Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0045
         (812 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     30   0.098
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    25   2.8  
AY146749-1|AAO12064.1|  336|Anopheles gambiae odorant-binding pr...    24   6.4  

>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 29.9 bits (64), Expect = 0.098
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -2

Query: 805 EIKPAXFXGCGKPCHKRRPVVEFLER 728
           E KP     CG+P HK+R   EFL R
Sbjct: 70  ESKPGACFFCGQPGHKKRDCKEFLNR 95


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +3

Query: 498 NCVCLLQSDTDDTVSPIEG 554
           +C C+LQ++  +++SP  G
Sbjct: 413 HCTCMLQNNARESISPASG 431


>AY146749-1|AAO12064.1|  336|Anopheles gambiae odorant-binding
           protein AgamOBP38 protein.
          Length = 336

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 10/22 (45%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
 Frame = -3

Query: 594 CRAAL-SPPSASCSGLRWGSPC 532
           C A L +PP+ SC+G  W   C
Sbjct: 110 CVAELPAPPADSCAGAYWSFRC 131


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 819,761
Number of Sequences: 2352
Number of extensions: 16823
Number of successful extensions: 34
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86071221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)