Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0032
         (467 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    23   1.6  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    23   2.2  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    22   3.8  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   5.0  
DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.              21   6.6  
AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex det...    21   6.6  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   8.7  

>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +2

Query: 365 LKQVGCTHILATTATGSLV 421
           LKQV   H +ATT  G LV
Sbjct: 170 LKQVEIPHDVATTGKGELV 188


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +2

Query: 278 RVQCVLLARHGRKHQLQPSDVNYRANI 358
           R+ CV+ +RH      +  +V  R N+
Sbjct: 220 RISCVIASRHRNLEATESENVRPRRNV 246


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = -2

Query: 391 DVSAADLLKCPNISSIVHIARLKLMFSAVSCQQNALDPFDLTLY 260
           D++ + LLK   I   + +     M   VS    A+DP + T+Y
Sbjct: 162 DLNTSKLLKQIEIPHNIAVNASTGMGGPVSLVVQAMDPMNTTVY 205


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 419 VEEYRPGDLVILDD 460
           +EEY PG+ VI+ D
Sbjct: 416 IEEYLPGNGVIIPD 429


>DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.
          Length = 150

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/40 (22%), Positives = 20/40 (50%)
 Frame = +2

Query: 152 NKDRNYRRFGLR*SDAFRESNRKGGGHTVWXTLGLLIEGQ 271
           N++ N+R +G   +  ++++    G       +  +IEGQ
Sbjct: 60  NEEENFRNYGCFLACIWQQTGVMNGSELSTYNIAGIIEGQ 99


>AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +2

Query: 125 FRRYGRCKKNKDRNYRR 175
           + R  RC ++++R YR+
Sbjct: 231 YSRERRCSRDRNREYRK 247


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -2

Query: 358 NISSIVHIARLKLMFSAVSCQQNALDPFDLTL 263
           N+S+ V IAR K M +A +    +L   DL L
Sbjct: 71  NVSTCVVIARNKSMHTATNYYLFSLAVSDLLL 102


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,143
Number of Sequences: 438
Number of extensions: 2292
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12559158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)