Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0046
         (799 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_1224 - 9888726-9888820,9889042-9889085,9889194-9889282,988...    32   0.46 
02_04_0289 + 21615745-21616155,21617417-21617870,21618162-216182...    28   9.9  

>01_01_1224 -
           9888726-9888820,9889042-9889085,9889194-9889282,
           9889390-9889434,9889849-9889956,9890042-9890127,
           9890324-9890411,9890669-9890872,9891251-9891326,
           9891429-9891478,9891753-9891815,9891942-9891995,
           9892079-9892181,9892266-9892368,9892563-9892623,
           9892746-9892786,9893183-9893348
          Length = 491

 Score = 32.3 bits (70), Expect = 0.46
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -1

Query: 163 LKFVWSWIVCLCLPLPLFQLHTNLS*LLHD*EVKK 59
           L F+++WI CLC  LP+  L   L  ++ D +V K
Sbjct: 43  LGFLYTWIACLCAALPIQSLFPYLYFMIRDLKVAK 77


>02_04_0289 +
           21615745-21616155,21617417-21617870,21618162-21618217,
           21618307-21618437,21618565-21618727
          Length = 404

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +3

Query: 513 LQFTIKYGYLYNCYGRSG 566
           LQ+ +  GYL+NC+G SG
Sbjct: 119 LQYWMDEGYLHNCFGPSG 136


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,640,241
Number of Sequences: 37544
Number of extensions: 338040
Number of successful extensions: 532
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 532
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)