Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0048
         (805 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    27   0.90 
Z22930-5|CAA80517.1|  275|Anopheles gambiae trypsin protein.           25   2.7  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    24   4.8  
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    24   4.8  

>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 26.6 bits (56), Expect = 0.90
 Identities = 9/26 (34%), Positives = 18/26 (69%)
 Frame = -3

Query: 260  YEVGLPTPVAGALMMRIFVEVRNDNV 183
            Y+ G+PTP++  + + ++V   NDN+
Sbjct: 1360 YDQGIPTPLSSTVDLIVYVRDVNDNL 1385


>Z22930-5|CAA80517.1|  275|Anopheles gambiae trypsin protein.
          Length = 275

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 243 YTSCGGVNDENLCGGEK 193
           Y+S GG+ D  LC G K
Sbjct: 203 YSSSGGITDRMLCAGYK 219


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +2

Query: 329 ARFSSYNGTSVKTTVDLYILVYKSTVRYEVFL 424
           A  + Y G   +T +  YI++ + T+ Y V L
Sbjct: 208 AYLNVYEGNPTETDITFYIIIRRKTLFYTVNL 239


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 162 LRWAFKINIIISHL 203
           LRW F +NI+IS L
Sbjct: 156 LRWLFSVNIVISVL 169


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 779,562
Number of Sequences: 2352
Number of extensions: 16337
Number of successful extensions: 25
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84823812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)