Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0045
(812 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0232 + 14030821-14030904,14031029-14031374,14031475-140315... 86 4e-17
01_03_0231 + 14014243-14014390,14015053-14015141,14017859-140179... 76 4e-14
07_03_0061 + 12972944-12973054,12974509-12974536,12974701-129748... 54 1e-07
03_01_0529 - 3968813-3968983,3969060-3969116,3969215-3969526,396... 30 2.5
07_03_1011 + 23292086-23292149,23292407-23293663,23294312-232943... 29 4.4
11_02_0082 - 8088169-8088284,8088613-8088697,8090344-8090442,809... 29 5.8
02_04_0080 - 19529575-19529643,19529756-19529938,19530061-195302... 29 5.8
01_06_0772 - 31864564-31864653,31864733-31864816,31865547-318656... 29 5.8
>01_03_0232 +
14030821-14030904,14031029-14031374,14031475-14031599,
14031927-14032023,14032459-14032691,14032765-14032885,
14033319-14033374,14033630-14033703,14034193-14034239,
14034458-14034507,14034860-14034922,14035160-14035240,
14035517-14035627,14035714-14035789,14036216-14036358,
14036775-14036848,14037304-14037409,14037492-14037547,
14038272-14038378,14041150-14041598
Length = 832
Score = 85.8 bits (203), Expect = 4e-17
Identities = 41/100 (41%), Positives = 62/100 (62%)
Frame = +3
Query: 510 LLQSDTDDTVSPIEGHYKKLKAEIAPLDKTTDEFEMILEYVRNTHGKTHNFYTLNVEEVF 689
LL+ D+ D P+ YK+L + PL+ ++E+ MI Y+ NTHGKTH YT++V ++F
Sbjct: 424 LLEDDSTDQDDPLYARYKQLSCDFTPLEVGSEEYSMIKTYLANTHGKTHTSYTVDVVQIF 483
Query: 690 KVIREGEDKRYQALSRNSTTGRLLWHGFPQPXXFAGFISQ 809
KV R GE +R+Q + + LLWHG + +AG +SQ
Sbjct: 484 KVSRHGEMERFQKFA-TAGNRMLLWHG-SRLTNWAGILSQ 521
Score = 70.5 bits (165), Expect = 1e-12
Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
Frame = +1
Query: 235 LARIRVGTEKMPLGKLSKKQIKAGYKVLSELQNLIKSGDASRNKIVDATNRFFTLIPHDF 414
+ I ++K+PLGKLSK I GY VL + N+I D R ++ T F+T+IPHDF
Sbjct: 332 MVEIGYNSDKLPLGKLSKSTIFKGYDVLKRISNVISRAD--RRQLEQLTGEFYTVIPHDF 389
Query: 415 GVNNAP--LLDNNEIIKTKTDMMDNLLEIEIA 504
G ++D + +K K +M++ L EIEIA
Sbjct: 390 GFKKMREFIIDTPQKLKAKLEMVEALGEIEIA 421
Score = 41.5 bits (93), Expect = 8e-04
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Frame = +2
Query: 11 DNALDRFQALYEEKTENRWKDRNNFVKIPGRYFPLEIDYGDNETKT-LTVDP------KC 169
+ A+ F+ + KT N W DR +F +Y LE+DYG+ + +T V P +
Sbjct: 250 EQAIYEFEGKFHGKTNNHWSDRKSFECYARKYTWLEMDYGEADRETNKKVSPSTDQIKET 309
Query: 170 ELAEPVQRLIVTIFDIHYMKQTLLE 244
+L + I I +I MKQ ++E
Sbjct: 310 KLETRIASFISLICNISMMKQQMVE 334
>01_03_0231 +
14014243-14014390,14015053-14015141,14017859-14017949,
14018088-14018215,14018703-14018784,14019022-14019081,
14019160-14019251,14019342-14019462,14019873-14019928,
14020193-14020272,14020774-14020820,14020940-14020989,
14021304-14021366,14021515-14021595,14021703-14021717,
14021875-14021985,14022072-14022147,14022350-14022492,
14022721-14022794,14023364-14023454,14023589-14023687
Length = 598
Score = 75.8 bits (178), Expect = 4e-14
Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Frame = +1
Query: 235 LARIRVGTEKMPLGKLSKKQIKAGYKVLSELQNLIKSGDASRNKIVDATNRFFTLIPHDF 414
+ I +K+PLGKLSK I GY VL + N+I D R ++ T F+++IPHDF
Sbjct: 267 MVEIGYNADKLPLGKLSKSTILKGYDVLKRISNVISGADTDRTQLEQLTGEFYSVIPHDF 326
Query: 415 GVNNAP--LLDNNEIIKTKTDMMDNLLEIEIA 504
G ++D + +K K +M++ L EIEIA
Sbjct: 327 GFKKMSEFIIDTPQKLKAKLEMVEALSEIEIA 358
Score = 74.5 bits (175), Expect = 9e-14
Identities = 39/105 (37%), Positives = 62/105 (59%), Gaps = 5/105 (4%)
Frame = +3
Query: 510 LLQSDTDDTVSPIEGHYKKLKAEIAPLDKTTDEFEMILE-----YVRNTHGKTHNFYTLN 674
LL+ D+ D P+ YK+ + PL+ ++E+ M E Y+ NTHGKTH YT++
Sbjct: 361 LLEDDSSDQDHPLYARYKQFCCDFTPLEVDSEEYSMARERKIKTYLTNTHGKTHTGYTVD 420
Query: 675 VEEVFKVIREGEDKRYQALSRNSTTGRLLWHGFPQPXXFAGFISQ 809
+ ++FKV R GE +R+Q + ++ LLWHG + +AG +SQ
Sbjct: 421 IVQIFKVSRLGEMERFQKFA-SAGNRMLLWHG-SRLTNWAGILSQ 463
>07_03_0061 +
12972944-12973054,12974509-12974536,12974701-12974870,
12975878-12976043,12976122-12976425,12977155-12977350,
12977464-12977622,12978311-12978371,12978904-12978967,
12979099-12979346,12980039-12980250,12980344-12980456,
12980547-12980623,12980710-12980873,12981493-12981564,
12981565-12981760,12981813-12981854,12982358-12982440,
12982534-12982671,12982942-12983124,12983216-12983263
Length = 944
Score = 54.4 bits (125), Expect = 1e-07
Identities = 27/66 (40%), Positives = 43/66 (65%), Gaps = 5/66 (7%)
Frame = +1
Query: 223 HEADLARIRVGTEKMPLGKLSKKQIKAGYKVLSELQNLIKSGD-----ASRNKIVDATNR 387
+ A + ++ +MPLGKLSK+ I+ G++ L+E+QNL+ + + + IV A+NR
Sbjct: 610 YRAAMLEFKINMSEMPLGKLSKENIQKGFEALTEIQNLLGNTNNQELAVRESLIVAASNR 669
Query: 388 FFTLIP 405
FFTLIP
Sbjct: 670 FFTLIP 675
Score = 54.0 bits (124), Expect = 1e-07
Identities = 29/85 (34%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Frame = +2
Query: 14 NALDRFQALYEEKTEN---RWKDRNNFVKIPGRYFPLEIDYGDNE-TKTLTVDP-KCELA 178
+A+ F+ L+ EKT N W+ + NF K PG+++PL+IDYG + K +D K L
Sbjct: 535 HAIQEFRRLFLEKTGNPWEAWEQKTNFQKQPGKFYPLDIDYGVRQGPKRKDIDKMKSSLP 594
Query: 179 EPVQRLIVTIFDIHYMKQTLLEFEL 253
+ L+ +F+I + +LEF++
Sbjct: 595 PQLLELMNMLFNIETYRAAMLEFKI 619
Score = 41.9 bits (94), Expect = 6e-04
Identities = 18/53 (33%), Positives = 33/53 (62%)
Frame = +3
Query: 510 LLQSDTDDTVSPIEGHYKKLKAEIAPLDKTTDEFEMILEYVRNTHGKTHNFYT 668
L+ D+D+ S ++ YKKL+ I PL ++++++ +Y+ NTH TH Y+
Sbjct: 731 LVGFDSDNDES-LDDKYKKLRCAITPLPHDCEDYKLVEKYLLNTHAPTHKAYS 782
>03_01_0529 -
3968813-3968983,3969060-3969116,3969215-3969526,
3969606-3970298,3971473-3971763
Length = 507
Score = 29.9 bits (64), Expect = 2.5
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 220 LHEADLARIRVGTEKMPLGK-LSKKQIKAGYKVLSELQNLIKSGDASRNKIVDATNRF 390
L EA+LA +GT K +G S K + G +V +L+++ GD DAT+RF
Sbjct: 180 LREAELANSFIGTTKRGIGPCYSSKVTRNGLRV-CDLRHMDTFGDKLDVLFKDATSRF 236
>07_03_1011 +
23292086-23292149,23292407-23293663,23294312-23294316,
23294566-23294593,23294664-23294724,23295205-23295259
Length = 489
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -3
Query: 585 ALSPPSASCSGLRWGSPCRQCLIVIDIRNFNFQQVIH 475
A P SA+CS ++ G PC + ++ + ++ F H
Sbjct: 382 ACGPGSANCSAIQPGQPCYKSDDIVAVASYAFNDYYH 418
>11_02_0082 -
8088169-8088284,8088613-8088697,8090344-8090442,
8090537-8090609,8090694-8090804,8090901-8091074,
8091184-8091574,8091662-8092283,8092379-8093251,
8093294-8093800
Length = 1016
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = -2
Query: 115 QREVSPRNLDKVIPVFPTVLSFFFVQRL 32
+R+ PR+ +K IP+ P+V +FF V +L
Sbjct: 644 KRQFKPRSPEKKIPIDPSVRNFFRVPQL 671
>02_04_0080 -
19529575-19529643,19529756-19529938,19530061-19530210,
19530297-19530379,19530497-19530599,19530709-19530918,
19531023-19531183,19531275-19531351,19531483-19531610,
19531695-19531935,19532047-19532180,19532261-19532435,
19532587-19532656,19532746-19532803,19532887-19532994,
19533088-19533283,19533381-19533727,19534008-19534034,
19534334-19534336
Length = 840
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +3
Query: 543 PIEGHYKKLKAEIAPLDKTTDEFEMILEYVRNTHGKT---HNFYTLNVEEVFKV 695
P+ YKKL I + + +++++MIL+Y+ T+ Y+ VE ++ V
Sbjct: 604 PLSQCYKKLGCSINRVVEDSEDYKMILKYLEKTYEPVKVGDVVYSATVERIYAV 657
>01_06_0772 -
31864564-31864653,31864733-31864816,31865547-31865603,
31865700-31865828,31866704-31866790,31866856-31866933,
31867150-31867306,31868000-31868141,31868835-31868986,
31869118-31869371,31869819-31869896
Length = 435
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/81 (23%), Positives = 36/81 (44%)
Frame = -2
Query: 244 FEQGLLHVVDVKDGDDESLHGLGELTLGVDSECFRLIVTVVYFQREVSPRNLDKVIPVFP 65
F G +KD D S+ G G +T +D + + +Y Q +SP+N + +
Sbjct: 348 FASGFKRAFKIKDFGD-SIPGHGGITDRMDCQMVMAVFAYIYHQSFISPQNYSVELILEQ 406
Query: 64 TVLSFFFVQRLESVQSVIEIF 2
+ + F ++ Q + EI+
Sbjct: 407 ILRNLTFEEQKFLYQQLGEIY 427
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,349,405
Number of Sequences: 37544
Number of extensions: 441033
Number of successful extensions: 1250
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1245
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2221181676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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