Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0037
         (809 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    26   0.47 
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    24   1.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   3.3  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   5.8  

>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 25.8 bits (54), Expect = 0.47
 Identities = 16/54 (29%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
 Frame = +2

Query: 572 NQSRIT-GQEEEED*VFSAVSVLLFGKTLIL*MVRILPDNLRLKRLGLYSIRGV 730
           +Q+ +T G+E++ +  FS +SVLL G   ++ +   +  N+ L  + +Y+ RG+
Sbjct: 4   SQNNLTDGKEDQPENTFSLLSVLLVGFLFLILIFLSVAGNI-LVCVAIYTDRGL 56


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +3

Query: 657 FYEWFAYCLITYV*NDSDSTAFAASPTP 740
           F     YCL+  V  DSD+    A P P
Sbjct: 319 FMALMEYCLVNIVLGDSDTPPKPAPPPP 346


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = +1

Query: 391  LVGNKKDLRNDPATINELRKMKQEPVKPQEGRAMAE 498
            +V +++ +  DP+     R    +P   Q+G+A A+
Sbjct: 978  VVQSQQPIMTDPSPFKRGRYTPPQPANAQQGQAQAQ 1013


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +1

Query: 112 SADSVQQGSIPG-SIRADSV*ELRCRHRSGWKTSG 213
           +A S   G  P  +I ADS  EL  R R G+K +G
Sbjct: 168 TAASTVLGFFPALNIVADSFIELIRRQRVGYKVTG 202


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 228,554
Number of Sequences: 438
Number of extensions: 4311
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)