Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0033
         (690 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_03_0178 + 13127669-13127741,13127831-13128173,13128308-131283...    30   2.0  
03_02_0277 + 7056341-7056391,7056681-7056764,7057107-7057223,705...    29   2.6  
11_01_0671 - 5479240-5479286,5480399-5480588,5480669-5480824,548...    28   8.0  
06_03_1162 + 28093749-28093851,28093939-28093997,28094691-280947...    28   8.0  
03_06_0661 - 35369687-35369749,35369842-35370040,35370149-353706...    28   8.0  

>09_03_0178 +
           13127669-13127741,13127831-13128173,13128308-13128376,
           13129706-13129844,13130010-13130021
          Length = 211

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
 Frame = -2

Query: 266 RSERLVEVLIGEVHVRIRVYFSPDANYQDDQSRNGKQEIEAKHEVLYTGHSTFEGHC--Y 93
           R ERL     G V VR+R Y+ P+ +    +  +G +E+            T EG C  +
Sbjct: 44  RVERLETDGRGSVRVRVRWYYRPEESKGGRRQFHGAKELFLSDHFDTQSAHTIEGKCVVH 103

Query: 92  SIKYYRQI 69
           S K Y ++
Sbjct: 104 SFKNYTKL 111


>03_02_0277 +
           7056341-7056391,7056681-7056764,7057107-7057223,
           7057335-7057772,7057889-7058295,7058371-7058470,
           7058707-7058793,7059056-7059544
          Length = 590

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +1

Query: 469 YSISGRQERPEDYYIIQTDLQCCGINSPADW 561
           Y ISG++  PE   +I+  + CC ++SP  W
Sbjct: 402 YLISGQRVNPE---LIEYHILCCRVHSPTQW 429


>11_01_0671 -
           5479240-5479286,5480399-5480588,5480669-5480824,
           5481005-5481931
          Length = 439

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = -1

Query: 651 GRVLGAGRDDAVIDLLGGAARARYGQTVIGPVGRTVYTAALQVC 520
           G V  AG D A   LLGG + A+  + + GP  R ++ + L+ C
Sbjct: 277 GMVDNAGNDSAKCVLLGGLSEAKKLELIAGPEMR-IFRSDLRWC 319


>06_03_1162 +
           28093749-28093851,28093939-28093997,28094691-28094766,
           28094848-28094919,28095023-28095110,28095230-28095485,
           28095583-28095698,28096064-28096127,28096252-28096354,
           28096446-28096554,28097048-28097234
          Length = 410

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = +2

Query: 50  FYSVVIQFGGNI*LNNNGPRRWNVLCKVPHVLLQSPVCHYGIDH 181
           F+S+  Q+ G +     GP  W+ L K P  ++        +DH
Sbjct: 6   FWSIYYQYEGAVNEGQRGPTIWDTLTKRPGRVIDFSNADVAVDH 49


>03_06_0661 -
           35369687-35369749,35369842-35370040,35370149-35370641,
           35372982-35373126
          Length = 299

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -1

Query: 576 QTVIGPVGRTVYTAALQVCLYDIIVF 499
           + VIG +GR  Y A+L VC  ++I F
Sbjct: 248 EKVIGILGRGAYQASLAVCTENLITF 273


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,262,287
Number of Sequences: 37544
Number of extensions: 391325
Number of successful extensions: 960
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 960
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1756684372
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)