Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0042
(594 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0111 - 12638078-12639328,12640886-12641146 104 5e-23
05_01_0436 + 3466397-3466654,3467336-3467410,3468321-3469571 83 2e-16
01_03_0153 + 13255667-13255954,13258383-13258529,13258798-132589... 56 3e-08
05_01_0413 - 3253345-3253461,3253595-3253666,3253763-3253876,325... 53 2e-07
02_05_1191 + 34856635-34856775,34856878-34856942,34857096-348571... 52 3e-07
03_01_0439 + 3409422-3409795,3410672-3410897,3411004-3411282,341... 44 1e-04
10_08_0003 - 13992276-13992311,13992461-13992598,13992682-139928... 40 0.001
10_08_0357 - 17158414-17160150,17160534-17160710 38 0.008
07_03_1550 + 27641099-27641288,27641433-27641646,27641738-276418... 37 0.014
10_08_0359 - 17167829-17169595,17169976-17169996 36 0.018
10_08_0354 - 17104223-17106061,17106770-17106794,17107317-171075... 36 0.024
02_04_0656 - 24769069-24770814,24771552-24771608,24773307-247735... 34 0.098
02_01_0675 - 5028910-5030379 33 0.13
11_06_0148 + 20631949-20632338,20632838-20633044,20633168-206332... 33 0.17
07_01_0254 - 1893079-1893181,1893455-1893492,1893586-1893706,189... 31 0.92
04_04_0047 + 22346962-22347437,22347874-22348036,22348143-223482... 31 0.92
10_08_0628 + 19389508-19389637,19389774-19389850,19390332-193904... 30 1.6
05_04_0299 - 19958776-19958858,19958883-19959012,19960131-199601... 29 2.1
04_04_0783 - 28040828-28041615,28041942-28043589 29 2.1
01_06_1696 + 39256171-39256393,39256513-39256595,39256692-392568... 29 2.8
01_05_0470 + 22531210-22531530,22532423-22532594,22532685-225328... 29 2.8
01_01_0028 + 209283-209563,209659-209890,210015-210160,210694-21... 29 3.7
11_01_0019 + 135610-136296,136736-137275,137367-137518,137683-13... 28 4.9
06_02_0181 - 12694304-12694398,12694512-12695547 28 4.9
02_05_1061 - 33825948-33825995,33826094-33826243,33827154-338273... 28 4.9
04_04_0214 - 23674270-23676858,23677574-23680843,23680941-236811... 28 6.5
02_05_0502 + 29569563-29570487,29570548-29570621 28 6.5
02_04_0225 - 21063445-21063636,21063726-21063911,21064052-210641... 28 6.5
02_01_0273 + 1822370-1822503,1822913-1823258,1823393-1823635,182... 27 8.5
>01_03_0111 - 12638078-12639328,12640886-12641146
Length = 503
Score = 104 bits (250), Expect = 5e-23
Identities = 48/86 (55%), Positives = 59/86 (68%)
Frame = +2
Query: 254 LGGTCLNVGCIPSKALLHNSHLYHMAKHDFKQRGIETGEVTFDFKKMMEYKANAVKGLTG 433
LGGTCLNVGCIPSKALLH+SH+YH AK F G++ + D MM K AV GLT
Sbjct: 74 LGGTCLNVGCIPSKALLHSSHMYHEAKSSFAHHGVKFSNLEVDLPAMMAQKDKAVAGLTK 133
Query: 434 GIAMLFQKNKVNLVKGVGTIVAPNKL 511
GI LF+KNKV VKG G + +P+++
Sbjct: 134 GIEGLFKKNKVTYVKGFGKLASPSEV 159
Score = 53.6 bits (123), Expect = 1e-07
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = +3
Query: 150 DADLVVIGSGPGGYVAAIKAAQLGMKVVSVEKDPT 254
++D+VV+G GPGGYVAAIKAAQLG+K +EK T
Sbjct: 39 ESDVVVVGGGPGGYVAAIKAAQLGLKTTCIEKRGT 73
>05_01_0436 + 3466397-3466654,3467336-3467410,3468321-3469571
Length = 527
Score = 82.6 bits (195), Expect = 2e-16
Identities = 50/111 (45%), Positives = 59/111 (53%), Gaps = 25/111 (22%)
Frame = +2
Query: 254 LGGTCLNVGCIPSK-------------------------ALLHNSHLYHMAKHDFKQRGI 358
LGGTCLNVGCIPSK ALLH+SH+YH AK F GI
Sbjct: 73 LGGTCLNVGCIPSKEVMNHFDPFYLAVPSIYYELRSTMGALLHSSHMYHEAKASFAHHGI 132
Query: 359 ETGEVTFDFKKMMEYKANAVKGLTGGIAMLFQKNKVNLVKGVGTIVAPNKL 511
+ + D MM K AV GLT GI LF+KNKV VKG G V+P+++
Sbjct: 133 KFSNLEIDLPAMMSQKDKAVAGLTKGIEGLFKKNKVEYVKGFGKFVSPSEV 183
Score = 54.8 bits (126), Expect = 5e-08
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = +3
Query: 138 ATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEKDPT 254
A ++D+VVIG GPGGYVAAIKAAQLG+K +EK T
Sbjct: 34 AAGEESDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGT 72
>01_03_0153 +
13255667-13255954,13258383-13258529,13258798-13258932,
13259344-13259461,13260925-13261049,13261407-13261532,
13261617-13261697,13262188-13262250,13262328-13262402,
13263439-13263517,13263627-13263727,13263952-13264065,
13264225-13264338,13264406-13264477,13264561-13264608
Length = 561
Score = 55.6 bits (128), Expect = 3e-08
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Frame = +2
Query: 242 KGPYLGGTCLNVGCIPSKALLHNSHLYH--MAKHDFKQRGIETGEVTFDFKKMMEYKANA 415
+G +GGTC+N GC+PSKALL S +H K G++ +D + + ++ N
Sbjct: 104 EGDVVGGTCVNRGCVPSKALLAVSGRMRELQDEHHMKSLGLQVSTAGYDRQAVADHANNL 163
Query: 416 VKGLTGGIAMLFQKNKVNLVKGVGTIVAPNKLKY 517
+ + + V+++ G GTIV K++Y
Sbjct: 164 ASKIRSNLTNSMKALGVDILTGFGTIVGKQKVRY 197
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +3
Query: 150 DADLVVIGSGPGGYVAAIKAAQLGMKVVSVEKD 248
D DLV+IG+G GG+ AA+ A + G+K +E D
Sbjct: 74 DYDLVIIGAGVGGHGAALHAVEKGLKTAIIEGD 106
>05_01_0413 -
3253345-3253461,3253595-3253666,3253763-3253876,
3254050-3254163,3254420-3254520,3254616-3254694,
3254789-3254863,3254955-3255017,3255281-3255361,
3255449-3255574,3255898-3256022,3256722-3256839,
3257420-3257554,3258029-3258175,3259016-3259321
Length = 590
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Frame = +2
Query: 242 KGPYLGGTCLNVGCIPSKALLHNSHLYHMA--KHDFKQRGIETGEVTFDFKKMMEYKANA 415
+G +GGTC+N GC+PSKALL S +H K G++ +D + + ++ N
Sbjct: 110 EGDVVGGTCVNRGCVPSKALLAVSGRMRELHDEHHMKSLGLQVSSPGYDRQAVADHANNL 169
Query: 416 VKGLTGGIAMLFQKNKVNLVKGVGTIVAPNKLKY 517
+ + + V+++ G G IV K++Y
Sbjct: 170 ASKIRSNLTNSMKALGVDILSGFGAIVGKQKVRY 203
Score = 37.1 bits (82), Expect = 0.011
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +3
Query: 150 DADLVVIGSGPGGYVAAIKAAQLGMKVVSVEKD 248
D DLV+IG+G GG+ AA+ A + G+K +E D
Sbjct: 80 DYDLVIIGAGVGGHGAALHAVEEGLKTAIIEGD 112
>02_05_1191 +
34856635-34856775,34856878-34856942,34857096-34857165,
34857499-34857570,34857668-34857871,34858793-34858866,
34858965-34859048,34859582-34859669,34859763-34859844,
34860178-34860251,34860474-34860581,34860683-34860747,
34861317-34861430,34861644-34861743,34861840-34861893,
34861972-34862067
Length = 496
Score = 52.4 bits (120), Expect = 3e-07
Identities = 26/90 (28%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Frame = +2
Query: 257 GGTCLNVGCIPSKALLHNSHLYHMAKHDFKQRGIE-TGEVTFDFKKMMEYKANAVKGLTG 433
GGTC+ GC+P K L++ S + D K G E G++ F++K+++E K + L G
Sbjct: 67 GGTCVIRGCVPKKILVYGSS-FRGEFEDAKNFGWEINGDINFNWKRLLENKTQEIVRLNG 125
Query: 434 GIAMLFQKNKVNLVKGVGTIVAPNKLKYTE 523
+ + V +++G G++V + ++ T+
Sbjct: 126 VYQRILGNSGVTMIEGAGSLVDAHTVEVTK 155
>03_01_0439 +
3409422-3409795,3410672-3410897,3411004-3411282,
3411374-3411550,3411653-3411706,3411806-3411954,
3412534-3412597,3412670-3412840,3412922-3413059,
3413180-3413215
Length = 555
Score = 43.6 bits (98), Expect = 1e-04
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
Frame = +2
Query: 254 LGGTCLNVGCIPSKALLHNSHLYHMAKHDFKQRGIETGEVTFDFKKMMEYKANAVKGLTG 433
+GGTC+ GC+P K L++ S H + + + D+ ++ K ++ L G
Sbjct: 122 VGGTCVLRGCVPKKLLVYGSKYSHEFEESHGFGWVYETDPKHDWNTLIANKNTELQRLVG 181
Query: 434 GIAMLFQKNKVNLVKGVGTIVAPNKLK-----YTERRVL 535
+ + V L++G G IV P+ + YT R +L
Sbjct: 182 IYKNILNNSGVTLIEGRGKIVDPHTVSVDGKLYTARNIL 220
>10_08_0003 -
13992276-13992311,13992461-13992598,13992682-13992852,
13992926-13992989,13993404-13993552,13993700-13993753,
13993894-13994034,13994134-13994412,13994518-13994743,
13995328-13995734
Length = 554
Score = 39.9 bits (89), Expect = 0.001
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 7/101 (6%)
Frame = +2
Query: 254 LGGTCLNVGCIPSKALLHNSHLYH--MAKHDFKQRGIETGEVTFDFKKMMEYKANAVKGL 427
+GGTC+ GC+P K L++ S H H F R E D+ +M K ++ L
Sbjct: 133 VGGTCVLRGCVPKKLLVYASKYSHEFEESHGFGWR--YGTEPKHDWSTLMTNKNLELQRL 190
Query: 428 TGGIAMLFQKNKVNLVKGVGTIVAPNKLK-----YTERRVL 535
G + + + V +++G G +V P+ + YT + +L
Sbjct: 191 VGVQTNMLKNSGVTIIEGRGKVVDPHTVSVDGKLYTAKNIL 231
>10_08_0357 - 17158414-17160150,17160534-17160710
Length = 637
Score = 37.5 bits (83), Expect = 0.008
Identities = 23/47 (48%), Positives = 26/47 (55%)
Frame = +3
Query: 105 GSLVRIATRQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEK 245
G V+ T + T D VV+GSG GG VAA A G KVV VEK
Sbjct: 120 GLAVKTGTAAHHTVQ-CDAVVVGSGCGGGVAAAVLASKGYKVVVVEK 165
>07_03_1550 +
27641099-27641288,27641433-27641646,27641738-27641843,
27642213-27642257,27642275-27642540,27642980-27642991,
27643201-27643480,27643716-27643823,27644276-27644362,
27644448-27644552,27644995-27645125,27645249-27645309
Length = 534
Score = 36.7 bits (81), Expect = 0.014
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +3
Query: 156 DLVVIGSGPGGYVAAIKAAQLGMKVVSVE 242
+LV+IGSGP GY AAI AA+ +K V E
Sbjct: 71 NLVIIGSGPAGYTAAIYAARANLKPVVFE 99
>10_08_0359 - 17167829-17169595,17169976-17169996
Length = 595
Score = 36.3 bits (80), Expect = 0.018
Identities = 22/47 (46%), Positives = 24/47 (51%)
Frame = +3
Query: 105 GSLVRIATRQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEK 245
G VR T D V++GSG GG VAA A G KVV VEK
Sbjct: 71 GLAVRPGASDEHHTVRCDAVIVGSGCGGGVAAAVLASAGYKVVVVEK 117
>10_08_0354 -
17104223-17106061,17106770-17106794,17107317-17107561,
17108432-17108677
Length = 784
Score = 35.9 bits (79), Expect = 0.024
Identities = 19/30 (63%), Positives = 20/30 (66%)
Frame = +3
Query: 156 DLVVIGSGPGGYVAAIKAAQLGMKVVSVEK 245
D VV+GSG GG VAA A G KVV VEK
Sbjct: 262 DAVVVGSGCGGGVAAAVLASAGYKVVVVEK 291
>02_04_0656 -
24769069-24770814,24771552-24771608,24773307-24773582,
24773675-24773965
Length = 789
Score = 33.9 bits (74), Expect = 0.098
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +3
Query: 150 DADLVVIGSGPGGYVAAIKAAQLGMKVVSVEK 245
+ D+ ++GSG GG VAA A G KVV +EK
Sbjct: 281 ECDVAIVGSGCGGGVAAAVLAGAGHKVVVIEK 312
>02_01_0675 - 5028910-5030379
Length = 489
Score = 33.5 bits (73), Expect = 0.13
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 138 ATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEKDP 251
A + DL V+G GP G A + A+ G+ V +++ P
Sbjct: 63 ARSTPVDLAVVGGGPAGLAVAQRVAEAGLSVCAIDPSP 100
>11_06_0148 +
20631949-20632338,20632838-20633044,20633168-20633267,
20633478-20633560,20633656-20633712,20633790-20633942,
20634016-20634094,20634279-20634427,20634541-20634675,
20634783-20634896,20635065-20635175,20635338-20635373,
20635675-20635884
Length = 607
Score = 33.1 bits (72), Expect = 0.17
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +3
Query: 156 DLVVIGSGPGGYVAAIKAAQLGMKVVSVEK 245
D +V+GSG GG VAA + A G +V+ +EK
Sbjct: 70 DAIVVGSGIGGMVAATQLAAKGARVLVLEK 99
>07_01_0254 -
1893079-1893181,1893455-1893492,1893586-1893706,
1893800-1893869,1894231-1894401,1894485-1894659,
1894746-1894933,1895023-1895166,1895316-1895379,
1895464-1895556,1895649-1895734,1896434-1896574,
1896658-1896804,1896970-1897057,1898080-1898235,
1898428-1898577
Length = 644
Score = 30.7 bits (66), Expect = 0.92
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = +3
Query: 90 PTFRSGSLVRIATRQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEK 245
P+ L+R + H D VV+G+G G AAI ++ G + K
Sbjct: 39 PSIPRPQLIRATSSYTVVDHSYDAVVVGAGGAGLRAAIGLSEHGFNTACITK 90
>04_04_0047 +
22346962-22347437,22347874-22348036,22348143-22348217,
22348302-22348402,22348488-22348603,22348693-22348904,
22349033-22349124,22349319-22349433,22349654-22349757,
22349881-22349926,22350007-22350071,22350192-22350272,
22350356-22350410,22350623-22350711,22350802-22350889,
22351011-22351091
Length = 652
Score = 30.7 bits (66), Expect = 0.92
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +3
Query: 99 RSGSLVRIAT-RQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEKD 248
R G+ V +A A A ++V G G GG V A+ A + G +VV +E+D
Sbjct: 52 RHGATVAMAMPAAQAAGRRARVLVAGGGIGGLVFALAAKRKGFEVVVLERD 102
>10_08_0628 +
19389508-19389637,19389774-19389850,19390332-19390438,
19390545-19390626,19390702-19390814,19391023-19391086,
19391192-19391266,19391691-19391807,19392131-19392199,
19392319-19392411,19392733-19392835,19393040-19393164,
19393317-19393366,19393477-19393543,19393663-19393742,
19394038-19394166,19394274-19394340,19394429-19394512
Length = 543
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 156 DLVVIGSGPGGYVAAIKAAQL 218
D+VV+G+GP G AAI+ QL
Sbjct: 4 DVVVVGAGPAGLAAAIRLKQL 24
>05_04_0299 -
19958776-19958858,19958883-19959012,19960131-19960175,
19960252-19960370,19960450-19960543,19961824-19961985,
19962117-19962266,19962472-19962537,19962934-19962981,
19963654-19963866,19963953-19964078,19964155-19964232,
19964600-19964671,19965522-19965953,19966863-19966925,
19967497-19967898
Length = 760
Score = 29.5 bits (63), Expect = 2.1
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +3
Query: 159 LVVIGSGPGGYVAAIKAAQLGMKVVSVEK 245
+ V+GSGP G A++ +LG +V +E+
Sbjct: 241 VAVVGSGPSGLFASLVLGELGAEVTLIER 269
>04_04_0783 - 28040828-28041615,28041942-28043589
Length = 811
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +3
Query: 51 LLNMGYKFL-KLASPTFRSGSLVRIATRQYATTHDADLVVIGSGPGGYVAAIKAAQLGMK 227
LLN Y FL F ++ + T H+ ++V+G+G G AA + G K
Sbjct: 164 LLNAAYSFLVSHGHINFGVAPAIKERIPKEPTRHNT-VIVVGAGLAGLAAARQLVAFGFK 222
Query: 228 VVSVE 242
VV +E
Sbjct: 223 VVVLE 227
>01_06_1696 +
39256171-39256393,39256513-39256595,39256692-39256831,
39256882-39257398,39257518-39257565,39257832-39258006,
39258122-39258234,39258329-39258425,39258579-39258798,
39258985-39259144,39259233-39259646
Length = 729
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +3
Query: 69 KFLKLASPTFRSGSLVRIATRQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEKD 248
+ L L P F SL T T H +V++G+GP G V + + G+K +EK+
Sbjct: 28 RLLLLQRPLF--SSLAGGGTGDDVTPH-LPVVIVGAGPVGLVLSFLLTKFGIKCAVLEKN 84
>01_05_0470 +
22531210-22531530,22532423-22532594,22532685-22532820,
22532913-22533126,22533295-22533438,22533528-22533635,
22533724-22533820,22533904-22534035,22534188-22534320,
22534439-22534604
Length = 540
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 156 DLVVIGSGPGGYVAAIKAAQLGMKVVSVEKD 248
DLV+IG GP G A ++A+ G+ V + D
Sbjct: 119 DLVIIGCGPAGLSLAAESAKKGLNVGLIGPD 149
>01_01_0028 +
209283-209563,209659-209890,210015-210160,210694-210724,
211433-211579,212490-212639,212741-212788
Length = 344
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = -1
Query: 423 PLTALALYSIIFLKSNVTSPVSIPLCLKSCLAIW*RCELCSKAFDGIHP 277
PL+ + ++++ S T P S C K+C+ + C LC GI P
Sbjct: 69 PLSCMVCHALLHQSSKCT-PCSHKFC-KACILRFKDCPLCGADIQGIEP 115
>11_01_0019 +
135610-136296,136736-137275,137367-137518,137683-137959
Length = 551
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 4/42 (9%)
Frame = +2
Query: 137 CYHT*C---RSCCYRFGPWWI-RSSY*SCPAWHEGGLSRKGP 250
CYH C CY G W + + SCP W E + R P
Sbjct: 454 CYHMTCVCGYEFCYTCGKEWKEKKATCSCPLWDERNIIRDDP 495
>06_02_0181 - 12694304-12694398,12694512-12695547
Length = 376
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 153 ADLVVIGSGPGGYVAAIKAAQLGMKVVSVE 242
A + +IGSGP + AA+ AA+ +K V E
Sbjct: 48 ARVCIIGSGPAAHTAAVYAARAELKPVLFE 77
>02_05_1061 -
33825948-33825995,33826094-33826243,33827154-33827300,
33827381-33827468,33828569-33828714,33828861-33829089,
33829193-33829482
Length = 365
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = -1
Query: 423 PLTALALYSIIFLKSNVTSPVSIPLCLKSCLAIW*RCELCSKAFDGIHP 277
PL+ + ++++ S T P S C K+C+ + C LC GI P
Sbjct: 72 PLSCVVCHALLHQSSKCT-PCSHKFC-KACILRFKDCPLCGADIQGIEP 118
>04_04_0214 -
23674270-23676858,23677574-23680843,23680941-23681119,
23681200-23681559,23681645-23682086,23682199-23682332,
23682479-23682680
Length = 2391
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 150 DADLVVIGSGPGGYVAAIKAAQLGMKVVSV-EKDPT*EVLVSMLDV 284
D + ++G+GP G AA A+LG + V++ EK T + +D+
Sbjct: 21 DTRIGIVGAGPSGLSAAYALAKLGYRNVTLFEKCHTVSGMCESIDI 66
>02_05_0502 + 29569563-29570487,29570548-29570621
Length = 332
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 165 VIGSGPGGYVAAIKAAQLGMKVVSVE 242
+IGSGP + AAI AA+ +K V E
Sbjct: 15 IIGSGPSAHTAAIYAARAELKPVLFE 40
>02_04_0225 -
21063445-21063636,21063726-21063911,21064052-21064138,
21064589-21064648,21064984-21065052,21065684-21065837,
21066127-21066203,21066634-21066679,21067167-21067253,
21067653-21067799,21069042-21069304
Length = 455
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/81 (20%), Positives = 35/81 (43%)
Frame = +2
Query: 317 LYHMAKHDFKQRGIETGEVTFDFKKMMEYKANAVKGLTGGIAMLFQKNKVNLVKGVGTIV 496
+Y ++ ++ I +G++ FKK+ E+ +K T I L + ++ +G
Sbjct: 247 MYGLSHRKLLRQLIMSGDIDSAFKKLGEWYPQVIKDETSIICFLLHSQR--FIEFIGAGQ 304
Query: 497 APNKLKYTERRVLRLLIPKIF 559
+ +KY + L K F
Sbjct: 305 LEDAVKYARSNLANFLTHKAF 325
>02_01_0273 +
1822370-1822503,1822913-1823258,1823393-1823635,
1824212-1824268,1824407-1824487,1824725-1824786,
1824990-1826004
Length = 645
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 132 QYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEKDP 251
Q TT D VVIGSG G A++ ++ G + + +P
Sbjct: 78 QDETTKYFDFVVIGSGVAGLRYALEVSKYGSVAIITKAEP 117
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,271,671
Number of Sequences: 37544
Number of extensions: 347385
Number of successful extensions: 999
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 998
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1411925004
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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