Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0051
(758 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0971 - 21949721-21949936,21950051-21950484,21950599-219507... 53 3e-07
10_08_0973 - 21963754-21963936,21964089-21964383,21964504-219646... 48 8e-06
02_05_1039 + 33707196-33708815 47 2e-05
03_06_0372 + 33446153-33446665,33446744-33446993,33447347-334475... 40 0.002
03_01_0329 + 2558726-2559112,2559214-2559449,2559537-2559663,256... 38 0.009
03_06_0373 + 33468711-33468917,33469020-33469217 35 0.081
03_06_0371 + 33435936-33436472,33436554-33436741,33437146-334372... 35 0.081
03_06_0370 + 33431696-33432217,33432521-33432796,33433003-334331... 35 0.081
03_06_0369 + 33425251-33425778,33425864-33426051,33426152-334262... 32 0.43
04_04_1572 - 34527730-34527859,34528077-34528136,34528253-345283... 32 0.57
10_08_0736 + 20205934-20206551,20207258-20207426,20207562-202076... 29 3.0
03_05_0534 + 25343973-25344267,25344510-25344979 29 3.0
10_01_0311 + 3441911-3443035 29 5.3
09_04_0222 + 15825878-15826451,15826542-15827017 29 5.3
05_03_0677 - 16863260-16863778 29 5.3
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 29 5.3
10_08_1058 + 22608852-22609172,22609257-22610651 28 7.0
08_02_0063 - 11842013-11842327,11842333-11842608,11842622-11842642 28 7.0
06_03_0013 - 15393830-15394060,15394238-15394672 28 7.0
02_02_0431 - 10152228-10152352,10152688-10152919,10153602-101538... 28 7.0
12_02_0305 - 17235832-17236379,17237345-17237444 28 9.3
11_02_0111 + 8396304-8396378,8396697-8397113,8397220-8397483,839... 28 9.3
10_01_0144 - 1705429-1706250 28 9.3
08_02_0168 - 13640894-13641973 28 9.3
07_03_1226 - 24998276-24998375,24998728-24998849,24998936-249997... 28 9.3
05_01_0289 + 2265440-2266229,2267148-2267236 28 9.3
04_04_0860 + 28827442-28827801 28 9.3
>10_08_0971 -
21949721-21949936,21950051-21950484,21950599-21950791,
21950909-21951007,21951114-21951191,21951275-21951669,
21954317-21954482,21954840-21954927,21955015-21955127,
21955242-21955426,21955840-21955987,21956071-21956349,
21956425-21956529,21956892-21957137,21957367-21957408,
21957539-21957613
Length = 953
Score = 52.8 bits (121), Expect = 3e-07
Identities = 26/78 (33%), Positives = 36/78 (46%)
Frame = +1
Query: 508 LLSIDALGQNLCVYRGEDGLARCVDAYCPHLGANLAVGGTVRGSCIECPFHKWRFNAAGT 687
++ ID + ++RG+DG CV C H L +G G I+CPFH W ++ G
Sbjct: 249 MVPIDCFEEQWVIFRGKDGRPGCVQNTCAHRACPLHLGSVSEGR-IQCPFHGWEYSTDGK 307
Query: 688 ASVCPALILHQKAYRSGP 741
PA L RS P
Sbjct: 308 CEKMPATKLLNVRIRSLP 325
>10_08_0973 -
21963754-21963936,21964089-21964383,21964504-21964616,
21964729-21964913,21965054-21965201,21965297-21965575,
21965657-21965761,21965936-21966178,21966426-21966486,
21966734-21966792
Length = 556
Score = 48.0 bits (109), Expect = 8e-06
Identities = 23/78 (29%), Positives = 36/78 (46%)
Frame = +1
Query: 508 LLSIDALGQNLCVYRGEDGLARCVDAYCPHLGANLAVGGTVRGSCIECPFHKWRFNAAGT 687
++ ID + ++RG+DG CV C H L +G G I+CP+H W ++ G
Sbjct: 249 MVPIDCFEEQWVIFRGKDGRPGCVMNTCAHRACPLHLGSVNEGR-IQCPYHGWEYSTDGK 307
Query: 688 ASVCPALILHQKAYRSGP 741
P+ + RS P
Sbjct: 308 CEKMPSTKMLNVRIRSLP 325
>02_05_1039 + 33707196-33708815
Length = 539
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/66 (34%), Positives = 33/66 (50%)
Frame = +1
Query: 511 LSIDALGQNLCVYRGEDGLARCVDAYCPHLGANLAVGGTVRGSCIECPFHKWRFNAAGTA 690
L + + L +YR G+ RC + CPH A L+ G V G +EC +H W+F+ G
Sbjct: 104 LPLTVFDRQLVLYRDAAGVLRCHEDRCPHRLAKLSEGQLVDGK-LECLYHGWQFDGEGKC 162
Query: 691 SVCPAL 708
P L
Sbjct: 163 VKIPQL 168
>03_06_0372 +
33446153-33446665,33446744-33446993,33447347-33447501,
33447593-33447805,33447926-33448113,33448282-33448540
Length = 525
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +1
Query: 547 YRGEDGLARCVDAYCPHLGANLAVGGTVRGSCIECPFHKWRFNAAGTASVCP 702
+ G G R VD CPH A L+ G C++C +H W F+ G+ P
Sbjct: 112 FDGGGGEWRVVDDACPHRLAPLSEGRVDGKGCLQCAYHGWCFDGHGSCQFIP 163
>03_01_0329 +
2558726-2559112,2559214-2559449,2559537-2559663,
2560190-2560326,2560467-2560626,2560828-2561106,
2561750-2561920,2562636-2562717,2563397-2563623,
2563682-2563727,2564199-2564281,2564376-2564492,
2564965-2565036
Length = 707
Score = 37.9 bits (84), Expect = 0.009
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +1
Query: 526 LGQNLCVYRG-EDGLARCVDAYCPHLGANLAVGGTVRGSCIECPFHKWRFNAAGTASVCP 702
L ++L +++ + G +D CPH A L+ G C++C +H W F+ +G + P
Sbjct: 99 LNRDLVIWKDPKSGEWVALDDRCPHRLAPLSEGRIDETGCLQCSYHGWSFDGSGACTRIP 158
>03_06_0373 + 33468711-33468917,33469020-33469217
Length = 134
Score = 34.7 bits (76), Expect = 0.081
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +1
Query: 526 LGQNLCVYRGEDGLARCVDAYCPHLGANLAVGGTVRGSCIECPFHKWRFNAAGTASVCP 702
+G ++ + G R VD CPH A L+ G ++C +H W F+ G+ P
Sbjct: 3 MGLSVVAWLDGGGEWRVVDDACPHRLAPLSEGRVDGKGRLQCAYHGWCFDGHGSCQFIP 61
>03_06_0371 +
33435936-33436472,33436554-33436741,33437146-33437245,
33437360-33437545,33438977-33439186,33439772-33439959,
33440083-33440341
Length = 555
Score = 34.7 bits (76), Expect = 0.081
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +1
Query: 553 GEDGLARCVDAYCPHLGANLAVGGTVRGSCIECPFHKWRFNAAGTASVCP 702
G G R VD CPH A L+ G ++C +H W F+ G+ P
Sbjct: 122 GGGGEWRVVDDACPHRLAPLSEGRVDGKGRLQCAYHGWCFDGHGSCQFIP 171
>03_06_0370 +
33431696-33432217,33432521-33432796,33433003-33433183,
33433253-33433455,33433545-33433732,33433844-33434105
Length = 543
Score = 34.7 bits (76), Expect = 0.081
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +1
Query: 526 LGQNLCVYRGEDGLARCVDAYCPHLGANLAVGGTVRGSCIECPFHKWRFNAAGTASVCP 702
LG + + G R VD CPH A L+ G ++C +H W F+ G+ P
Sbjct: 108 LGLRVVAWFDGGGEWRVVDDACPHRLAPLSEGRVDGKGRLQCAYHGWCFDGHGSCQFIP 166
>03_06_0369 +
33425251-33425778,33425864-33426051,33426152-33426251,
33426366-33426578,33426616-33426822,33426908-33427095,
33427234-33427492
Length = 560
Score = 32.3 bits (70), Expect = 0.43
Identities = 16/50 (32%), Positives = 21/50 (42%)
Frame = +1
Query: 553 GEDGLARCVDAYCPHLGANLAVGGTVRGSCIECPFHKWRFNAAGTASVCP 702
G G R D CPH A L+ G ++C +H W F+ G P
Sbjct: 119 GGGGEWRVFDDSCPHRLAPLSEGRVDDKGRLQCVYHGWCFDGRGACQFIP 168
>04_04_1572 -
34527730-34527859,34528077-34528136,34528253-34528375,
34528506-34528960,34529343-34529876,34530638-34531501
Length = 721
Score = 31.9 bits (69), Expect = 0.57
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +2
Query: 257 YILILTLMFAFSAILYVIYKS-YISPVFYKKELTEVGFDHIPQG 385
Y+L+L + +S LYV Y S Y+ + ++ VGF H+ G
Sbjct: 232 YVLVLLVTGRYSQRLYVAYNSTYVLGMLLAMQIRFVGFQHVQSG 275
>10_08_0736 +
20205934-20206551,20207258-20207426,20207562-20207692,
20208100-20208144,20208145-20208939,20209081-20209128,
20209504-20209620,20210087-20210161
Length = 665
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -3
Query: 687 SAGRVETPLMEGAFDTAATHRAADRKIRAQMRTVCVHAPGQAVLATVHAQI 535
S+GRVE A RAA R++R +C+ +P +A A V A++
Sbjct: 59 SSGRVEAAAAVLLTSLAFLPRAAQRRLRPWQLILCLGSPDRAADAAVAAEL 109
>03_05_0534 + 25343973-25344267,25344510-25344979
Length = 254
Score = 29.5 bits (63), Expect = 3.0
Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = -1
Query: 686 VPAALKRHLWKGH--SIQLPRTVPPTARFAPKCGQYASTHRARPS 558
VPA L HL G + L R V P FAP A+ RA+PS
Sbjct: 191 VPAGLADHLDAGEVSEVALERVVIPRLAFAPVKETVATKSRAQPS 235
>10_01_0311 + 3441911-3443035
Length = 374
Score = 28.7 bits (61), Expect = 5.3
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +3
Query: 396 GGGSVAPKP--PDGWAANCPLPTPMGG--SRSPKQGSLKLAAPLY 518
G G+VAP P G AA PLP MGG + +P G+L P +
Sbjct: 255 GAGAVAPLPGAAGGDAAAAPLPGDMGGDAALAPLPGALGGVDPAF 299
>09_04_0222 + 15825878-15826451,15826542-15827017
Length = 349
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = -3
Query: 507 LPTLSSLVSATANHPLXXXXGNLLPIRLEAWARLIRLPLSGP 382
LP + A A PL LP+ + W RLPLS P
Sbjct: 20 LPVSGAARGAAARLPLPEPPCTRLPLPEQPWGTAARLPLSEP 61
>05_03_0677 - 16863260-16863778
Length = 172
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2
Query: 395 GRRISRAQASRRMGSKLPPPYPNGWFAVAETRELKVGSSSL 517
GRRI RA + RR+ ++L Y G +A + + G S+L
Sbjct: 67 GRRILRALSPRRLLARLRDAYVRGMLRLASSAAVAGGGSAL 107
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 28.7 bits (61), Expect = 5.3
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 396 GGGSVAPKPPDGWAANCPLPTPMGG 470
G G+ P PP G P P P+GG
Sbjct: 1105 GAGAPPPPPPPGGITGVPPPPPIGG 1129
>10_08_1058 + 22608852-22609172,22609257-22610651
Length = 571
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 207 FGVAEKCLLFLLSVRCRGTPCSKRRLP 127
FG+A CLL + TPC + RLP
Sbjct: 222 FGIATLCLLIASAAFLAATPCYRVRLP 248
>08_02_0063 - 11842013-11842327,11842333-11842608,11842622-11842642
Length = 203
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = -1
Query: 689 AVPAALKRHLWKGHSIQLPRTVPPTARFAPKCGQYASTHRARPSSPRY 546
+ PAA W S++LP PP +P Q++ T P P Y
Sbjct: 9 STPAAYAAKDWVKLSLELPPRTPPGQEPSPAAYQFSRTICRIPKDPIY 56
>06_03_0013 - 15393830-15394060,15394238-15394672
Length = 221
Score = 28.3 bits (60), Expect = 7.0
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 9/58 (15%)
Frame = +2
Query: 518 SMPWVRI-CACTVA-RTAW-------PGAWTHTVRIWARILRSAARCVAAVSNAPSIS 664
S W+R C TVA R AW P W H R W +R A VA ++ S S
Sbjct: 153 SKEWIRWHCVGTVAKRRAWAAWTRRTPNVWNHDYRRWRAGMRGFALGVAVLARRMSTS 210
>02_02_0431 -
10152228-10152352,10152688-10152919,10153602-10153808,
10153915-10154034,10154114-10154260,10155080-10155147,
10155502-10155667,10156765-10156914,10157219-10157335,
10158177-10158281,10159050-10159147,10159594-10159763,
10161489-10161511,10161927-10162006,10162191-10162259,
10163198-10163442,10163614-10163810
Length = 772
Score = 28.3 bits (60), Expect = 7.0
Identities = 20/64 (31%), Positives = 26/64 (40%)
Frame = -1
Query: 647 SIQLPRTVPPTARFAPKCGQYASTHRARPSSPRYTHKF*PRASIERSCQL*APLFRRPRT 468
++ PR PP R AP+ + A RA SSP P ++ P R RT
Sbjct: 9 AVSFPRPAPPPRRCAPRRHRRALAPRAASSSPS------PSTAVAAPVYAPTPRDRALRT 62
Query: 467 THWG 456
H G
Sbjct: 63 PHSG 66
>12_02_0305 - 17235832-17236379,17237345-17237444
Length = 215
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 408 VAPKPPDGWAANCPLPTPMGGSRSPKQGSLKL 503
VAP P A P PTP GGS+ P++ + L
Sbjct: 111 VAPSQPPTIAPTQP-PTPSGGSQCPRENVIAL 141
>11_02_0111 +
8396304-8396378,8396697-8397113,8397220-8397483,
8398237-8398608
Length = 375
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 418 LGATDPPPLVRTLRYMIEADFCQFL 344
+GAT PP + + + E DF QFL
Sbjct: 180 IGATTPPSVAKLYQNQFEKDFSQFL 204
>10_01_0144 - 1705429-1706250
Length = 273
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 401 RISRAQASRRMGSKLPPPYPNGW 469
+ R Q RR G LPPP P+GW
Sbjct: 50 KAGRQQGRRRWGL-LPPPTPDGW 71
>08_02_0168 - 13640894-13641973
Length = 359
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +2
Query: 53 ELNEIVVSNSNKQNGGSSTFSIRHHGSRLFEHGVPRHRTESRNNKH 190
E+ ++ + K +GG T R+HG + G P H+ S H
Sbjct: 217 EMQQVYTFDMQKSSGGDQT---RNHGDKNSNSGGPVHKKSSSQRHH 259
>07_03_1226 -
24998276-24998375,24998728-24998849,24998936-24999702,
25000447-25000618
Length = 386
Score = 27.9 bits (59), Expect = 9.3
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +3
Query: 396 GGGSVAPKPPDGWAANC-PLPTPMGGSRSPKQGSLKLAAP 512
G GS P GWAA P P P S +P++G AP
Sbjct: 8 GAGSAVSSP--GWAAAVTPQPPPFAASPAPERGRHHEGAP 45
>05_01_0289 + 2265440-2266229,2267148-2267236
Length = 292
Score = 27.9 bits (59), Expect = 9.3
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +2
Query: 383 GPDKGRRISRAQASRRMGSKLPPPYPNGWFAVAETRELKVGSSSLSMPWVRI 538
G G + + S G ++ PP P+ W AV ET K S W+R+
Sbjct: 61 GGGGGGGVRDRRGSSGGGRRVLPP-PHAWLAVEETAARKSYGSDPEEQWMRV 111
>04_04_0860 + 28827442-28827801
Length = 119
Score = 27.9 bits (59), Expect = 9.3
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +2
Query: 518 SMPWVRICACTVARTAWPGAWTHTVRIWARILRSAARCVAAVSNAPSISGVSTRP 682
S+ +CA A A +W V + A +L A R A + P + G + RP
Sbjct: 13 SLRRAELCAAA-ASAADAASWCFAVALVALVLLCALRAEAVEVHGPRLGGAAARP 66
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,863,288
Number of Sequences: 37544
Number of extensions: 586454
Number of successful extensions: 2304
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 2123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2296
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2027850416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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