Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0052
(779 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0490 - 24293218-24293373,24293454-24293521,24293845-242939... 62 4e-10
11_06_0728 + 26717018-26717306,26717494-26717598,26717789-267178... 60 1e-09
03_01_0270 - 2085461-2086205,2086260-2086339,2086598-2086690,208... 58 1e-08
06_01_1037 - 8140602-8140782,8141489-8141545,8141649-8141845,814... 38 0.007
04_04_1188 + 31579833-31579914,31580001-31580176,31580822-315809... 31 1.0
10_08_0338 + 16916429-16916650,16916728-16917900 30 1.8
05_03_0023 + 7457836-7457976,7458313-7458480 30 1.8
05_01_0112 - 757514-758444,758525-758571,759074-759236,759861-76... 30 1.8
01_06_0833 + 32296957-32297256,32299257-32299895 30 1.8
09_02_0560 - 10679432-10680502 30 2.4
08_02_0181 + 13923658-13923661,13925518-13925681,13925879-139259... 30 2.4
08_01_0118 + 947394-947885,948709-948810,948914-949219,949557-94... 30 2.4
06_01_0815 + 6166861-6166953,6167074-6167173,6168569-6168639,616... 30 2.4
01_07_0227 + 42144437-42144446,42145059-42145428,42145528-421456... 30 2.4
09_02_0211 - 5817564-5817578,5817711-5818040,5818095-5818196,581... 29 3.1
09_04_0736 - 19815427-19815642,19815782-19816903,19817006-198177... 29 4.1
08_02_1101 - 24308433-24308978,24309195-24309364,24309443-243095... 29 4.1
06_01_0747 - 5587261-5587356,5587472-5587855,5588133-5588192,558... 29 4.1
03_05_0906 + 28671977-28672111,28672197-28672253,28672678-286728... 29 4.1
02_02_0100 - 6783821-6784339,6784815-6784984,6785062-6785164,678... 29 4.1
12_02_0886 + 24014478-24014565,24014929-24015413 28 7.2
10_08_0747 - 20272157-20272456,20272538-20272664,20272770-202728... 28 7.2
10_01_0298 - 3094197-3094307,3095093-3095253,3095462-3095666,309... 28 7.2
08_02_0651 - 19714348-19714395,19715319-19715429,19715503-197155... 28 7.2
06_03_0908 - 25858909-25859185,25859765-25859892,25860061-258607... 28 7.2
04_04_0435 - 25170348-25170593,25170989-25171189,25171580-251717... 28 7.2
02_05_0055 + 25453699-25453830,25454157-25454269,25454686-254549... 28 7.2
10_08_0154 + 15266430-15266953,15267748-15267820,15267893-152679... 28 9.6
08_01_0620 - 5416197-5416225,5416333-5416652,5417144-5417235,541... 28 9.6
07_03_0507 - 18871260-18871361,18871444-18871560,18871792-188721... 28 9.6
06_03_0500 + 21470681-21470952,21471049-21471089,21472322-214724... 28 9.6
04_04_1627 - 34867557-34870095,34870159-34870391,34871274-34871276 28 9.6
03_04_0162 + 17858802-17861168 28 9.6
03_01_0373 - 2904914-2904949,2905030-2905144,2906446-2906534,290... 28 9.6
>11_06_0490 -
24293218-24293373,24293454-24293521,24293845-24293986,
24294079-24294699,24294791-24294871,24295002-24295072,
24296106-24296176,24296568-24296675,24296786-24297024,
24297493-24297657
Length = 573
Score = 62.5 bits (145), Expect = 4e-10
Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Frame = +2
Query: 440 FQSTNASIG---PGPGRRQPCFGLPDNLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLK 610
F A++G GPG + N DK FAF+E RS++E + AMA DGI F+G +K
Sbjct: 251 FNQVMAAVGGNTAGPG--DAVLNVYINHDKKFAFVEMRSVEEASNAMALDGIMFEGAPVK 308
Query: 611 IRRPHDYQPM------PGTENPAINVPA 676
+RRP DY P P NP +N+ A
Sbjct: 309 VRRPTDYNPSLAAALGPSQPNPNLNLAA 336
Score = 33.9 bits (74), Expect = 0.15
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = +3
Query: 297 AGQIPA--NIVADTPQAAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQQM-HLSG 467
+G +P N+ PQA TR ARR+YVG +P E +FNQ M + G
Sbjct: 205 SGMLPNMFNLTQTPPQAMT----QQATRHARRVYVGGLPPTANEHTVAVYFNQVMAAVGG 260
Query: 468 LAQAAGNPVL 497
G+ VL
Sbjct: 261 NTAGPGDAVL 270
Score = 30.3 bits (65), Expect = 1.8
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 700 DSPHKIFIGGLPNYLNEDQVK 762
+ P +IF+GGLP Y E QV+
Sbjct: 348 EGPDRIFVGGLPYYFTEAQVR 368
>11_06_0728 +
26717018-26717306,26717494-26717598,26717789-26717870,
26717979-26718055,26719087-26719151,26719261-26719302,
26719385-26719444,26719583-26720203,26720315-26720450,
26720667-26720734,26720811-26720948
Length = 560
Score = 60.5 bits (140), Expect = 1e-09
Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Frame = +2
Query: 440 FQSTNASIG---PGPGRRQPCFGLPDNLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLK 610
F A+IG GPG + N DK FAF+E RS++E + AMA DGI F+G +K
Sbjct: 246 FNQVMAAIGGNTAGPG--DAVLNVYINHDKKFAFVEMRSVEEASNAMALDGILFEGAPVK 303
Query: 611 IRRPHDYQPM------PGTENPAINVPA 676
+RRP DY P P +P +N+ A
Sbjct: 304 VRRPTDYNPSLAAALGPSQPSPNLNLAA 331
Score = 34.7 bits (76), Expect = 0.083
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 6/83 (7%)
Frame = +3
Query: 267 TPLQYKAMQAAGQ----IPANIVADTPQAAVP-VVGSTITRQARRLYVGNIPFGVTEEET 431
TP Q+ G +P + P P + TR ARR+YVG +P E+
Sbjct: 183 TPSQFPGTAIPGMFPNMLPMGVGQFNPLVIQPQAMTQQATRHARRVYVGGLPPTANEQSV 242
Query: 432 MEFFNQQM-HLSGLAQAAGNPVL 497
+FNQ M + G G+ VL
Sbjct: 243 AIYFNQVMAAIGGNTAGPGDAVL 265
Score = 30.3 bits (65), Expect = 1.8
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 700 DSPHKIFIGGLPNYLNEDQVK 762
+ P +IF+GGLP Y E QV+
Sbjct: 343 EGPDRIFVGGLPYYFTEAQVR 363
>03_01_0270 -
2085461-2086205,2086260-2086339,2086598-2086690,
2086774-2086881,2087012-2087101,2087234-2087275,
2087516-2087587,2090848-2090985,2091074-2092624
Length = 972
Score = 57.6 bits (133), Expect = 1e-08
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +2
Query: 482 RQPCFGLPDNLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPMPGTENPA 661
+QPC N DK AF+EF + ++ T A++FDG +F G SLKIRRP +Y M
Sbjct: 510 KQPCLSCVINKDKRQAFVEFLTPEDATAALSFDGRSFGGSSLKIRRPKEYVEMAHVAPKK 569
Query: 662 INVPAGVISTVVL-IPH 709
+ +IS VV PH
Sbjct: 570 PSEEIKLISDVVADSPH 586
>06_01_1037 -
8140602-8140782,8141489-8141545,8141649-8141845,
8143174-8143242,8143347-8143490,8144055-8144225
Length = 272
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/49 (30%), Positives = 29/49 (59%)
Frame = +3
Query: 327 DTPQAAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLA 473
D + ++ G ++T + +LY+ N+ +GVT+E+ E F++ HL A
Sbjct: 70 DLFEDSMVAAGLSVTESSTKLYISNLHYGVTKEDIQELFSEMGHLKHCA 118
>04_04_1188 +
31579833-31579914,31580001-31580176,31580822-31580923,
31581015-31581245,31581821-31581922,31582092-31582184,
31582275-31582379,31582455-31582514,31582621-31582698,
31582778-31582924,31583011-31583109,31583178-31583267,
31583360-31583451,31583529-31583646,31583783-31583871,
31583998-31584088,31584203-31584294,31584442-31584749,
31584866-31584897
Length = 728
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +3
Query: 291 QAAGQIPANIVADTPQAAVPVVGSTITRQA---RRLYVGNIPFGVTEEETMEFFNQ 449
+ A + +N A P P ++ QA + L+VGN+P+ V +E+ +FF +
Sbjct: 437 ETAVSVGSNKSATKPGQEEPKTPASNQNQATGSKTLFVGNLPYNVEQEQVKQFFQE 492
>10_08_0338 + 16916429-16916650,16916728-16917900
Length = 464
Score = 30.3 bits (65), Expect = 1.8
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +1
Query: 712 KIFIGGLPNYLNEDQVKNY 768
KIF+GGLP+ L ED+ + Y
Sbjct: 129 KIFVGGLPSNLTEDEFRQY 147
>05_03_0023 + 7457836-7457976,7458313-7458480
Length = 102
Score = 30.3 bits (65), Expect = 1.8
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +3
Query: 384 RLYVGNIPFGVTEEETMEFF 443
R+YVGN+P+ V E+ M++F
Sbjct: 19 RVYVGNLPYSVDEQTLMDYF 38
>05_01_0112 -
757514-758444,758525-758571,759074-759236,759861-760366
Length = 548
Score = 30.3 bits (65), Expect = 1.8
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +3
Query: 348 PVVGSTITRQARRLYVGNIPFGVTEEETMEFF 443
PV+ + A+++YVG IP+ +E++ FF
Sbjct: 163 PVLSEESEKNAKKVYVGGIPYYSSEDDIRSFF 194
Score = 27.9 bits (59), Expect = 9.6
Identities = 7/19 (36%), Positives = 16/19 (84%)
Frame = +1
Query: 712 KIFIGGLPNYLNEDQVKNY 768
K+++GG+P Y +ED ++++
Sbjct: 175 KVYVGGIPYYSSEDDIRSF 193
Score = 27.9 bits (59), Expect = 9.6
Identities = 9/21 (42%), Positives = 17/21 (80%)
Frame = +3
Query: 384 RLYVGNIPFGVTEEETMEFFN 446
R+YVGN+ + +TE++ +FF+
Sbjct: 268 RVYVGNLAWDITEDDLKKFFS 288
>01_06_0833 + 32296957-32297256,32299257-32299895
Length = 312
Score = 30.3 bits (65), Expect = 1.8
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +3
Query: 375 QARRLYVGNIPFGVTEEETMEFFNQ 449
Q R+++VG +P TE++ E+FN+
Sbjct: 122 QKRKIFVGGLPVSATEKKLKEYFNK 146
>09_02_0560 - 10679432-10680502
Length = 356
Score = 29.9 bits (64), Expect = 2.4
Identities = 28/97 (28%), Positives = 39/97 (40%), Gaps = 1/97 (1%)
Frame = +2
Query: 227 RFTGMYRRRVRAYHAITIQGDASGGSDSCQYCRRHTTSCRAGGGFDYNTSSAKVICRQHT 406
R G Y R Y I D +G Y GGG D + S+ +VIC +
Sbjct: 85 RVAGYYHTLTRRYQGILCPADFTG------YRCIGVFLLGGGGGGDISLSNFRVICALYD 138
Query: 407 LWRHRRRNNGVFQSTNASIGP-GPGRRQPCFGLPDNL 514
L+ R+ GV + S G G G R P + D++
Sbjct: 139 LYWLNNRHIGVQLACVFSSGSHGGGWRLPKSAVADDI 175
>08_02_0181 +
13923658-13923661,13925518-13925681,13925879-13925978,
13926072-13926244,13926486-13927016
Length = 323
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +1
Query: 712 KIFIGGLPNYLNEDQVKNY 768
KIF+GGLP+ L ED+ K +
Sbjct: 77 KIFVGGLPSALKEDEFKEF 95
>08_01_0118 +
947394-947885,948709-948810,948914-949219,949557-949616
Length = 319
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 348 PVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQ 449
P V I ++YVGNI + V +E E+F+Q
Sbjct: 226 PPVKDHIFESPHKIYVGNIAWSVEPQELREYFSQ 259
>06_01_0815 +
6166861-6166953,6167074-6167173,6168569-6168639,
6169873-6170064,6170168-6170290
Length = 192
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = +3
Query: 321 VADTPQAAVPVVGSTITRQ---ARRLYVGNIPFGVTEEETMEFFN 446
VA Q P S+ +++ AR +YVGN+ + T EE + FN
Sbjct: 59 VAKEMQGLDPNASSSESKEEMDARSVYVGNVDYACTPEEVQQHFN 103
>01_07_0227 +
42144437-42144446,42145059-42145428,42145528-42145649,
42145767-42145935,42146236-42146545,42146742-42146825,
42147012-42147083,42147780-42147821,42147931-42148020,
42148106-42148213,42148292-42148384,42148540-42148619,
42148701-42148953,42151222-42151236
Length = 605
Score = 29.9 bits (64), Expect = 2.4
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 700 DSPHKIFIGGLPNYLNEDQVKN 765
DSPHKIFI G+P ++ +++
Sbjct: 375 DSPHKIFIAGIPRVISSKMLRD 396
>09_02_0211 -
5817564-5817578,5817711-5818040,5818095-5818196,
5818616-5818915
Length = 248
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +3
Query: 378 ARRLYVGNIPFGVTEEETMEFF 443
AR+LYVGNIP VT +E F
Sbjct: 69 ARKLYVGNIPRTVTNDELAAMF 90
>09_04_0736 -
19815427-19815642,19815782-19816903,19817006-19817707,
19817808-19817855,19817959-19818201,19819035-19819391
Length = 895
Score = 29.1 bits (62), Expect = 4.1
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +3
Query: 270 PLQYKAMQAAGQIPANIVADTPQAAVPV--VGSTITRQARRLYVGNIPFGVTEEETMEFF 443
P Q + +AAG+ ++ ++ ++A VG + + L+VGN+P E++ M F
Sbjct: 7 PPQPQPQEAAGREASSSLSPAKESAAGGGGVGGSGAPETNTLWVGNLPAQAAEDDVMASF 66
Query: 444 NQQMHLSGLAQAAG 485
+ L + AG
Sbjct: 67 SPHGALDCVMARAG 80
>08_02_1101 -
24308433-24308978,24309195-24309364,24309443-24309542,
24310337-24310500,24310960-24310996,24311222-24311262,
24313877-24314093
Length = 424
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1
Query: 712 KIFIGGLPNYLNEDQVKNY 768
KIF+GGLP L ED K++
Sbjct: 174 KIFVGGLPQALTEDDFKHF 192
>06_01_0747 - 5587261-5587356,5587472-5587855,5588133-5588192,
5588428-5588484,5588663-5588800,5588901-5588966,
5589234-5589452,5589522-5589737,5589813-5589884,
5589952-5590205,5590356-5590525,5590840-5591029,
5592211-5592331,5592838-5592921,5593003-5593365,
5594530-5594724,5594938-5595933,5596329-5596370
Length = 1240
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = +2
Query: 185 DQDRPINVHVDVSLRFTGMYRRRV--RAYHAITIQGDASGGSDSCQYCRRHTTSC 343
D +P + D+ +G +R+ + R HA + D+C C R+ SC
Sbjct: 940 DGSKPCLLQCDLCHGTSGAFRKTIKGRCIHAFCAEESLPKDKDTCAICHRNVGSC 994
>03_05_0906 +
28671977-28672111,28672197-28672253,28672678-28672854,
28672935-28673021,28675339-28675403,28676914-28677010,
28677162-28677248
Length = 234
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 244 PPPGSSISRHYNTRRCKRRVRFLPILSPTHHKLP 345
PPP S IS+H + VRF SP H +P
Sbjct: 195 PPPPSLISKHLAKNQRSDDVRFESSWSPAHSDIP 228
>02_02_0100 -
6783821-6784339,6784815-6784984,6785062-6785164,
6785291-6785454,6786781-6786821,6786933-6787129
Length = 397
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = +1
Query: 712 KIFIGGLPNYLNEDQVKNY 768
KIF+GGLP+ L ED+++ +
Sbjct: 156 KIFVGGLPSSLTEDELREH 174
>12_02_0886 + 24014478-24014565,24014929-24015413
Length = 190
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 221 SLRFTGMYRRRVRAYHAITIQGDASGGSDSCQYCRRHTTSCRAGGG 358
++R + RRR R+ ++ D SG SC+YC + T S + GG
Sbjct: 124 TIRTSRSRRRRRRSVVWEHMEVDPSGNEASCRYCTK-TLSANSRGG 168
>10_08_0747 -
20272157-20272456,20272538-20272664,20272770-20272843,
20272928-20272971,20273697-20276223
Length = 1023
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 372 RQARRLYVGNIPFGVTEEETMEFFN 446
R RLYVGN+ F V+E + ++ F+
Sbjct: 866 RSESRLYVGNLDFRVSESDIIKMFS 890
>10_01_0298 -
3094197-3094307,3095093-3095253,3095462-3095666,
3096349-3096534,3096616-3096756,3096843-3096959,
3097046-3097456
Length = 443
Score = 28.3 bits (60), Expect = 7.2
Identities = 8/23 (34%), Positives = 18/23 (78%)
Frame = +1
Query: 697 TDSPHKIFIGGLPNYLNEDQVKN 765
+ + H++F+G +P L+ED+++N
Sbjct: 185 SQAKHRLFVGNVPKGLSEDELRN 207
>08_02_0651 -
19714348-19714395,19715319-19715429,19715503-19715572,
19716081-19716178,19716272-19716319,19716391-19716446,
19718191-19718314,19718417-19718506
Length = 214
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 387 LYVGNIPFGVTEEETMEFFNQ 449
LY+G+IP G EE+ FF Q
Sbjct: 56 LYIGHIPHGFYEEQMQGFFQQ 76
>06_03_0908 -
25858909-25859185,25859765-25859892,25860061-25860765,
25860882-25860944,25861031-25861084,25861338-25861514,
25861644-25861813,25862011-25862065,25862220-25862918,
25863110-25863173,25863515-25863723,25866138-25866227,
25866390-25866617
Length = 972
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -2
Query: 292 CIALYCNGVICSNPAAVHPSKAKAYVYVNVYW 197
C ALY +G + +H S++KA Y++V W
Sbjct: 856 CHALYNHGATRLSVIPIHASRSKALRYLSVRW 887
>04_04_0435 -
25170348-25170593,25170989-25171189,25171580-25171756,
25172284-25172418,25173131-25173262,25173292-25173369,
25173452-25174108,25174210-25174328,25175897-25176173
Length = 673
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +3
Query: 276 QYKAMQAAGQIPANIVADTPQAAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQ 449
Q A+ G P + A V V A+ LYVG++ VT+ + E F+Q
Sbjct: 4 QMAAVAVNGGSPGAVTAAAAAGGVGVAVGLGGGGAQSLYVGDLEASVTDSQLYELFSQ 61
>02_05_0055 +
25453699-25453830,25454157-25454269,25454686-25454942,
25455480-25456297
Length = 439
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = +3
Query: 330 TPQAAVPVVGSTITRQARRLYVGNIPFGVTEEE-TMEFFNQQMHLSGLA--QAAGNPVLA 500
TP + +T + R+Y+ NI FG EE TM+ F SG + Q +PVL
Sbjct: 336 TPNVMICPYDFPLTEKDMRVYIPNITFGGEEEPVTMKRFGSFWFKSGRSGNQEGESPVLK 395
Query: 501 CQII 512
++
Sbjct: 396 TLVL 399
>10_08_0154 +
15266430-15266953,15267748-15267820,15267893-15267949,
15268248-15268303,15269584-15269797,15270497-15270538,
15270661-15270735,15270820-15270903,15271880-15271944,
15272436-15272655,15272820-15272908,15273326-15273440,
15273519-15273554
Length = 549
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 357 GSTITRQARRLYVGNIPFGVTEEETMEFF 443
G + AR+LYVGN+ +TE++ + F
Sbjct: 282 GGIASGGARKLYVGNLHSNITEDQLRQVF 310
>08_01_0620 -
5416197-5416225,5416333-5416652,5417144-5417235,
5417304-5417394,5417489-5417577,5417812-5417929,
5418007-5418098,5418180-5418215,5418323-5418403,
5418510-5418617,5418809-5418901,5419045-5419146,
5419345-5419449,5419526-5419612,5419952-5420227
Length = 572
Score = 27.9 bits (59), Expect = 9.6
Identities = 10/47 (21%), Positives = 23/47 (48%)
Frame = +3
Query: 309 PANIVADTPQAAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQ 449
PA + + P + ++ L++GN+ F + +++ EFF +
Sbjct: 287 PAATKSQNDEPKTPASNQSQGTESATLFMGNLSFNLNQDQVKEFFQE 333
>07_03_0507 -
18871260-18871361,18871444-18871560,18871792-18872120,
18872704-18872871,18873592-18873685,18873707-18873766,
18874702-18874762,18875258-18875319,18875729-18875856,
18876783-18876852,18877472-18877630
Length = 449
Score = 27.9 bits (59), Expect = 9.6
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +3
Query: 303 QIPANIVADTPQAAVP--VVGSTITRQARRLYVGNIP 407
QI N++ DT + P ++G TITR A LY+ P
Sbjct: 299 QIVTNVIRDTRKPLHPQYILGMTITRLAIPLYIFGCP 335
>06_03_0500 +
21470681-21470952,21471049-21471089,21472322-21472485,
21472577-21472679,21472806-21472975,21473766-21474239
Length = 407
Score = 27.9 bits (59), Expect = 9.6
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 712 KIFIGGLPNYLNEDQVKNY 768
KIF+GG+P L ED++K +
Sbjct: 181 KIFVGGIPPSLTEDKLKEH 199
>04_04_1627 - 34867557-34870095,34870159-34870391,34871274-34871276
Length = 924
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/53 (24%), Positives = 25/53 (47%)
Frame = +3
Query: 285 AMQAAGQIPANIVADTPQAAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFF 443
A+ I + +P A++ V +T RLY+ N+P +T ++ + F
Sbjct: 481 ALVGGEMIIVRVAGLSPSASISAVQTTQDINKSRLYITNLPRSMTADKMVNLF 533
>03_04_0162 + 17858802-17861168
Length = 788
Score = 27.9 bits (59), Expect = 9.6
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = -2
Query: 349 GTAACGVSATILAGI*PAACIALY--CNGVICSNPAAV 242
G + G+ A AGI P A +A+Y CNG C + A +
Sbjct: 246 GASDRGLGAGTAAGIAPGAHVAMYKVCNGSGCDDDAVL 283
>03_01_0373 -
2904914-2904949,2905030-2905144,2906446-2906534,
2906670-2906889,2907921-2907985,2908619-2908879,
2909204-2909417,2910643-2910698,2910891-2910947,
2911043-2911115,2912711-2913225
Length = 566
Score = 27.9 bits (59), Expect = 9.6
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +3
Query: 378 ARRLYVGNIPFGVTEEETMEF 440
AR+LYVGN+ +TE++ +F
Sbjct: 286 ARKLYVGNLHSNITEDQLRQF 306
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,356,925
Number of Sequences: 37544
Number of extensions: 486062
Number of successful extensions: 1392
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1392
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2091906552
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -