Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0051
         (758 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73969-4|CAA98235.2|  428|Caenorhabditis elegans Hypothetical pr...    72   5e-13
U41533-3|AAA83164.1|  206|Caenorhabditis elegans Glutathione s-t...    30   1.6  
Z83129-3|CAB05641.1|  300|Caenorhabditis elegans Hypothetical pr...    29   3.6  
AL032652-4|CAB63398.1|  486|Caenorhabditis elegans Hypothetical ...    29   3.6  
Z79603-6|CAB01895.1|  157|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z83129-5|CAB05643.1|  349|Caenorhabditis elegans Hypothetical pr...    28   8.3  
AF100669-3|AAK39266.1|  747|Caenorhabditis elegans Hypothetical ...    28   8.3  

>Z73969-4|CAA98235.2|  428|Caenorhabditis elegans Hypothetical
           protein C12D8.5 protein.
          Length = 428

 Score = 71.7 bits (168), Expect = 5e-13
 Identities = 30/59 (50%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
 Frame = +1

Query: 505 QLLSIDALGQNLCVYRGEDGLARCVDAYCPHLGANLAVGG-TVRGSCIECPFHKWRFNA 678
           Q++ I  LGQ L + R E G     D+YCPH+GAN  +GG  VR +CI+CPFH W F+A
Sbjct: 94  QIMEITVLGQFLSLIRSESGAVYITDSYCPHIGANFNIGGRVVRDNCIQCPFHGWIFSA 152



 Score = 39.5 bits (88), Expect = 0.003
 Identities = 24/70 (34%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
 Frame = +2

Query: 296 ILYVIYKSYISPVFYKKELTEVG-FDHIPQ--GPDKGRRISRAQASRRMGSKLPPPYPNG 466
           I+Y+I+ + + P+   + L +VG F   P+  G  + R++ R +  RR+G  +PP +PNG
Sbjct: 23  IVYLIHIT-LKPLNRVRRLGDVGLFFGKPELKGFYRERQLERLKLLRRVGD-MPPVFPNG 80

Query: 467 WFAVAETREL 496
           W+ V E+ +L
Sbjct: 81  WYCVCESEKL 90


>U41533-3|AAA83164.1|  206|Caenorhabditis elegans Glutathione
           s-transferase protein 9 protein.
          Length = 206

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = +1

Query: 415 PSLQTDGQQIAPSLP--QWVVRGRRNKGA*SWQLLSIDALGQNLCVYRGE 558
           P L+ DG+Q+A S+   +++ +     G  SW+   +DALG     YR E
Sbjct: 52  PVLEVDGRQLAQSITIVRYLSKQFGISGKSSWEEAQVDALGDQFKDYRVE 101


>Z83129-3|CAB05641.1|  300|Caenorhabditis elegans Hypothetical
           protein W06G6.6 protein.
          Length = 300

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +3

Query: 288 SPRFCMLYTSHISVLFSIKRN*QKSASIIYLKVRTRGGGSVAP 416
           S  FC+   SH  + FS+  N +K+A +++   R +   SV P
Sbjct: 255 SALFCLNSASHCLINFSMSTNYRKAAKMVFFANRKQMNTSVLP 297


>AL032652-4|CAB63398.1|  486|Caenorhabditis elegans Hypothetical
           protein Y63D3A.5 protein.
          Length = 486

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 15/31 (48%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = -2

Query: 484 FGDREPPIGVGRGQFAAHP-SGGLGATDPPP 395
           FG   PP+    G FA  P SG  GA  PPP
Sbjct: 364 FGGPPPPVSSAPGNFAPPPQSGPPGAFAPPP 394



 Score = 29.1 bits (62), Expect = 3.6
 Identities = 15/29 (51%), Positives = 15/29 (51%)
 Frame = -2

Query: 481 GDREPPIGVGRGQFAAHPSGGLGATDPPP 395
           G   PP G G G F   P GG GA  PPP
Sbjct: 421 GSYGPPQG-GPGGFGPPPPGGPGAYGPPP 448


>Z79603-6|CAB01895.1|  157|Caenorhabditis elegans Hypothetical
           protein M163.6 protein.
          Length = 157

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 673 NAAGTASVCPALILHQKAYRSGPG 744
           N +G   VCP ++    AYR GPG
Sbjct: 25  NHSGCHHVCPTVVREADAYRVGPG 48


>Z83129-5|CAB05643.1|  349|Caenorhabditis elegans Hypothetical
           protein W06G6.8 protein.
          Length = 349

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +3

Query: 288 SPRFCMLYTSHISVLFSIKRN*QKSASIIYLKVRTRGGGSV 410
           S  FC+   SH  + FS+  N +K+A +++   R +   SV
Sbjct: 298 SALFCLNSASHCLINFSMSTNYRKAAKMVFFANRKQSSTSV 338


>AF100669-3|AAK39266.1|  747|Caenorhabditis elegans Hypothetical
           protein R11E3.4 protein.
          Length = 747

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 19/39 (48%), Positives = 21/39 (53%)
 Frame = +3

Query: 99  DRQHFPSAITEAVSSNTACPDTGPKAETTNIFLLLQKNI 215
           +R HF   I  A S N AC   G K  T NI LL +KNI
Sbjct: 370 ERNHFFDTIGFACSENCAC---GGKC-TNNITLLPEKNI 404


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,374,049
Number of Sequences: 27780
Number of extensions: 451801
Number of successful extensions: 1320
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1314
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)