Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0036
         (668 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    23   2.3  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   4.0  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   5.2  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   6.9  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   6.9  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   9.1  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +1

Query: 493 RSQNQKLIKYILADDSQHTGLVINERILNIPAAISVPI 606
           + +NQK +KY++ D  + T L     + + PA    P+
Sbjct: 47  KCENQKCVKYLVED--EETSLATCNMLCSEPAIWPKPV 82


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -3

Query: 480 DSFVSNSLICATLGSFFLLV 421
           D ++   L+C  LG F L++
Sbjct: 100 DQYLLEQLVCEQLGGFLLIL 119


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 247 SSCLIPWKSLSSGLRPSKS 191
           S C+  W+S  S LRP  S
Sbjct: 225 SICIEIWQSSESSLRPRSS 243


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 97  VCVNFLVLFIRHFSKINKR 41
           V   FL LF+ H+  IN++
Sbjct: 228 VISTFLQLFLEHYEVINRQ 246


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 97  VCVNFLVLFIRHFSKINKR 41
           V   FL LF+ H+  IN++
Sbjct: 154 VISTFLQLFLEHYEVINRQ 172


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = -1

Query: 665 VGIAYFSYELSQVQSVVMQIMGTLIAAGMFSILSLI 558
           +GIA  SY+ S V    + I+ T+    +F IL+++
Sbjct: 20  LGIAPISYKNSNVNYSKIGIVQTVAYFVIFIILTIV 55


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,999
Number of Sequences: 336
Number of extensions: 2299
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)