Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0037
         (809 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    93   7e-21
Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein ...    87   5e-19
EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            49   2e-07
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    25   3.7  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    25   3.7  
AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant r...    24   6.4  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    23   8.4  

>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 93.5 bits (222), Expect = 7e-21
 Identities = 41/62 (66%), Positives = 47/62 (75%)
 Frame = +2

Query: 71  KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 250
           K V+VGDG  GKTC+LI ++ D FP  YVPT F+NY A + VDG QV L LWDTAGQEDY
Sbjct: 8   KCVVVGDGTVGKTCMLISYTTDSFPGEYVPTSFDNYSAPMVVDGVQVSLGLWDTAGQEDY 67

Query: 251 DR 256
           DR
Sbjct: 68  DR 69



 Score = 87.4 bits (207), Expect = 5e-19
 Identities = 39/78 (50%), Positives = 51/78 (65%)
 Frame = +1

Query: 280 TDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPATINELRKMKQ 459
           TDV L+C+SV SP S EN+  KW PE+KH CP+ PIILVG K DLR D  TI+ L     
Sbjct: 78  TDVFLICYSVASPSSFENVTSKWYPEIKHHCPDAPIILVGTKIDLREDRETISLLADQGL 137

Query: 460 EPVKPQEGRAMAEKINGL 513
             +K ++G+ +A KI  +
Sbjct: 138 SALKREQGQKLANKIRAV 155



 Score = 27.1 bits (57), Expect = 0.68
 Identities = 9/19 (47%), Positives = 16/19 (84%)
 Frame = +3

Query: 516 YLECSAKSKEGVREVFETA 572
           Y+ECSA ++ G+++VF+ A
Sbjct: 157 YMECSALTQRGLKQVFDEA 175


>Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein
           protein.
          Length = 134

 Score = 87.4 bits (207), Expect = 5e-19
 Identities = 35/78 (44%), Positives = 54/78 (69%)
 Frame = +1

Query: 280 TDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPATINELRKMKQ 459
           TDV L+CFSV SP S EN+ EKW PE+ H C   P +LVG + DLR++ +T+ +L K KQ
Sbjct: 18  TDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQIDLRDENSTLEKLAKNKQ 77

Query: 460 EPVKPQEGRAMAEKINGL 513
           +P+  ++G  +A+++  +
Sbjct: 78  KPITLEQGEKLAKELKAV 95



 Score = 34.7 bits (76), Expect = 0.003
 Identities = 16/38 (42%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
 Frame = +3

Query: 516 YLECSAKSKEGVREVFETATRAALQ-VKKKKKTRCSLL 626
           Y+ECSA +++G++ VF+ A  AAL+  +  KK +C  L
Sbjct: 97  YVECSALTQKGLKNVFDVAILAALEPPEPTKKRKCRFL 134


>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 48.8 bits (111), Expect = 2e-07
 Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
 Frame = +2

Query: 71  KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD-IEVDGKQVELALWDTAGQED 247
           KLV++G+ A GK+ L++ F K QF E    T+   ++   + +D   V+  +WDTAGQE 
Sbjct: 26  KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAGQER 85

Query: 248 Y 250
           Y
Sbjct: 86  Y 86



 Score = 28.7 bits (61), Expect = 0.22
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +1

Query: 292 LMCFSVDSPDSLENIPEKWTPEV-KHFCPNVPIILVGNKKDLRN 420
           ++ + + + DS     + W  E+ +   PN+ I L GNK DL N
Sbjct: 101 IVVYDIQNSDSFARA-KTWVKELQRQASPNIVIALAGNKADLAN 143


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = -2

Query: 346 TSLGCSRANP-ASPPRST*GSHPYLDTRAAAAIVI 245
           T   CS A+   SPPRS  GSH  ++      I+I
Sbjct: 287 TQTDCSEASSDGSPPRSPEGSHEEVEMDEPKKILI 321


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = -2

Query: 346 TSLGCSRANP-ASPPRST*GSHPYLDTRAAAAIVI 245
           T   CS A+   SPPRS  GSH  ++      I+I
Sbjct: 287 TQTDCSEASSDGSPPRSPEGSHEEVEMDEPKKILI 321


>AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant
           receptor Or4 protein.
          Length = 397

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 12/36 (33%), Positives = 15/36 (41%)
 Frame = -2

Query: 613 LVFFFFLTCNAALVAVSNTSRTPSLLLAEHSRYANR 506
           +V FF  T    L  +  T       L EH+ YA R
Sbjct: 301 VVMFFLATAETFLYCLLGTRLATQQQLLEHALYATR 336


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.4 bits (48), Expect = 8.4
 Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 4/36 (11%)
 Frame = +3

Query: 543  EGVREVFETATRAALQVK----KKKKTRCSLL*VCC 638
            +   E FE A + A + K    K K  RC+L   CC
Sbjct: 1039 QSTNEEFEAARKKAKKAKAAFEKVKNERCTLFTNCC 1074


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 885,952
Number of Sequences: 2352
Number of extensions: 18077
Number of successful extensions: 48
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85655418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)