Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0046
         (799 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    24   1.6  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    22   6.5  

>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 14/58 (24%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = +1

Query: 37  GAMCLIRVF*LLNRVRVNSNLYGVGTAVVANISKRSNSIQILVN--FYAIENVKTIAL 204
           G +C+  +F   N+ R  SN       ++  ++  S SI ++VN  F   + ++T+ +
Sbjct: 53  GCLCIWSIFNKWNQFRSYSNFSVFLFDIITIVTLTSTSILLIVNAVFVKEKRIRTLLI 110


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +3

Query: 459 AHKLKSYLIAVYSNDWNLLQFTIKY 533
           A K+ ++++  Y N+WN  Q   KY
Sbjct: 96  AGKILTFVLLNYRNEWN--QLVAKY 118


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,366
Number of Sequences: 336
Number of extensions: 3255
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)