Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0041
(803 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26293| Best HMM Match : WD40 (HMM E-Value=1.1e-15) 44 1e-04
SB_20681| Best HMM Match : WD40 (HMM E-Value=3.1e-16) 35 0.089
SB_52725| Best HMM Match : WD40 (HMM E-Value=2.1e-22) 31 0.83
SB_21573| Best HMM Match : WD40 (HMM E-Value=4.1e-32) 31 0.83
SB_55962| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.83
SB_47540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.83
SB_57808| Best HMM Match : WD40 (HMM E-Value=2.5e-22) 30 1.9
SB_52576| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_14111| Best HMM Match : WD40 (HMM E-Value=6.2e-30) 30 1.9
SB_37321| Best HMM Match : Pkinase (HMM E-Value=2.4e-27) 30 1.9
SB_48808| Best HMM Match : DEAD (HMM E-Value=0.029) 30 2.5
SB_11879| Best HMM Match : WD40 (HMM E-Value=5.8e-21) 30 2.5
SB_20382| Best HMM Match : WD40 (HMM E-Value=1.7e-23) 29 3.3
SB_54131| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_22072| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_22042| Best HMM Match : WD40 (HMM E-Value=6.1e-13) 29 3.3
SB_19258| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_54574| Best HMM Match : WD40 (HMM E-Value=0) 29 4.4
SB_37875| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_36508| Best HMM Match : WD40 (HMM E-Value=0.006) 29 5.8
SB_34582| Best HMM Match : PAP2 (HMM E-Value=0.013) 29 5.8
SB_14684| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_49401| Best HMM Match : WD40 (HMM E-Value=1.6e-22) 28 7.7
SB_30961| Best HMM Match : I-set (HMM E-Value=0) 28 7.7
SB_20916| Best HMM Match : zf-C3HC4 (HMM E-Value=0.013) 28 7.7
SB_16092| Best HMM Match : FixQ (HMM E-Value=2.5) 28 7.7
>SB_26293| Best HMM Match : WD40 (HMM E-Value=1.1e-15)
Length = 140
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Frame = +2
Query: 272 IYKKEGNDWKQTNNLVEHDLRVMGIDWAPN----TNRIVTCSVDRNAYVWTQG-DDGKWA 436
++++ G W + L H V + WAPN T+ I +CS D +W++ ++G+
Sbjct: 20 MFRETGGQWVEEQKLEAHSDWVRDVAWAPNVGLPTSTIASCSQDCRVIIWSRNEEEGEGW 79
Query: 437 TTLVLLRINRAATCVKWSPMEN 502
++ VL + N V WS N
Sbjct: 80 SSKVLKKFNDVVWHVSWSVTGN 101
>SB_20681| Best HMM Match : WD40 (HMM E-Value=3.1e-16)
Length = 91
Score = 34.7 bits (76), Expect = 0.089
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 320 EHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATT 442
+H + + + + R+ TCS D++ VW G+DG+W T
Sbjct: 10 DHKDLIHDVSYDFHGRRMATCSSDQSVKVWDLGEDGEWRCT 50
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +2
Query: 284 EGNDWKQTNNLVEHDLRVMGIDWA-PNTNRIV-TCSVDRNAYVWTQ 415
E +W+ T N H V + WA P +++ +CS DR VW +
Sbjct: 43 EDGEWRCTANWKTHSGSVWKVTWAHPEFGQVLASCSFDRTVAVWEE 88
>SB_52725| Best HMM Match : WD40 (HMM E-Value=2.1e-22)
Length = 874
Score = 31.5 bits (68), Expect = 0.83
Identities = 12/50 (24%), Positives = 26/50 (52%)
Frame = +2
Query: 260 NEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVW 409
N + +Y ++ NL H+ +V + W+ + ++I++C +D Y W
Sbjct: 254 NVIQLYSS--TTFENVGNLKGHNGKVRQVIWSQDDSKIISCGMDGAVYEW 301
>SB_21573| Best HMM Match : WD40 (HMM E-Value=4.1e-32)
Length = 458
Score = 31.5 bits (68), Expect = 0.83
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +1
Query: 496 GEQVSVGSGARLISICYFEKENNWWVSKHIKKPIRSTVTSIDWHPNN-ILLVAGSADFKV 672
G +++ GS R S+ +K+ HI K +V + WHP+N L V S D +
Sbjct: 45 GRRLASGSFDRTASVFVLDKDR--LTLDHIYKGHNESVDQLCWHPSNPDLFVTASGDKTI 102
Query: 673 RVF 681
R++
Sbjct: 103 RIW 105
>SB_55962| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 31.5 bits (68), Expect = 0.83
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = +1
Query: 496 GEQVSVGSGARLISICYFEKENNWWVSKHIKKPIRSTVTSIDWHPNNILLVAGSADFKVR 675
G+ V +GS RL + + W SK + P T+TS+ W + LVAG+ V
Sbjct: 168 GQSVVIGSFDRLRVFNWSPRRGAWDESKAKEIPNLYTITSLAWKRDGSRLVAGTLCGGVE 227
Query: 676 VF 681
+F
Sbjct: 228 LF 229
>SB_47540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 622
Score = 31.5 bits (68), Expect = 0.83
Identities = 18/79 (22%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +2
Query: 296 WKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATTLVLLRINRA-A 472
W+ + L +H V+ + W+P+ + + + SVD +W + K+ + +++ +
Sbjct: 78 WRCVHTLRQHSGDVLDLAWSPDDSFLASGSVDNTVTIW---NAQKFPEVIQIIKGHTGLV 134
Query: 473 TCVKWSPMENKFLSGQELD 529
V W P+ K+L+ Q D
Sbjct: 135 KGVTWDPV-GKYLASQSDD 152
>SB_57808| Best HMM Match : WD40 (HMM E-Value=2.5e-22)
Length = 195
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 607 VTSIDWHPNNILLVAGSAD 663
V IDWHP+ LLV+GS D
Sbjct: 158 VKCIDWHPHKSLLVSGSKD 176
>SB_52576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1649
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/72 (30%), Positives = 31/72 (43%)
Frame = +2
Query: 308 NNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKW 487
N+L HD V GI + R+V+ S DR +W +A L + CV
Sbjct: 826 NSLDGHDGHVRGIAITSDGRRLVSASQDRTLRIWNL---ETFAHVSTLRGHSETVYCVCC 882
Query: 488 SPMENKFLSGQE 523
SP + +SG E
Sbjct: 883 SPDDKFAISGSE 894
>SB_14111| Best HMM Match : WD40 (HMM E-Value=6.2e-30)
Length = 1093
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +2
Query: 323 HDLRVMGIDWAP-NTNRIVTCSVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPME 499
H V +DW P TN + +CS+D + VW +G + A VKWSP
Sbjct: 203 HTSGVNRLDWNPVYTNLLASCSMDNSVRVWDTYLNGICVKSHTF--HGGAVKDVKWSPGG 260
Query: 500 NKFLS 514
+ LS
Sbjct: 261 MQLLS 265
>SB_37321| Best HMM Match : Pkinase (HMM E-Value=2.4e-27)
Length = 592
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/79 (27%), Positives = 35/79 (44%)
Frame = -2
Query: 538 LISI*LLTRQKLVLHGRPFHASRCSVDTQKNKSSCPFPIISLSPDVSITVNRTRNNTVGV 359
LI I ++ + L+ G P + + CP+ S SP V+ T RTR+ T+
Sbjct: 371 LIMIMVIDSRYLLFPGLPECHHSPATTNMRRAIMCPYAP-STSPRVTSTTFRTRHRTLSA 429
Query: 358 GSPINPHHSKVVFHKVVCL 302
+ S V H++ CL
Sbjct: 430 RFFSDVPESHVYVHRISCL 448
>SB_48808| Best HMM Match : DEAD (HMM E-Value=0.029)
Length = 498
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -2
Query: 511 QKLVLHGRPFHASRCSVDTQKNKSSCPFPIISLSPDVSI 395
Q LHG H + V T SCPF I+ ++P++ +
Sbjct: 293 QAASLHGDMSHTQKQGVYTAIRDPSCPFKILYVTPEILV 331
>SB_11879| Best HMM Match : WD40 (HMM E-Value=5.8e-21)
Length = 447
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +2
Query: 236 SNCILTXNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQ 415
++C T + + N WKQ +L H L V I ++ + RI++ S DR+ V+
Sbjct: 219 TSCKATKPEHACVILWDANIWKQVCSLPGHSLTVTQIAFSHSGQRILSVSRDRSWAVFRL 278
Query: 416 GDD 424
D
Sbjct: 279 RQD 281
>SB_20382| Best HMM Match : WD40 (HMM E-Value=1.7e-23)
Length = 437
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 311 NLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVW 409
+L H L VM +D + ++ IVT S D+N +W
Sbjct: 241 SLYGHKLPVMAMDISSDSTLIVTGSADKNIKIW 273
>SB_54131| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3160
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +2
Query: 248 LTXNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRI 373
L NNEV + K D +NN VE+D + ID + N +
Sbjct: 1607 LVSNNEVELAKSTNIDKLVSNNEVEYDAKSTNIDKLVSNNEV 1648
Score = 29.5 bits (63), Expect = 3.3
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
Frame = +2
Query: 248 LTXNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRI-VTCSVDRNAYVWTQGDD 424
L NNEV + K D +NN E+D + ID + N + + S + + V G +
Sbjct: 1659 LVSNNEVELAKSTNIDKLVSNNEDEYDAKSTNIDKLVSNNEVELAKSTNIDKLVSNNGVE 1718
Query: 425 GKWATTLVLLRINRAATCVKWSPMENKFLSGQELD 529
+T + L N K S NK +S E++
Sbjct: 1719 LAKSTNIDKLVSNNEVELAK-STNINKLVSNNEVE 1752
Score = 29.5 bits (63), Expect = 3.3
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
Frame = +2
Query: 248 LTXNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRI-VTCSVDRNAYVWTQGDD 424
L NNEV + K D +NN E+D + ID + N + + S + + V G +
Sbjct: 1762 LVSNNEVELAKSTNIDKLVSNNEDEYDAKSTNIDKLVSNNEVELAKSTNIDKLVSNNGVE 1821
Query: 425 GKWATTLVLLRINRAATCVKWSPMENKFLSGQELD 529
+T + L N K S NK +S E++
Sbjct: 1822 LAKSTNIDKLVSNNEVELAK-STNINKLVSNNEVE 1855
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +2
Query: 320 EHDLRVMGIDWAPNT--NRIVTCSVDRNAYVWTQGDDG 427
EHD V + W+ N + +CS DR +W + G
Sbjct: 3103 EHDGPVWQVSWSHPMFGNLLASCSYDRKVIIWKESSSG 3140
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +2
Query: 248 LTXNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRI 373
L NNEV + K D +NN VE+D + ID + N +
Sbjct: 1487 LVSNNEVVLAKSTNIDKLVSNNEVEYDAKSTNIDKLVSNNEV 1528
>SB_22072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 642
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = +2
Query: 248 LTXNNE-VHIYKKEGND---WKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVW 409
LT ++E HI E ++ W + L H V + W+P+ ++++ SVD +A +W
Sbjct: 150 LTCSSEHQHILDDENDNLETWTVSKMLRGHIEDVYDLAWSPDGTQLLSGSVDNSAIIW 207
>SB_22042| Best HMM Match : WD40 (HMM E-Value=6.1e-13)
Length = 232
Score = 29.5 bits (63), Expect = 3.3
Identities = 20/82 (24%), Positives = 33/82 (40%)
Frame = +2
Query: 245 ILTXNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDD 424
++T +N++ +Y E D + H ++ +D + +IVT S D VW D
Sbjct: 152 VVTNSNQLRLYNLETLDCRMVEG---HSKMILCLDVCADGTKIVTGSKDHTVRVWDVSDC 208
Query: 425 GKWATTLVLLRINRAATCVKWS 490
V A + V WS
Sbjct: 209 SNPRCLAVGNGHTHAVSGVAWS 230
>SB_19258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 459
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/47 (27%), Positives = 19/47 (40%)
Frame = +2
Query: 284 EGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDD 424
+ N W H + +DW N N +CS D+ +V G D
Sbjct: 215 DANTWDVKQQFAFHQAPTLDVDW-QNNNSFASCSTDKLIHVCRLGLD 260
>SB_54574| Best HMM Match : WD40 (HMM E-Value=0)
Length = 1050
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 317 VEHDLRVMGIDWAPNTNRIVTCSVDRNAYVW 409
V H V ++P+ + V+CS DR VW
Sbjct: 591 VGHTQEVFSCSFSPDDTKAVSCSADRTVKVW 621
>SB_37875| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 544
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/27 (44%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +1
Query: 604 TVTSIDWHPNN-ILLVAGSADFKVRVF 681
T+T+I WHP++ L AG +D ++RV+
Sbjct: 295 TITAIAWHPSSRYLASAGGSDRQIRVW 321
Score = 28.3 bits (60), Expect = 7.7
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = +2
Query: 278 KKEGNDWKQTNNL---VEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGDDGKWATTLV 448
KK+G T V H ++ I A N I++CS D +W G+ TL
Sbjct: 180 KKDGTGTTITGEFDFPVRHKAEIINIAVASNGKYIMSCSKDTTIIIWDL--KGEVLATLD 237
Query: 449 LLRINRA 469
L+IN +
Sbjct: 238 TLQINNS 244
>SB_36508| Best HMM Match : WD40 (HMM E-Value=0.006)
Length = 1103
Score = 28.7 bits (61), Expect = 5.8
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = +2
Query: 317 VEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTQGD 421
V+ ++ +M I W+ +T+RI+T + +W+ G+
Sbjct: 545 VKGNVAIMSIQWSKDTSRILTLNSQGTVELWSVGN 579
>SB_34582| Best HMM Match : PAP2 (HMM E-Value=0.013)
Length = 279
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = -2
Query: 331 KVVFHK-VVCLLPVISFLLVYVNFIIXGEN 245
KV F + ++ LP ISFLL+Y N+ I E+
Sbjct: 16 KVPFKQMIIAFLPFISFLLIYSNYRIIRES 45
>SB_14684| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = -2
Query: 331 KVVFHK-VVCLLPVISFLLVYVNFIIXGEN 245
KV F + ++ LP ISFLL+Y N+ I E+
Sbjct: 60 KVPFKQMIIAFLPFISFLLIYSNYRIIRES 89
>SB_49401| Best HMM Match : WD40 (HMM E-Value=1.6e-22)
Length = 453
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/30 (40%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = +1
Query: 598 RSTVTSIDWHPNN-ILLVAGSADFKVRVFS 684
R T+T+I W+P+N +L + AD +V ++S
Sbjct: 61 RKTITAIAWNPHNEDILASAGADCRVLIWS 90
>SB_30961| Best HMM Match : I-set (HMM E-Value=0)
Length = 1018
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = -2
Query: 424 IISLSPDVSITVNRTRNNTV 365
I ++SPDVS+T+NRT + T+
Sbjct: 671 ITAISPDVSVTINRTDSVTL 690
>SB_20916| Best HMM Match : zf-C3HC4 (HMM E-Value=0.013)
Length = 507
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/61 (24%), Positives = 31/61 (50%)
Frame = -2
Query: 487 PFHASRCSVDTQKNKSSCPFPIISLSPDVSITVNRTRNNTVGVGSPINPHHSKVVFHKVV 308
P + S+ ++ + ++C F + L+ + +RT + + G PINPH ++ +V
Sbjct: 428 PPYISQSTLLGRNGSNACTFISLILAHSYITSASRT-SIQLSRGPPINPHWLSMMLSAIV 486
Query: 307 C 305
C
Sbjct: 487 C 487
>SB_16092| Best HMM Match : FixQ (HMM E-Value=2.5)
Length = 250
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +2
Query: 647 SLALLTSKYESSLAYIKDIEDQPGPNVWGL*VAFRTTV 760
+LA T +L I+ IE++ GP++W + VAF+ V
Sbjct: 200 ALACWTFYQGRTLEDIRQIEEELGPDLWPIVVAFKDIV 237
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,768,719
Number of Sequences: 59808
Number of extensions: 564946
Number of successful extensions: 1428
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1420
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2227723674
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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