Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0042
(594 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82277-3|CAB05249.2| 495|Caenorhabditis elegans Hypothetical pr... 122 2e-28
U61947-1|AAB03136.3| 667|Caenorhabditis elegans Thioredoxin red... 52 3e-07
AF162693-1|AAD46625.1| 525|Caenorhabditis elegans thioredoxin r... 52 3e-07
AF148217-1|AAD41826.1| 667|Caenorhabditis elegans thioredoxin r... 52 3e-07
Z81449-2|CAD88214.1| 459|Caenorhabditis elegans Hypothetical pr... 45 4e-05
Z81449-1|CAB03763.1| 473|Caenorhabditis elegans Hypothetical pr... 45 4e-05
Z11115-10|CAA77459.1| 503|Caenorhabditis elegans Hypothetical p... 39 0.003
AL117203-9|CAB60420.3| 675|Caenorhabditis elegans Hypothetical ... 33 0.20
AL032631-7|CAB63337.2| 855|Caenorhabditis elegans Hypothetical ... 32 0.35
AC024214-12|AAF36072.2| 370|Caenorhabditis elegans Hypothetical... 31 0.82
Z29560-12|CAL22705.1| 395|Caenorhabditis elegans Hypothetical p... 30 1.1
U00048-15|AAB53835.2| 597|Caenorhabditis elegans Lethal protein... 29 1.9
AF016446-7|AAC24174.1| 330|Caenorhabditis elegans Serpentine re... 29 1.9
U88314-9|AAF99881.1| 408|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z66512-1|CAA91322.1| 638|Caenorhabditis elegans Hypothetical pr... 28 4.4
U41555-9|AAB37034.1| 646|Caenorhabditis elegans Hypothetical pr... 28 4.4
D30651-1|BAA21637.1| 646|Caenorhabditis elegans flavoprotein su... 28 4.4
AF043693-6|AAB97539.1| 640|Caenorhabditis elegans Hypothetical ... 28 4.4
Z70038-6|CAA93882.3| 1323|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z49889-5|CAA90070.1| 2207|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z49868-5|CAA90032.1| 2207|Caenorhabditis elegans Hypothetical pr... 27 7.6
X57767-1|CAA40919.1| 1323|Caenorhabditis elegans tyrosine kinase... 27 7.6
D63426-1|BAA09729.1| 1374|Caenorhabditis elegans receptor tyrosi... 27 7.6
>Z82277-3|CAB05249.2| 495|Caenorhabditis elegans Hypothetical
protein LLC1.3 protein.
Length = 495
Score = 122 bits (294), Expect = 2e-28
Identities = 67/119 (56%), Positives = 79/119 (66%), Gaps = 2/119 (1%)
Frame = +2
Query: 242 KGPYLGGTCLNVGCIPSKALLHNSHLYHMAKHDFKQRGIETGEVTFDFKKMMEYKANAVK 421
K LGGTCLNVGCIPSKALL+NSH HMA+HDF RGI+ + + KMME K+N+VK
Sbjct: 60 KNATLGGTCLNVGCIPSKALLNNSHYLHMAQHDFAARGIDC-TASLNLPKMMEAKSNSVK 118
Query: 422 GLTGGIAMLFQKNKVNLVKGVGTIVAPN--KLKYTERRVLRLLIPKIF*FASGSEVTPF 592
LTGGI LF+ NKV V+G TIV PN + K + V + I ASGSEVTPF
Sbjct: 119 QLTGGIKQLFKANKVGHVEGFATIVGPNTVQAKKNDGSVETINARNIL-IASGSEVTPF 176
Score = 72.1 bits (169), Expect = 3e-13
Identities = 34/53 (64%), Positives = 38/53 (71%)
Frame = +3
Query: 96 FRSGSLVRIATRQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEKDPT 254
F ++ R Y+ T DADLVVIG GPGGYVAAIKAAQLGMK V VEK+ T
Sbjct: 11 FAKRQFFQVLARNYSNTQDADLVVIGGGPGGYVAAIKAAQLGMKTVCVEKNAT 63
>U61947-1|AAB03136.3| 667|Caenorhabditis elegans Thioredoxin
reductase protein 1 protein.
Length = 667
Score = 52.0 bits (119), Expect = 3e-07
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Frame = +2
Query: 254 LGGTCLNVGCIPSKALLHNSHLYHMAKHDFKQRG--IETGEVTFDFKKMMEYKANAVKGL 427
LGGTC+NVGCIP K L+H + L + HD K+ G + G+V + + + + + L
Sbjct: 215 LGGTCVNVGCIPKK-LMHQASLLGHSIHDAKKYGWKLPEGKVEHQWNHLRDSVQDHIASL 273
Query: 428 TGGIAMLFQKNKVNLVKGVGTIVAPNKLKYTERR 529
G + ++ V + G P ++ T ++
Sbjct: 274 NWGYRVQLREKTVTYINSYGEFTGPFEISATNKK 307
Score = 37.5 bits (83), Expect = 0.007
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +3
Query: 129 RQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVE 242
+++ H DL+VIG G GG AA +A++LG KV ++
Sbjct: 165 KEWLRDHTYDLIVIGGGSGGLAAAKEASRLGKKVACLD 202
>AF162693-1|AAD46625.1| 525|Caenorhabditis elegans thioredoxin
reductase homolog protein.
Length = 525
Score = 52.0 bits (119), Expect = 3e-07
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Frame = +2
Query: 254 LGGTCLNVGCIPSKALLHNSHLYHMAKHDFKQRG--IETGEVTFDFKKMMEYKANAVKGL 427
LGGTC+NVGCIP K L+H + L + HD K+ G + G+V + + + + + L
Sbjct: 73 LGGTCVNVGCIPKK-LMHQASLLGHSIHDAKKYGWKLPEGKVEHQWNHLRDSVQDHIASL 131
Query: 428 TGGIAMLFQKNKVNLVKGVGTIVAPNKLKYTERR 529
G + ++ V + G P ++ T ++
Sbjct: 132 NWGYRVQLREKTVTYINSYGEFTGPFEISATNKK 165
Score = 37.5 bits (83), Expect = 0.007
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +3
Query: 129 RQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVE 242
+++ H DL+VIG G GG AA +A++LG KV ++
Sbjct: 23 KEWLRDHTYDLIVIGGGSGGLAAAKEASRLGKKVACLD 60
>AF148217-1|AAD41826.1| 667|Caenorhabditis elegans thioredoxin
reductase protein.
Length = 667
Score = 52.0 bits (119), Expect = 3e-07
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Frame = +2
Query: 254 LGGTCLNVGCIPSKALLHNSHLYHMAKHDFKQRG--IETGEVTFDFKKMMEYKANAVKGL 427
LGGTC+NVGCIP K L+H + L + HD K+ G + G+V + + + + + L
Sbjct: 215 LGGTCVNVGCIPKK-LMHQASLLGHSIHDAKKYGWKLPEGKVEHQWNHLRDSVQDHIASL 273
Query: 428 TGGIAMLFQKNKVNLVKGVGTIVAPNKLKYTERR 529
G + ++ V + G P ++ T ++
Sbjct: 274 NWGYRVQLREKTVTYINSYGEFTGPFEISATNKK 307
Score = 37.5 bits (83), Expect = 0.007
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +3
Query: 129 RQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVE 242
+++ H DL+VIG G GG AA +A++LG KV ++
Sbjct: 165 KEWLRDHTYDLIVIGGGSGGLAAAKEASRLGKKVACLD 202
>Z81449-2|CAD88214.1| 459|Caenorhabditis elegans Hypothetical
protein C46F11.2b protein.
Length = 459
Score = 45.2 bits (102), Expect = 4e-05
Identities = 27/87 (31%), Positives = 43/87 (49%)
Frame = +2
Query: 230 GLSRKGPYLGGTCLNVGCIPSKALLHNSHLYHMAKHDFKQRGIETGEVTFDFKKMMEYKA 409
GL G LGGTC+NVGC+P K +++N L+ D G + FD+K + + +
Sbjct: 33 GLIESGR-LGGTCVNVGCVPKK-VMYNCSLHAEFIRDHADYGFDVTLNKFDWKVIKKSRD 90
Query: 410 NAVKGLTGGIAMLFQKNKVNLVKGVGT 490
+K L G + + V ++G T
Sbjct: 91 EYIKRLNGLYESGLKGSSVEYIRGRAT 117
>Z81449-1|CAB03763.1| 473|Caenorhabditis elegans Hypothetical
protein C46F11.2a protein.
Length = 473
Score = 45.2 bits (102), Expect = 4e-05
Identities = 27/87 (31%), Positives = 43/87 (49%)
Frame = +2
Query: 230 GLSRKGPYLGGTCLNVGCIPSKALLHNSHLYHMAKHDFKQRGIETGEVTFDFKKMMEYKA 409
GL G LGGTC+NVGC+P K +++N L+ D G + FD+K + + +
Sbjct: 47 GLIESGR-LGGTCVNVGCVPKK-VMYNCSLHAEFIRDHADYGFDVTLNKFDWKVIKKSRD 104
Query: 410 NAVKGLTGGIAMLFQKNKVNLVKGVGT 490
+K L G + + V ++G T
Sbjct: 105 EYIKRLNGLYESGLKGSSVEYIRGRAT 131
>Z11115-10|CAA77459.1| 503|Caenorhabditis elegans Hypothetical
protein ZK637.10 protein.
Length = 503
Score = 38.7 bits (86), Expect = 0.003
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
Frame = +2
Query: 254 LGGTCLNVGCIPSKALLHNSHLYHMAKHDFKQ--RGIETGEVTFDFKKMMEYKANAVKGL 427
+GGTC NVGCIP K + + + KH K GI+ ++ D+ + + + VK
Sbjct: 63 IGGTCANVGCIPKKLMHQAAIVGKELKHADKYGWNGIDQEKIKHDWNVLSKNVNDRVKAN 122
Query: 428 TGGIAMLFQKNKVNLVKGVGTIVAPNKLKYT 520
+ + K+N V +K+ T
Sbjct: 123 NWIYRVQLNQKKINYFNAYAEFVDKDKIVIT 153
Score = 32.7 bits (71), Expect = 0.20
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +3
Query: 129 RQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEK-DPT 254
R+ +++ DL+VIG+G GG + +AA LG V ++ +PT
Sbjct: 13 RRLFSSNKFDLIVIGAGSGGLSCSKRAADLGANVALIDAVEPT 55
>AL117203-9|CAB60420.3| 675|Caenorhabditis elegans Hypothetical
protein Y48C3A.12 protein.
Length = 675
Score = 32.7 bits (71), Expect = 0.20
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = -3
Query: 268 TSTS*VGSFSTETTFMPSWAALIAATYPPGPEPITTRSA 152
TSTS ST T +P+ A+ T PP P P T+ S+
Sbjct: 615 TSTSTTAYTSTPTASIPAATAITTTTAPPKPSPTTSESS 653
>AL032631-7|CAB63337.2| 855|Caenorhabditis elegans Hypothetical
protein Y106G6H.5 protein.
Length = 855
Score = 31.9 bits (69), Expect = 0.35
Identities = 19/41 (46%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 129 RQYATT-HDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEKD 248
R Y T +AD+VV G G G A A+ G KV VEKD
Sbjct: 13 RSYTTAVANADVVVCGGGISGTSIAYHLAKRGKKVALVEKD 53
>AC024214-12|AAF36072.2| 370|Caenorhabditis elegans Hypothetical
protein Y77E11A.2 protein.
Length = 370
Score = 30.7 bits (66), Expect = 0.82
Identities = 14/60 (23%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +3
Query: 78 KLASPTFRSGSLVRIATRQYATTH--DADLVVIGSGPGGYVAAIKAAQLGMKVVSVEKDP 251
++ S ++G ++ TR+ + +ADLV+ G G ++AA ++ + DP
Sbjct: 87 EIVSELGKAGISTKVVTREQLAQYLPEADLVISAGGDGTFLAAASVVNDNTPIIGINTDP 146
>Z29560-12|CAL22705.1| 395|Caenorhabditis elegans Hypothetical
protein K03H1.13 protein.
Length = 395
Score = 30.3 bits (65), Expect = 1.1
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Frame = +2
Query: 221 HEGGLSRKGPYLGGTCLNVGCIPS-KALLHNSHLYHMAKHDFKQRGIETGEVTFDFKKMM 397
H GGLS++ P+L G +P+ K++L + K+D ++ TG + ++
Sbjct: 78 HSGGLSQRMPHLSAYGKAFGTLPNCKSILETK--LEIYKNDLLEKLPSTGGIMITASDVI 135
Query: 398 EYKANAVKGLTGGIAMLFQKNKVNLVKGV--GTIVAPNKLKYTER 526
E NA K + + ++ +K +L G G V K + +R
Sbjct: 136 ENMENAEK-VKSNVDIIVFAHKSSLEVGTQHGVFVMDKKTRKLKR 179
>U00048-15|AAB53835.2| 597|Caenorhabditis elegans Lethal protein
721 protein.
Length = 597
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 156 DLVVIGSGPGGYVAAIKAAQLGMK 227
D+V++G GP G AAI+ QL K
Sbjct: 52 DVVIVGGGPSGLSAAIRLRQLAEK 75
>AF016446-7|AAC24174.1| 330|Caenorhabditis elegans Serpentine
receptor, class h protein21 protein.
Length = 330
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -1
Query: 423 PLTALALYSIIFLKSNV 373
P+ LALYS+IF+KSNV
Sbjct: 24 PIYCLALYSLIFIKSNV 40
>U88314-9|AAF99881.1| 408|Caenorhabditis elegans Hypothetical
protein C46H11.2 protein.
Length = 408
Score = 28.7 bits (61), Expect = 3.3
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +3
Query: 150 DADLVVIGSGPGGYVAAIKAAQLGMKVVSVEKDPT 254
D +++VIG+GP G +++ ++ K+ + K T
Sbjct: 170 DKEVIVIGAGPSGIDISLQLSETAKKITLISKKAT 204
>Z66512-1|CAA91322.1| 638|Caenorhabditis elegans Hypothetical
protein F52H3.2 protein.
Length = 638
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 117 RIATRQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEKD 248
R+ R + T D D++VIG G G +A AA+ G V V ++
Sbjct: 7 RLLRRCFQT--DVDVIVIGGGHAGCESAAAAARCGSNTVLVTQN 48
>U41555-9|AAB37034.1| 646|Caenorhabditis elegans Hypothetical
protein C03G5.1 protein.
Length = 646
Score = 28.3 bits (60), Expect = 4.4
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +2
Query: 323 HMAKHDFKQRGIETGEVTFDFKKMME 400
H KH + IETGEV+ D++ +++
Sbjct: 603 HWRKHSIIRSNIETGEVSLDYRPVID 628
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 147 HDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEK 245
H D VV+G+G G AA+ A+ G+K + K
Sbjct: 41 HAYDAVVVGAGGAGLRAAMGLAEGGLKTAVITK 73
>D30651-1|BAA21637.1| 646|Caenorhabditis elegans flavoprotein
subunit of complex II protein.
Length = 646
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 147 HDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEK 245
H D VV+G+G G AA+ A+ G+K + K
Sbjct: 41 HAYDAVVVGAGGAGLRAAMGLAEEGLKTAVITK 73
Score = 28.3 bits (60), Expect = 4.4
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +2
Query: 323 HMAKHDFKQRGIETGEVTFDFKKMME 400
H KH + IETGEV+ D++ +++
Sbjct: 603 HWRKHSIIRSNIETGEVSLDYRPVID 628
>AF043693-6|AAB97539.1| 640|Caenorhabditis elegans Hypothetical
protein C34B2.7 protein.
Length = 640
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 147 HDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEK 245
H D VV+G+G G AA+ ++ GMK + K
Sbjct: 34 HTFDAVVVGAGGAGLRAAMGLSEGGMKTAVITK 66
>Z70038-6|CAA93882.3| 1323|Caenorhabditis elegans Hypothetical
protein ZK1067.1 protein.
Length = 1323
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 472 CQRCRNYSCPK*IEVHGEKGVETV 543
C++CR+ SCPK V G ET+
Sbjct: 356 CEKCRSSSCPKICTVDGHLTNETL 379
>Z49889-5|CAA90070.1| 2207|Caenorhabditis elegans Hypothetical protein
W07E11.1 protein.
Length = 2207
Score = 27.5 bits (58), Expect = 7.6
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 159 LVVIGSGPGGYVAAIKAAQLGMKVVSVEK 245
+ +IGSGP G AA + ++G VV E+
Sbjct: 1849 IAIIGSGPSGLGAAAQLVKVGHTVVVYER 1877
>Z49868-5|CAA90032.1| 2207|Caenorhabditis elegans Hypothetical protein
W07E11.1 protein.
Length = 2207
Score = 27.5 bits (58), Expect = 7.6
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 159 LVVIGSGPGGYVAAIKAAQLGMKVVSVEK 245
+ +IGSGP G AA + ++G VV E+
Sbjct: 1849 IAIIGSGPSGLGAAAQLVKVGHTVVVYER 1877
>X57767-1|CAA40919.1| 1323|Caenorhabditis elegans tyrosine kinase
protein.
Length = 1323
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 472 CQRCRNYSCPK*IEVHGEKGVETV 543
C++CR+ SCPK V G ET+
Sbjct: 356 CEKCRSSSCPKICTVDGHLTNETL 379
>D63426-1|BAA09729.1| 1374|Caenorhabditis elegans receptor tyrosine
kinase protein.
Length = 1374
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 472 CQRCRNYSCPK*IEVHGEKGVETV 543
C++CR+ SCPK V G ET+
Sbjct: 407 CEKCRSSSCPKICTVDGHLTNETL 430
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,926,916
Number of Sequences: 27780
Number of extensions: 299981
Number of successful extensions: 771
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 768
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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