFAF+E + ++ T A+ DG+ G SL++RRP DY
Sbjct: 303 GMADGKEDPVKQCQINNDRNFAFIELHTPEQATAALELDGVVLDGASLRVRRPKDY 358
Score = 44.0 bits (99), Expect = 0.004
Identities = 26/68 (38%), Positives = 34/68 (50%)
Frame = +3
Query: 306 IPANIVADTPQAAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAG 485
IPA VA + PV RQ RLY+G I + E++ +FFN M G+A
Sbjct: 256 IPATFVAGAFPPSNPV------RQNNRLYIGGIKEDMQEQQIQDFFNNLMKEKGMADGKE 309
Query: 486 NPVLACQI 509
+PV CQI
Sbjct: 310 DPVKQCQI 317
Score = 38.7 bits (86), Expect = 0.16
Identities = 14/20 (70%), Positives = 19/20 (95%)
Frame = +1
Query: 700 DSPHKIFIGGLPNYLNEDQV 759
DSP+K+FIGG+P YLN++QV
Sbjct: 378 DSPNKLFIGGIPTYLNDEQV 397
>UniRef50_A7AR94 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 400
Score = 49.2 bits (112), Expect = 1e-04
Identities = 26/81 (32%), Positives = 41/81 (50%)
Frame = +2
Query: 431 NGVFQSTNASIGPGPGRRQPCFGLPDNLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLK 610
N + N + PG PC + D ++AF+E R+++E + + GIN+ SL+
Sbjct: 46 NDALTAVNGTSIPG----NPCQKGWISADSHYAFVEMRTMEEASNCIQLSGINYMNYSLR 101
Query: 611 IRRPHDYQPMPGTENPAINVP 673
I RP Y P TE P+ +P
Sbjct: 102 INRPKTYNPEILTEAPSPTIP 122
>UniRef50_Q0UUV3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 606
Score = 48.8 bits (111), Expect = 2e-04
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 14/101 (13%)
Frame = +3
Query: 249 AGFEHITPLQYK---------AMQAAGQIPANIVA----DTPQAAVPVVGSTITRQARRL 389
AG+E+IT Q K A +AA P+ + A A+ + ++Q++RL
Sbjct: 229 AGYENITAEQAKLSGMFPLPGAPRAAPMDPSKLAAFMSPSAGTASAAALAPGASKQSKRL 288
Query: 390 YVGNIPFGVTEEETMEFFNQQMHLSGLAQAAG-NPVLACQI 509
YV N+P G T EE +EFFN Q L+GL +G +P L+ QI
Sbjct: 289 YVHNLPSGTTSEELLEFFNLQ--LNGLNVVSGQDPCLSAQI 327
Score = 37.1 bits (82), Expect = 0.49
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 7/79 (8%)
Frame = +2
Query: 482 RQPCFGLPDNLDKNFAFLEFRSIDETTQAMAFDGINFKG-------QSLKIRRPHDYQPM 640
+ PC K +A LEF++ ++ T A+A GI+ + L IRRP DY
Sbjct: 319 QDPCLSAQIASSKTYAALEFKTPEDATVALAMSGISMRDDGGGPDRSGLSIRRPKDYITP 378
Query: 641 PGTENPAINVPAGVISTVV 697
EN P +S+VV
Sbjct: 379 SADENA---YPGDEVSSVV 394
>UniRef50_A7AU39 Cluster: RNA recognition motif (RRM)-containing
protein; n=1; Babesia bovis|Rep: RNA recognition motif
(RRM)-containing protein - Babesia bovis
Length = 383
Score = 48.0 bits (109), Expect = 3e-04
Identities = 23/54 (42%), Positives = 31/54 (57%)
Frame = +2
Query: 509 NLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPMPGTENPAINV 670
N D+ + FLEF + + DGINFKG+ LKIRRP DY +E+ + V
Sbjct: 106 NEDQGYCFLEFSTPELADACFKLDGINFKGKLLKIRRPIDYGTTSSSEDTKVFV 159
>UniRef50_Q3EBP3 Cluster: Uncharacterized protein At2g33435.1; n=2;
Arabidopsis thaliana|Rep: Uncharacterized protein
At2g33435.1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 979
Score = 47.2 bits (107), Expect = 5e-04
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = +2
Query: 485 QPCFGLPDNLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDY 631
+PC N +K+ A +EF + + + A++ DG +F G +LKIRRP DY
Sbjct: 914 EPCISCIINKEKSQALVEFLTPQDASAALSLDGCSFAGSNLKIRRPKDY 962
Score = 36.3 bits (80), Expect = 0.86
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +3
Query: 369 TRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGN-PVLACQI 509
TR+ RRLY N+P +E+ +E FN M SG G+ P ++C I
Sbjct: 874 TRRMRRLYAENVPDSASEKSLIECFNGYMLSSGSNHIKGSEPCISCII 921
>UniRef50_Q8IBU0 Cluster: Putative uncharacterized protein
PF07_0066; n=3; Plasmodium|Rep: Putative uncharacterized
protein PF07_0066 - Plasmodium falciparum (isolate 3D7)
Length = 1125
Score = 46.4 bits (105), Expect = 8e-04
Identities = 21/54 (38%), Positives = 33/54 (61%)
Frame = +2
Query: 515 DKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPMPGTENPAINVPA 676
D ++AF+EFR+I +T+ M +GINF G +L+I RP + + P +PA
Sbjct: 697 DTHYAFVEFRNIQDTSNCMLLNGINFYGNNLRIGRPKTFPIEYHSLIPQATIPA 750
>UniRef50_A0EAC5 Cluster: Chromosome undetermined scaffold_86, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_86,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 402
Score = 46.0 bits (104), Expect = 0.001
Identities = 19/45 (42%), Positives = 30/45 (66%)
Frame = +2
Query: 518 KNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPMPGTE 652
+ + F++FRSI+ET A+ D IN++G+ LK +R DY+ P E
Sbjct: 134 QKYCFVQFRSIEETEAALQIDTINYQGKPLKFKRVKDYEISPRIE 178
Score = 35.9 bits (79), Expect = 1.1
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 378 ARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQI 509
A RLY+GN+P V ++ + QQM G G+PV+ Q+
Sbjct: 87 AVRLYLGNLPDNVDKDHLHNYIRQQMESHGAVLDPGDPVIQVQL 130
>UniRef50_Q4UCN0 Cluster: Snrnp splicing factor (U2AF), putative;
n=2; Theileria|Rep: Snrnp splicing factor (U2AF),
putative - Theileria annulata
Length = 486
Score = 45.2 bits (102), Expect = 0.002
Identities = 24/81 (29%), Positives = 40/81 (49%)
Frame = +2
Query: 431 NGVFQSTNASIGPGPGRRQPCFGLPDNLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLK 610
N S N + PG PC + D ++AF+E R+++E + M G+N G ++K
Sbjct: 125 NQALISVNGTSMPG----NPCLKGWISSDGHYAFIELRTMEEASNCMQLTGLNIMGHNIK 180
Query: 611 IRRPHDYQPMPGTENPAINVP 673
+ RP Y ++ P+ VP
Sbjct: 181 VNRPKTYDADVFSKAPSPTVP 201
>UniRef50_A4VDP3 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 471
Score = 45.2 bits (102), Expect = 0.002
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +2
Query: 524 FAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPMPGTENP-AINVP 673
FAF E RSI+ETT + DGI + L+IRRP +Y+ P + N+P
Sbjct: 85 FAFTELRSIEETTALLQLDGIILWHRQLRIRRPTEYEKFPKVQGQFEANIP 135
Score = 37.9 bits (84), Expect = 0.28
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +3
Query: 372 RQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQ---AAGNPVLACQI 509
R ARRLY+GNIP + +E E+ + + +G Q + NP++ C+I
Sbjct: 31 RHARRLYIGNIPETINQEYLSEWLYRSLEAAGGLQPSLPSENPIVKCEI 79
>UniRef50_Q7RNT2 Cluster: 19096-22891; n=6; Plasmodium|Rep:
19096-22891 - Plasmodium yoelii yoelii
Length = 546
Score = 44.8 bits (101), Expect = 0.002
Identities = 17/37 (45%), Positives = 28/37 (75%)
Frame = +2
Query: 521 NFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDY 631
N+ F+EF +++ET +A+ DG+ KG ++KI RP+DY
Sbjct: 311 NYGFVEFSTVEETEKALTMDGMLCKGIAIKISRPNDY 347
>UniRef50_Q5CSE3 Cluster: Splicing factor U2AF like SnRNP auxilary
factor large subunit, RRM domain; n=2;
Cryptosporidium|Rep: Splicing factor U2AF like SnRNP
auxilary factor large subunit, RRM domain -
Cryptosporidium parvum Iowa II
Length = 330
Score = 44.8 bits (101), Expect = 0.002
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = +2
Query: 521 NFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDY 631
N+ F+EFR+++ET +A+ DG G +K+ RP+DY
Sbjct: 107 NYGFVEFRTVEETEKALQLDGFACMGSKIKVSRPNDY 143
Score = 34.7 bits (76), Expect = 2.6
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +3
Query: 369 TRQARRLYVGNIP--FGVTEEETMEFFNQQMHLSGLA-QAAGNPVL 497
TR+ RRLY GN+P G+TE + Q+M L GL NP+L
Sbjct: 52 TRRFRRLYFGNLPINLGLTESSFQQIVWQEMALRGLCLNPNENPIL 97
>UniRef50_Q5C2P7 Cluster: SJCHGC09464 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09464 protein - Schistosoma
japonicum (Blood fluke)
Length = 159
Score = 44.8 bits (101), Expect = 0.002
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +3
Query: 252 GFEHITPLQYKAMQAAGQIPANIVA 326
GFEH+TP QYKA+Q +GQ+P N+ A
Sbjct: 134 GFEHVTPAQYKALQTSGQVPVNVYA 158
>UniRef50_A5KAH2 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 1050
Score = 44.8 bits (101), Expect = 0.002
Identities = 19/53 (35%), Positives = 32/53 (60%)
Frame = +2
Query: 515 DKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPMPGTENPAINVP 673
D ++AF+EFR++ +T+ M +GINF G +L+I RP + + P +P
Sbjct: 632 DTHYAFVEFRTLQDTSNCMLLNGINFYGNNLRIGRPKTFPTELTSLIPPATIP 684
>UniRef50_Q4UHC8 Cluster: Splicing factor, putative; n=3;
Piroplasmida|Rep: Splicing factor, putative - Theileria
annulata
Length = 425
Score = 44.0 bits (99), Expect = 0.004
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = +2
Query: 521 NFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDY 631
N+ F+EF S++ET +A+ DG+ G L++ RP+DY
Sbjct: 244 NYGFVEFASVEETERALTMDGMTCMGVQLRVSRPNDY 280
>UniRef50_A4RFH0 Cluster: Putative uncharacterized protein; n=4;
Pezizomycotina|Rep: Putative uncharacterized protein -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 620
Score = 41.9 bits (94), Expect = 0.017
Identities = 19/49 (38%), Positives = 33/49 (67%)
Frame = +3
Query: 363 TITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQI 509
T +RQ++RL + N+P G TE+ + F N Q++ + +A+ +P LACQ+
Sbjct: 287 TNSRQSKRLILSNLPAGTTEDSLISFLNLQLNGLNVIEAS-DPCLACQM 334
Score = 38.7 bits (86), Expect = 0.16
Identities = 31/91 (34%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Frame = +2
Query: 488 PCFGLPDNLDKNFAFLEFRSIDETTQAMAFDGINFKGQ-------------SLKIRRPHD 628
PC D +FA +EFRS +TT A A DGI+ + + L +RRP D
Sbjct: 328 PCLACQMAPDGSFAMVEFRSPSDTTVAYALDGISMEAEDAGNGDANGAASKGLAMRRPKD 387
Query: 629 YQPMPGTENPAINVPAGVISTVVLIPHTRSL 721
Y +P + P V S VV PH S+
Sbjct: 388 Y-IVPAVVDDTGYEPGVVSSRVVDTPHKISV 417
>UniRef50_Q5CXC0 Cluster: Splicing factor U2AF U2 snRNP auxiliary
factor large subunit; 3 RRM domains; n=3;
Cryptosporidium|Rep: Splicing factor U2AF U2 snRNP
auxiliary factor large subunit; 3 RRM domains -
Cryptosporidium parvum Iowa II
Length = 492
Score = 41.5 bits (93), Expect = 0.023
Identities = 17/50 (34%), Positives = 31/50 (62%)
Frame = +3
Query: 360 STITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGNPVLACQI 509
S ++ R +YVGN+P G+T E +E+ N+ + + ++ GNPV++ I
Sbjct: 109 SFTSKPLREVYVGNLPQGITVTELLEYINRSIIKNSVSHTNGNPVVSAWI 158
>UniRef50_UPI00006CBD24 Cluster: hypothetical protein
TTHERM_00151210; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00151210 - Tetrahymena
thermophila SB210
Length = 554
Score = 41.1 bits (92), Expect = 0.030
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +2
Query: 542 RSIDETTQAMAFDGINFKGQSLKIRRPHDY 631
RSI+ET+ M DGI +KG+SL+ RRP D+
Sbjct: 255 RSIEETSACMELDGIIYKGKSLRFRRPKDF 284
>UniRef50_Q4N3F2 Cluster: U2 small nuclear ribonucleoprotein,
auxiliary factor, large subunit, putative; n=2;
Theileria|Rep: U2 small nuclear ribonucleoprotein,
auxiliary factor, large subunit, putative - Theileria
parva
Length = 380
Score = 40.7 bits (91), Expect = 0.040
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Frame = +2
Query: 509 NLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPMPGTENPAI---NVPAG 679
N D+ + FLEF++ + A DGI G SLK+RRP D+ +++ + N+P
Sbjct: 103 NPDQGYCFLEFKTPELADLAFKLDGITCNGYSLKLRRPLDFNLGTNSDDTKVFVQNIPLD 162
Query: 680 V 682
V
Sbjct: 163 V 163
>UniRef50_A2QMQ0 Cluster: Contig An07c0080, complete genome; n=11;
Pezizomycotina|Rep: Contig An07c0080, complete genome -
Aspergillus niger
Length = 598
Score = 39.9 bits (89), Expect = 0.070
Identities = 27/80 (33%), Positives = 43/80 (53%)
Frame = +3
Query: 270 PLQYKAMQAAGQIPANIVADTPQAAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQ 449
P+ +QA PA ADT + + +RQA+RL+V NIP VT E + FFN
Sbjct: 220 PMDPSRLQAFMNQPAGGNADTS-----TLKPSNSRQAKRLFVYNIPESVTGETLLAFFNV 274
Query: 450 QMHLSGLAQAAGNPVLACQI 509
Q++ + Q+ +P ++ Q+
Sbjct: 275 QLNGLNVIQSV-DPCISAQV 293
Score = 39.9 bits (89), Expect = 0.070
Identities = 26/68 (38%), Positives = 32/68 (47%), Gaps = 13/68 (19%)
Frame = +2
Query: 488 PCFGLPDNLDKNFAFLEFRSIDETTQAMAFDGI-------------NFKGQSLKIRRPHD 628
PC D FA LEF+S ++ T A+AFDGI N Q L++RRP D
Sbjct: 287 PCISAQVAQDHTFALLEFKSPNDATVALAFDGIAMEEHEAAGNGAANGAAQGLEVRRPKD 346
Query: 629 YQPMPGTE 652
Y G E
Sbjct: 347 YIVPGGAE 354
>UniRef50_A0CGK9 Cluster: Chromosome undetermined scaffold_18, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_18,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 438
Score = 39.5 bits (88), Expect = 0.092
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +2
Query: 521 NFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDY 631
+F F+EFRS +E TQ + FKG LKI RP +
Sbjct: 216 HFGFIEFRSPEEATQGFILKDVIFKGHQLKIGRPKSF 252
>UniRef50_Q7RQR4 Cluster: KED; n=3; Plasmodium (Vinckeia)|Rep: KED -
Plasmodium yoelii yoelii
Length = 858
Score = 38.7 bits (86), Expect = 0.16
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +2
Query: 515 DKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDY 631
D +AF+EFRS+ +T+ M +GI F +L+I RP +
Sbjct: 461 DTRYAFVEFRSLQDTSNCMLLNGIYFYTNNLRIGRPKTF 499
Score = 33.5 bits (73), Expect = 6.1
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 333 PQAAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFN 446
P+ + + + + AR LYVGNIP + +E ++F N
Sbjct: 399 PELGLSTIDANAEKTARELYVGNIPQNIDIQEIVKFLN 436
>UniRef50_Q00YN9 Cluster: RNA recognition motif; n=2;
Ostreococcus|Rep: RNA recognition motif - Ostreococcus
tauri
Length = 412
Score = 37.5 bits (83), Expect = 0.37
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +2
Query: 518 KNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPMPGTENPA 661
KNFAF+EF S E A+A +G+N G+++++ + MP P+
Sbjct: 321 KNFAFIEFESNKEALAALALNGMNVGGRNIRVELAKTPRLMPRATVPS 368
>UniRef50_A2Q4R3 Cluster: RNA-binding region RNP-1; n=2; core
eudicotyledons|Rep: RNA-binding region RNP-1 - Medicago
truncatula (Barrel medic)
Length = 257
Score = 37.5 bits (83), Expect = 0.37
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +2
Query: 509 NLDKNFAFLEFRSIDETTQAMAFDGINFKGQS 604
N +K FAF+E R+++E + AMA DGI F+ +
Sbjct: 222 NHEKKFAFVEMRTVEEASNAMALDGIVFEAST 253
Score = 33.9 bits (74), Expect = 4.6
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +3
Query: 369 TRQARRLYVGNIPFGVTEEETMEFFNQQM-HLSGLAQAAGNPVL 497
TR ARR+YVG +P E+ FF+Q M + G + +G+ V+
Sbjct: 174 TRHARRVYVGGLPPFANEQSIASFFSQVMIAIGGNSAGSGDSVV 217
>UniRef50_Q9LNP1 Cluster: F1L3.34; n=2; Arabidopsis thaliana|Rep:
F1L3.34 - Arabidopsis thaliana (Mouse-ear cress)
Length = 392
Score = 36.7 bits (81), Expect = 0.65
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +1
Query: 712 KIFIGGLPNYLNEDQVKNYSC 774
KIF+GGLP L ED++KNY C
Sbjct: 181 KIFVGGLPPLLEEDELKNYFC 201
>UniRef50_Q9NCC0 Cluster: Enhancer binding protein-2; n=2; Entamoeba
histolytica|Rep: Enhancer binding protein-2 - Entamoeba
histolytica
Length = 196
Score = 36.3 bits (80), Expect = 0.86
Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Frame = +2
Query: 518 KNFAFLEFRSIDETTQAMAFDGINFKGQSLKI---RRPHDYQPMPGTENPAINVPAG 679
+ FAF+E+ + ++ +A+A +G+ F+G+ LK+ R P + + +P E P G
Sbjct: 8 RGFAFVEYETEEDAKKAVAANGVEFEGRKLKVEIARPPKERKEVPEGEKKTTAGPRG 64
>UniRef50_A2AEK1 Cluster: Cleavage stimulation factor, 3' pre-RNA
subunit 2; n=6; Bilateria|Rep: Cleavage stimulation
factor, 3' pre-RNA subunit 2 - Mus musculus (Mouse)
Length = 554
Score = 35.9 bits (79), Expect = 1.1
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 339 AAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQ 449
A +PV + R R ++VGNIP+ TEE+ + F++
Sbjct: 2 AGLPVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSE 38
>UniRef50_O22794 Cluster: Putative splicing factor U2AF large chain;
n=2; Arabidopsis thaliana|Rep: Putative splicing factor
U2AF large chain - Arabidopsis thaliana (Mouse-ear
cress)
Length = 475
Score = 35.9 bits (79), Expect = 1.1
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 369 TRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGN-PVLAC 503
TR+ RRLY N+P +E+ +E FN M SG G+ P ++C
Sbjct: 206 TRRMRRLYAENVPDSASEKSLIECFNGYMLSSGSNHIKGSEPCISC 251
Score = 35.1 bits (77), Expect = 2.0
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +2
Query: 539 FRSIDETTQAMAFDGINFKGQSLKIRRPHDY 631
F + + + A++ DG +F G +LKIRRP DY
Sbjct: 253 FLTPQDASAALSLDGCSFAGSNLKIRRPKDY 283
>UniRef50_A1CA44 Cluster: RNP domain protein; n=13;
Pezizomycotina|Rep: RNP domain protein - Aspergillus
clavatus
Length = 378
Score = 35.9 bits (79), Expect = 1.1
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +3
Query: 315 NIVADTPQAAVPVVGSTITR--QARRLYVGNIPFGVTEEETMEFF 443
N A P AA P + + RRLY+GN+ + TE E EFF
Sbjct: 22 NGTAPAPAAAQPTTDAAAASADEGRRLYIGNLAYATTEGELKEFF 66
>UniRef50_A7S854 Cluster: Predicted protein; n=4; Nematostella
vectensis|Rep: Predicted protein - Nematostella vectensis
Length = 1851
Score = 35.1 bits (77), Expect = 2.0
Identities = 25/100 (25%), Positives = 36/100 (36%)
Frame = +2
Query: 194 RPINVHVDVSLRFTGMYRRRVRAYHAITIQGDASGGSDSCQYCRRHTTSCRAGGGFDYNT 373
R + D +R +G R +H + + GD G C HT C A G YN
Sbjct: 1620 RRLQAKSDRGIR-SGTEHRCAPGHHRVNVSGDPFYGKCIPCNCNNHTNDCYADTGLCYN- 1677
Query: 374 SSAKVICRQHTLWRHRRRNNGVFQSTNASIGPGPGRRQPC 493
C+ +T H + F PG ++ PC
Sbjct: 1678 ------CKHNTTGEHCELCDDGFYGNTTDGTPGDCKQCPC 1711
Score = 33.9 bits (74), Expect = 4.6
Identities = 21/77 (27%), Positives = 29/77 (37%)
Frame = +2
Query: 263 YHAITIQGDASGGSDSCQYCRRHTTSCRAGGGFDYNTSSAKVICRQHTLWRHRRRNNGVF 442
+H + + GD G C HT C A G YN C+ +T H + F
Sbjct: 1538 HHRVNVSGDPFYGKCIPCNCNNHTNDCYADTGLCYN-------CKHNTAGEHCELCDDGF 1590
Query: 443 QSTNASIGPGPGRRQPC 493
A PG ++ PC
Sbjct: 1591 YGNAADGTPGDCKQCPC 1607
>UniRef50_Q9A421 Cluster: Putative uncharacterized protein; n=3;
Caulobacter|Rep: Putative uncharacterized protein -
Caulobacter crescentus (Caulobacter vibrioides)
Length = 232
Score = 34.7 bits (76), Expect = 2.6
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +2
Query: 551 DETTQAMAFD-GINFKGQSLKIRRPHDYQPMPGTENPAINVPA 676
D T + +A + G F+G+SLK RRP P PG + PA PA
Sbjct: 173 DITHEQLAMEPGAEFQGRSLKFRRPAP-TPQPGQQAPAAPTPA 214
>UniRef50_Q2U8W5 Cluster: Predicted protein; n=1; Aspergillus
oryzae|Rep: Predicted protein - Aspergillus oryzae
Length = 104
Score = 34.7 bits (76), Expect = 2.6
Identities = 19/59 (32%), Positives = 25/59 (42%)
Frame = +3
Query: 294 AAGQIPANIVADTPQAAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGL 470
AA + N A A + + RRLY+GN+ + TE E EFF GL
Sbjct: 18 AATEATTNGTAPAAPAQSTDAAAASADEGRRLYIGNLAYATTEGELKEFFKNYKVFLGL 76
>UniRef50_A0UX43 Cluster: Extracellular solute-binding protein,
family 1 precursor; n=1; Clostridium cellulolyticum
H10|Rep: Extracellular solute-binding protein, family 1
precursor - Clostridium cellulolyticum H10
Length = 567
Score = 34.3 bits (75), Expect = 3.5
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +2
Query: 362 DYNTSSAKVICRQHTLWRHRRRNNGVFQSTNASIGPGPGRRQPCFGLPDNLDKNF 526
+YN + ++ HTLW + + G F NA+ GPG G+ + + D DK+F
Sbjct: 418 NYNDQTWRLANMAHTLWYYAPKMEGTFSDGNAT-GPG-GQPKEYYDALDQYDKDF 470
>UniRef50_Q6C1Y4 Cluster: Similarities with sp|P34761 Saccharomyces
cerevisiae YNL197c; n=1; Yarrowia lipolytica|Rep:
Similarities with sp|P34761 Saccharomyces cerevisiae
YNL197c - Yarrowia lipolytica (Candida lipolytica)
Length = 625
Score = 34.3 bits (75), Expect = 3.5
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 387 LYVGNIPFGVTEEETMEFFNQQ 452
LYVGN+P TEEE M+ F++Q
Sbjct: 516 LYVGNLPMNTTEEELMQLFSKQ 537
>UniRef50_Q3R372 Cluster: Putative uncharacterized protein; n=2;
Xylella fastidiosa|Rep: Putative uncharacterized protein
- Xylella fastidiosa Ann-1
Length = 81
Score = 33.9 bits (74), Expect = 4.6
Identities = 23/82 (28%), Positives = 32/82 (39%)
Frame = +2
Query: 236 GMYRRRVRAYHAITIQGDASGGSDSCQYCRRHTTSCRAGGGFDYNTSSAKVICRQHTLWR 415
G Y R H ++Q AS CQ +H +A + A +CRQ R
Sbjct: 5 GRYLDRTWQAHQQSVQAQASMAQQLCQALSKHGLCKQAEESY-----LAPSVCRQFRAQR 59
Query: 416 HRRRNNGVFQSTNASIGPGPGR 481
R+++ VF G GP R
Sbjct: 60 GLRKHDAVFHEPTCRKGQGPDR 81
>UniRef50_Q0UE30 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 570
Score = 33.9 bits (74), Expect = 4.6
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +2
Query: 506 DNLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRR 619
D K F ++EF S+D +A+A G F+G++++ +R
Sbjct: 160 DRKPKGFGYVEFGSVDGLKKALALSGTQFQGRNVRPKR 197
>UniRef50_UPI0000499611 Cluster: enhancer binding protein 2-related;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: enhancer
binding protein 2-related - Entamoeba histolytica
HM-1:IMSS
Length = 219
Score = 33.5 bits (73), Expect = 6.1
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 518 KNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPH 625
K F F+E+ + +ET +A+A + I F G+ L I+ H
Sbjct: 41 KGFGFVEYETEEETNKALAANDIEFMGRKLHIQIAH 76
>UniRef50_A7PJ01 Cluster: Chromosome chr13 scaffold_17, whole genome
shotgun sequence; n=3; Magnoliophyta|Rep: Chromosome
chr13 scaffold_17, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 270
Score = 33.5 bits (73), Expect = 6.1
Identities = 11/22 (50%), Positives = 19/22 (86%)
Frame = +3
Query: 384 RLYVGNIPFGVTEEETMEFFNQ 449
R+YVGN+P+ +TE+E +FF++
Sbjct: 133 RIYVGNLPWDITEDEVRKFFSR 154
>UniRef50_UPI0000515DAB Cluster: PREDICTED: similar to
Polyadenylate-binding protein 2 (Poly(A)-binding protein
2) (PolyA binding protein II) (PABII)
(Polyadenylate-binding nuclear protein 1) (Nuclear
poly(A)-binding protein 1); n=2; Coelomata|Rep:
PREDICTED: similar to Polyadenylate-binding protein 2
(Poly(A)-binding protein 2) (PolyA binding protein II)
(PABII) (Polyadenylate-binding nuclear protein 1)
(Nuclear poly(A)-binding protein 1) - Apis mellifera
Length = 228
Score = 33.1 bits (72), Expect = 8.0
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 506 DNLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQP 637
D K FA++EF D AMA D F+G+ +K+ +P
Sbjct: 137 DGHPKGFAYIEFAERDSVQTAMAMDESMFRGRQIKVMPKRTNRP 180
>UniRef50_A5GEF6 Cluster: RNP-1 like RNA-binding protein; n=1;
Geobacter uraniumreducens Rf4|Rep: RNP-1 like
RNA-binding protein - Geobacter uraniumreducens Rf4
Length = 85
Score = 33.1 bits (72), Expect = 8.0
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 381 RRLYVGNIPFGVTEEETMEFFN 446
R+L+VGN+PF TE+ EFF+
Sbjct: 3 RKLFVGNVPFTATEDHLKEFFS 24
>UniRef50_Q00WA2 Cluster: DNA-directed RNA polymerase; n=2;
Ostreococcus|Rep: DNA-directed RNA polymerase -
Ostreococcus tauri
Length = 1789
Score = 33.1 bits (72), Expect = 8.0
Identities = 26/79 (32%), Positives = 37/79 (46%)
Frame = +2
Query: 224 LRFTGMYRRRVRAYHAITIQGDASGGSDSCQYCRRHTTSCRAGGGFDYNTSSAKVICRQH 403
+R + RRR R+ A + DA S + R + GGG D +TSSA R+
Sbjct: 1 MRKSNHRRRRSRSRSASRV--DARVDSIARSLDRTVRRAANGGGGDDAHTSSAMSTSREP 58
Query: 404 TLWRHRRRNNGVFQSTNAS 460
+ RHR + G+ Q AS
Sbjct: 59 RVARHRVQQRGLVQREIAS 77
>UniRef50_Q5CFP8 Cluster: Poly(A) binding protein II; n=2;
Cryptosporidium|Rep: Poly(A) binding protein II -
Cryptosporidium hominis
Length = 263
Score = 33.1 bits (72), Expect = 8.0
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 512 LDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKI 613
+ K FA+LEF + A+ FDG F+G+ +K+
Sbjct: 150 MPKGFAYLEFCEPEAVETALKFDGAMFRGRQIKV 183
>UniRef50_Q00880 Cluster: Cutinase negative acting protein; n=2;
Sordariomycetes|Rep: Cutinase negative acting protein -
Nectria haematococca
Length = 507
Score = 33.1 bits (72), Expect = 8.0
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Frame = +3
Query: 237 GCTAA-----GFE---HITPLQYKAMQAAGQIPANIVADTPQAAVPVVGSTITRQARRLY 392
GCT A GFE L Y + A PA AD + G T++ ++ L+
Sbjct: 304 GCTKAYEAMQGFELDGRALNLDYANARPADANPAGRAADRAKRH----GDTLSPESDTLF 359
Query: 393 VGNIPFGVTEEETMEFFNQ 449
VGN+P V ++ EFF +
Sbjct: 360 VGNLPIDVDQDAVREFFGE 378
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 762,298,884
Number of Sequences: 1657284
Number of extensions: 16175024
Number of successful extensions: 43164
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 40898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43146
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65850543200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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