Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0044
         (802 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           23   3.3  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           23   3.3  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    22   5.8  
M29491-1|AAA27726.1|   79|Apis mellifera protein ( Bee homeobox-...    22   7.6  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    22   7.6  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   7.6  

>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +2

Query: 182 DSVRSDAGAGNRRQAVRSEHRHLQDLGRKY 271
           D VR +  A     A  S H H + LGR++
Sbjct: 27  DRVRGNGNAIVSNSASNSVHGHREGLGRRH 56


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +2

Query: 182 DSVRSDAGAGNRRQAVRSEHRHLQDLGRKY 271
           D VR +  A     A  S H H + LGR++
Sbjct: 28  DRVRGNGNAIVSNSASNSVHGHREGLGRRH 57


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = +2

Query: 74  PRQGPRREPEAAAGLRRP 127
           P    RREPEA  G  RP
Sbjct: 112 PHPRLRREPEAEPGNNRP 129



 Score = 22.2 bits (45), Expect = 5.8
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = +2

Query: 74  PRQGPRREPEAAAGLRRP 127
           P    RREPEA  G  RP
Sbjct: 138 PHPRLRREPEAEPGNNRP 155


>M29491-1|AAA27726.1|   79|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H17. ).
          Length = 79

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 165 PEFKPKTPFGQMPVLEIDGK 224
           P  KP+TPF    +L ++ K
Sbjct: 8   PNRKPRTPFTTQQLLSLEKK 27


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 9/42 (21%), Positives = 19/42 (45%)
 Frame = +1

Query: 112 WLTAARSSKTIAFHLKTGQNSNLRLRSVRCRCWKSTASSTLR 237
           WL    S+     +    ++     +S+ C+C+    ++TLR
Sbjct: 49  WLGYCNSAINPCIYALFSKDFRFAFKSIICKCFCKRRTNTLR 90


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 9/42 (21%), Positives = 19/42 (45%)
 Frame = +1

Query: 112 WLTAARSSKTIAFHLKTGQNSNLRLRSVRCRCWKSTASSTLR 237
           WL    S+     +    ++     +S+ C+C+    ++TLR
Sbjct: 497 WLGYCNSAINPCIYALFSKDFRFAFKSIICKCFCKRRTNTLR 538


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,677
Number of Sequences: 438
Number of extensions: 3087
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25367793
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)