Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0038
         (791 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    25   0.69 
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    25   0.69 
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    25   0.69 
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    25   0.69 
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    25   0.69 
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           25   0.69 
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    25   0.69 
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   8.5  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    21   8.5  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   8.5  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   8.5  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   8.5  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   8.5  

>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 25.0 bits (52), Expect = 0.69
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +1

Query: 157 MDKSRLRQSTVHSNEIGERQRSQRTGYE 240
           M +  L QSTV++N   +RQR+  T Y+
Sbjct: 204 MKRVHLGQSTVNANGETKRQRTSYTRYQ 231


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 25.0 bits (52), Expect = 0.69
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +1

Query: 157 MDKSRLRQSTVHSNEIGERQRSQRTGYE 240
           M +  L QSTV++N   +RQR+  T Y+
Sbjct: 204 MKRVHLGQSTVNANGETKRQRTSYTRYQ 231


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 25.0 bits (52), Expect = 0.69
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +1

Query: 157 MDKSRLRQSTVHSNEIGERQRSQRTGYE 240
           M +  L QSTV++N   +RQR+  T Y+
Sbjct: 204 MKRVHLGQSTVNANGETKRQRTSYTRYQ 231


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 25.0 bits (52), Expect = 0.69
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +1

Query: 157 MDKSRLRQSTVHSNEIGERQRSQRTGYE 240
           M +  L QSTV++N   +RQR+  T Y+
Sbjct: 204 MKRVHLGQSTVNANGETKRQRTSYTRYQ 231


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 25.0 bits (52), Expect = 0.69
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +1

Query: 157 MDKSRLRQSTVHSNEIGERQRSQRTGYE 240
           M +  L QSTV++N   +RQR+  T Y+
Sbjct: 160 MKRVHLGQSTVNANGETKRQRTSYTRYQ 187


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 25.0 bits (52), Expect = 0.69
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +1

Query: 157 MDKSRLRQSTVHSNEIGERQRSQRTGYE 240
           M +  L QSTV++N   +RQR+  T Y+
Sbjct: 204 MKRVHLGQSTVNANGETKRQRTSYTRYQ 231


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 25.0 bits (52), Expect = 0.69
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +1

Query: 157 MDKSRLRQSTVHSNEIGERQRSQRTGYE 240
           M +  L QSTV++N   +RQR+  T Y+
Sbjct: 204 MKRVHLGQSTVNANGETKRQRTSYTRYQ 231


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +1

Query: 148 SDCMDKSRLRQSTVHSNEIGERQRSQ 225
           SDC       Q+  H+NE+  R + +
Sbjct: 27  SDCDKNQNTEQNYTHNNEMYHRVKEE 52


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +1

Query: 157 MDKSRLRQSTVHSNEIGERQRSQ 225
           M +  L QSTV++N   +RQR++
Sbjct: 204 MKRVHLGQSTVNANGETKRQRTR 226


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +1

Query: 148 SDCMDKSRLRQSTVHSNEIGERQRSQ 225
           SDC       Q+  H+NE+  R + +
Sbjct: 27  SDCDKNQNTEQNYTHNNEMYHRVKEE 52


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -2

Query: 478 LNHIFLISKLFSKLP 434
           +N + LISK+F+ LP
Sbjct: 7   INSLVLISKIFALLP 21


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 11/24 (45%), Positives = 13/24 (54%), Gaps = 3/24 (12%)
 Frame = +1

Query: 469 YD*VLVPFL---WNLYCKPI*YYD 531
           YD  L+  L   WN Y  PI YY+
Sbjct: 332 YDNALLALLDDYWNEYIPPILYYN 355


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 11/24 (45%), Positives = 13/24 (54%), Gaps = 3/24 (12%)
 Frame = +1

Query: 469 YD*VLVPFL---WNLYCKPI*YYD 531
           YD  L+  L   WN Y  PI YY+
Sbjct: 332 YDNALLALLDDYWNEYIPPILYYN 355


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,643
Number of Sequences: 336
Number of extensions: 3938
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21480183
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)