Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0048
         (805 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0593 + 20874459-20874575,20875258-20875427,20875597-208756...    45   6e-05
12_01_0933 - 9263023-9263146,9263224-9263416,9263495-9263634,926...    38   0.007
08_02_0984 + 23294646-23294677,23294805-23294892,23295450-23296226     30   1.9  
05_05_0377 - 24498664-24500215,24500306-24500643                       29   5.7  
02_01_0159 - 1109249-1109280,1109334-1109397,1109524-1109627,111...    28   10.0 

>12_02_0593 +
           20874459-20874575,20875258-20875427,20875597-20875672,
           20875764-20875894,20876570-20876692,20876780-20876893,
           20877163-20877239,20877405-20877472,20877740-20877861,
           20878041-20878180,20878411-20878603,20878692-20878827
          Length = 488

 Score = 45.2 bits (102), Expect = 6e-05
 Identities = 19/34 (55%), Positives = 26/34 (76%)
 Frame = +2

Query: 5   NRQVGHMLRTKLADANEGGVAAGLGALDSPYLLD 106
           N Q G+++RTK++ ++EGGVAAG   LDS YL D
Sbjct: 452 NEQSGYLMRTKVSSSDEGGVAAGFAVLDSLYLTD 485


>12_01_0933 -
           9263023-9263146,9263224-9263416,9263495-9263634,
           9263760-9263881,9263970-9264039,9264463-9264498,
           9264567-9264692,9265294-9265424,9265549-9265645,
           9265858-9266027,9267817-9267874,9268758-9269074
          Length = 527

 Score = 38.3 bits (85), Expect = 0.007
 Identities = 17/32 (53%), Positives = 22/32 (68%)
 Frame = +2

Query: 5   NRQVGHMLRTKLADANEGGVAAGLGALDSPYL 100
           N Q G+++RTK A  NEGGV AG   L+S +L
Sbjct: 495 NDQCGYLMRTKAASLNEGGVVAGYAFLNSVFL 526


>08_02_0984 + 23294646-23294677,23294805-23294892,23295450-23296226
          Length = 298

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = +2

Query: 641 INI*SRYK*DMPFAIAYYFKHLFKFQTSISFNKWIINLDFEENSLY 778
           INI S +  D PF +A   K +F  Q +   N+W I   FE  ++Y
Sbjct: 157 INIQSFWYKDDPFILATQSKKIFYLQDTSLGNEWRIVQKFEHRNMY 202


>05_05_0377 - 24498664-24500215,24500306-24500643
          Length = 629

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
 Frame = -3

Query: 323 IDLKLGIHVENTCT*WIG*YLYEVGLPTPVAG-ALMMRIFVEVRNDNVNFKCPAKRTGTA 147
           +D+KLG   E   T + G Y Y VG    VAG      +F  VR  NV     + +T  A
Sbjct: 400 VDVKLGHEYELVVTTYSGLYRYRVGDVLRVAGFKNAAPMFAFVRRKNVALSIDSDKTDEA 459

Query: 146 SV 141
            +
Sbjct: 460 EL 461


>02_01_0159 -
           1109249-1109280,1109334-1109397,1109524-1109627,
           1110270-1110373,1110450-1110840,1110956-1111161,
           1111650-1111885
          Length = 378

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = -2

Query: 255 GWTPYTSCGGVNDENLC-GGEK 193
           G  P TSCGG  +E +C GGE+
Sbjct: 239 GLNPKTSCGGTAEEMVCPGGEQ 260


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,031,027
Number of Sequences: 37544
Number of extensions: 363072
Number of successful extensions: 547
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 547
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)