Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0031
         (821 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL023828-5|CAA19450.1|  260|Caenorhabditis elegans Hypothetical ...    62   6e-10
Z81039-3|CAB02775.1|  325|Caenorhabditis elegans Hypothetical pr...    31   1.3  
AF125459-12|AAD12832.1|  533|Caenorhabditis elegans Hypothetical...    28   9.3  

>AL023828-5|CAA19450.1|  260|Caenorhabditis elegans Hypothetical
           protein Y17G7B.3 protein.
          Length = 260

 Score = 61.7 bits (143), Expect = 6e-10
 Identities = 35/91 (38%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
 Frame = +2

Query: 509 ALTKKVEHNTKFKIGNLNVQCLFTPCHTTGHICYFVTAPEEGNDS--VVFTGGYTLLRRM 682
           A+ + V+H    +   L ++CL TPCHT+GHICY +T P   + S  VVFTG  TL    
Sbjct: 86  AMDRHVKHGDMAEFAGLQIKCLSTPCHTSGHICYHITNPAADSTSPGVVFTGD-TLFIAG 144

Query: 683 WAGSLKGTADQMYKALTILSSCLTTLNVLWP 775
                +GTA QM  AL  +   L     ++P
Sbjct: 145 CGRFFEGTAPQMDVALNEILKNLPVETQIFP 175



 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 46/185 (24%), Positives = 77/185 (41%), Gaps = 4/185 (2%)
 Frame = +3

Query: 267 VKILPALQDNYMYLIVDKATKEAAI-VDPVEPKTVLKAVEEQGVNLXXXXXXXXXXXXAG 443
           VK L    DN+MY++   +   AA+ VD V  +   +  +++ +++             G
Sbjct: 4   VKSLLRRADNFMYIVKKSSEARAALLVDLVNEEDYKELADKENIDITAVLTTHHHYDHCG 63

Query: 444 GNEDLIKERPGLIVYGGDDRIGPSQKKLSTIQSLKSVT*MYSVFLHPVIQLG--IYVIS* 617
           GNE   ++ P +++ GGD RI    + +      +           P    G   Y I+ 
Sbjct: 64  GNEGFRRQFPNVMILGGDSRIPAMDRHVKHGDMAEFAGLQIKCLSTPCHTSGHICYHITN 123

Query: 618 LLQKKVTIQLSSPGDTLFLGGCGQVL-*RARQIKCTKH*QF*AAA*PH*MFCGHEYTLAG 794
                 +  +   GDTLF+ GCG+     A Q+    +           +F GHEYT+A 
Sbjct: 124 PAADSTSPGVVFTGDTLFIAGCGRFFEGTAPQMDVALNEILKNLPVETQIFPGHEYTVAN 183

Query: 795 IXKFA 809
           + KFA
Sbjct: 184 L-KFA 187


>Z81039-3|CAB02775.1|  325|Caenorhabditis elegans Hypothetical
           protein C25D7.4 protein.
          Length = 325

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = +2

Query: 521 KVEHNTKFKIGNLNVQCLFTPCHTTGHICYFVTAPEEGNDSVVFTGGYTL 670
           K+E++ +F      V  LF P +T G++ YF      GN  ++F   Y L
Sbjct: 268 KIEYSMQFVAHRFEVARLFQPSNTNGNLDYFAYKCSGGN-YIIFLDDYHL 316


>AF125459-12|AAD12832.1|  533|Caenorhabditis elegans Hypothetical
           protein Y25C1A.4 protein.
          Length = 533

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 21/62 (33%), Positives = 25/62 (40%)
 Frame = -2

Query: 418 VVRTVVKFTPCSSTAFKTVLGSTGSTIAASFVALSTIKYM*LSWSAGRIFTSMFFTGGPL 239
           V  T V  T   ST   T  G + ST AA     ST      S +A    T+    GGP 
Sbjct: 40  VTTTTVASTSSGSTTASTAAGGSTSTTAAGGSTASTAAGGSTSTTAAGGSTASTAAGGPT 99

Query: 238 GN 233
           G+
Sbjct: 100 GS 101


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,926,780
Number of Sequences: 27780
Number of extensions: 364159
Number of successful extensions: 885
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 883
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2029935014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)