Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0026
(614 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0945 - 7439776-7440026,7440109-7440269,7440824-7441011 83 2e-16
03_06_0257 - 32697469-32697520,32698183-32698301,32698536-326985... 80 2e-15
08_02_0127 + 12840738-12840913,12841475-12841635,12842123-128422... 70 2e-12
03_01_0459 + 3533718-3533916,3535009-3535150,3535290-3535410,353... 50 1e-06
06_01_0688 - 5022703-5022805,5023615-5023694,5024305-5024381,502... 43 2e-04
03_06_0347 + 33293915-33294104,33295143-33295284,33295365-332954... 43 2e-04
10_01_0303 - 3337454-3337544,3338358-3338521,3338624-3338805,333... 39 0.003
07_01_0680 + 5128023-5128212,5128629-5128667,5129496-5129637,512... 34 0.078
06_01_0521 - 3773749-3773931,3774295-3774485,3775115-3775334 33 0.18
02_05_1125 + 34282559-34282796,34283247-34283437,34283540-342836... 30 1.3
04_03_1008 + 21691299-21691413,21691524-21691863,21692344-216924... 29 2.2
11_03_0132 - 10505910-10505996,10507419-10507499,10509582-105105... 28 6.8
05_01_0214 - 1615519-1616775 28 6.8
06_03_0099 + 16633928-16638213,16638299-16638386,16638823-166389... 27 8.9
01_06_1457 + 37508187-37508421,37509012-37509109,37509791-375099... 27 8.9
>01_01_0945 - 7439776-7440026,7440109-7440269,7440824-7441011
Length = 199
Score = 82.6 bits (195), Expect = 2e-16
Identities = 40/85 (47%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Frame = +2
Query: 5 DGLPLAATMQEDEQSACNILEYQNQAKMLFRKLSP--QSPMRCSIETGPYLFHYLIENHI 178
D LPL + +D + + Y+ QAK+LF+ LS R SIETGPYLFHY+IE +
Sbjct: 12 DDLPLVEGL-DDGRDLKDADFYKQQAKLLFKNLSKGQHEASRMSIETGPYLFHYIIEGRV 70
Query: 179 CYLVLCERNYSKRLAFNYLEEIAQE 253
CYL +C+ +Y K+LAF YLE++ E
Sbjct: 71 CYLTMCDCSYPKKLAFQYLEDLKNE 95
Score = 30.7 bits (66), Expect = 0.96
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 268 GHRLNTVTRPYTFIEFDTCMQ 330
G+++ T RPY FI+FDT +Q
Sbjct: 101 GNQIETAARPYAFIKFDTFIQ 121
>03_06_0257 -
32697469-32697520,32698183-32698301,32698536-32698556,
32698903-32698979,32699331-32699477,32699561-32699721,
32700320-32700522
Length = 259
Score = 79.8 bits (188), Expect = 2e-15
Identities = 58/188 (30%), Positives = 87/188 (46%), Gaps = 7/188 (3%)
Frame = +2
Query: 5 DGLPLAATMQEDEQSACNILEYQNQAKMLFRKLSP--QSPMRCSIETGPYLFHY-----L 163
DGLPLA + +D + + Y+ QAK+LF+ LS R SIETGPY F Y +
Sbjct: 12 DGLPLAEGL-DDGRDQKDADFYKQQAKLLFKNLSKGQHEASRMSIETGPYFFQYPYVLYI 70
Query: 164 IENHICYLVLCERNYSKRLAFNYLEEIAQESSNSTDTG*TP*LVXXXXXXXXXXXXXXGK 343
IE +CYL +C+R+Y K+LAF YLE++ E + K
Sbjct: 71 IEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGSQIETAARPYAFIKFDTFIQKTKK 130
Query: 344 QYAEXXXXXXXXXXXSHLAPQLGDVQRIMMQNIDDVLQRGAILSELDTKTQNLFDMSQKY 523
Y + + L +L +V +IM +N+ +VL G L ++ + L ++ Y
Sbjct: 131 LYLD----TRTQRNLAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVTEMSTRLTSDTRMY 186
Query: 524 RKDATYLN 547
A LN
Sbjct: 187 ADKAKDLN 194
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 268 GHRLNTVTRPYTFIEFDTCMQ 330
G ++ T RPY FI+FDT +Q
Sbjct: 106 GSQIETAARPYAFIKFDTFIQ 126
>08_02_0127 +
12840738-12840913,12841475-12841635,12842123-12842202,
12842435-12842550,12842570-12842705,12842738-12842872
Length = 267
Score = 69.7 bits (163), Expect = 2e-12
Identities = 37/85 (43%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Frame = +2
Query: 5 DGLPLAATMQEDEQSACNILEYQNQAKMLFRKLSP--QSPMRCSIETGPYLFHYLIENHI 178
DGLPL + +D + + Y+ QAK+LF+ LS R SIETGPY+ IE +
Sbjct: 12 DGLPLVEGL-DDGRDLKDADFYKQQAKLLFKNLSKGQHEASRMSIETGPYI----IEGRV 66
Query: 179 CYLVLCERNYSKRLAFNYLEEIAQE 253
CYL +C+ +Y K+LAF YLE++ E
Sbjct: 67 CYLTMCDHSYPKKLAFQYLEDLKNE 91
>03_01_0459 +
3533718-3533916,3535009-3535150,3535290-3535410,
3535513-3535575,3535677-3535823
Length = 223
Score = 50.4 bits (115), Expect = 1e-06
Identities = 41/185 (22%), Positives = 80/185 (43%), Gaps = 5/185 (2%)
Frame = +2
Query: 68 YQNQAKMLFRKLSPQSPMRCSIETGPYLFHYLIENHICYLVLCERNYSKRLAFNYLEEIA 247
+ + A +KL P + R S + F+Y + + Y V+ + ++L ++E +
Sbjct: 31 FASVAAQCLQKL-PSTNNRHSYNCDGHTFNYHVHDGFTYCVVATESAGRQLPVGFIERVK 89
Query: 248 QESSNSTDTG*TP*LVXXXXXXXXXXXXXXGKQYAEXXXXXXXXXXXSHLAPQLGDVQRI 427
++ S G +Y + + + Q+ +V+ +
Sbjct: 90 EDFSKKYSGGKAKNATANSLKREYGPKLKEHMKYCDAHPEEIDKL--AKVKAQVTEVKGV 147
Query: 428 MMQNIDDVLQRGAILSELDTKTQNLFDMSQKYRKDATYLNTK----SMLVK-VTAGAVIV 592
MMQNI+ VL RG + L KT++L +Q +RK T + K +M +K + G V+
Sbjct: 148 MMQNIEKVLDRGEKIELLVDKTEDLRSQAQDFRKAGTKIRRKMWWENMKMKLIVFGIVVA 207
Query: 593 LVIVL 607
L++V+
Sbjct: 208 LILVI 212
>06_01_0688 -
5022703-5022805,5023615-5023694,5024305-5024381,
5024670-5024816,5025654-5025876
Length = 209
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/54 (46%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Frame = +2
Query: 5 DGLPLAATMQEDEQSACNILEYQNQAKMLFRKLSP--QSPMRCSIETGPYLFHY 160
DGLPLA + +D + + Y+ QAK+LF+ LS R SIETGPY F Y
Sbjct: 12 DGLPLAEGL-DDGRDQKDADFYKQQAKLLFKNLSKGQHEASRMSIETGPYYFQY 64
>03_06_0347 +
33293915-33294104,33295143-33295284,33295365-33295485,
33295590-33295652,33296524-33296553,33297411-33297905
Length = 346
Score = 43.2 bits (97), Expect = 2e-04
Identities = 30/144 (20%), Positives = 59/144 (40%)
Frame = +2
Query: 107 PQSPMRCSIETGPYLFHYLIENHICYLVLCERNYSKRLAFNYLEEIAQESSNSTDTG*TP 286
P S + + + F+YL+E+ Y V+ + +++ +L+ + + + G
Sbjct: 40 PASNNKFTYNCDGHTFNYLVEDGFTYCVVAVESVGRQIPIAFLDRVKDDFTKRYAGGKAA 99
Query: 287 *LVXXXXXXXXXXXXXXGKQYAEXXXXXXXXXXXSHLAPQLGDVQRIMMQNIDDVLQRGA 466
QY + + Q+ +V+ +MM+NI+ VL RG
Sbjct: 100 TAAANSLNRDFGSKLKEHMQYC--VDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGE 157
Query: 467 ILSELDTKTQNLFDMSQKYRKDAT 538
+ L KT+NL +Q +R+ T
Sbjct: 158 KIELLVDKTENLRSQAQDFRQAGT 181
>10_01_0303 -
3337454-3337544,3338358-3338521,3338624-3338805,
3339088-3339322
Length = 223
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/66 (31%), Positives = 34/66 (51%)
Frame = +2
Query: 410 GDVQRIMMQNIDDVLQRGAILSELDTKTQNLFDMSQKYRKDATYLNTKSMLVKVTAGAVI 589
G++ +M+ NI+ +L RG +S L KT + D + +RK + L + AV+
Sbjct: 138 GEIHTVMVDNIEKILDRGERISLLVDKTSTMQDSAFHFRKQSRRLRRALWMKNAKLLAVL 197
Query: 590 VLVIVL 607
VIVL
Sbjct: 198 TAVIVL 203
>07_01_0680 +
5128023-5128212,5128629-5128667,5129496-5129637,
5129727-5129847,5129951-5130013,5130114-5130203,
5130572-5130619,5131114-5131260
Length = 279
Score = 34.3 bits (75), Expect = 0.078
Identities = 21/70 (30%), Positives = 39/70 (55%)
Frame = +2
Query: 404 QLGDVQRIMMQNIDDVLQRGAILSELDTKTQNLFDMSQKYRKDATYLNTKSMLVKVTAGA 583
Q+ +V+ +MM+NI+ VL RG + L KT+NL SQ ++ + +L+ V+
Sbjct: 150 QVSEVKGVMMENIEKVLDRGEKIELLVDKTENL--RSQNSGIFIQWIAMEKLLIHVSVDR 207
Query: 584 VIVLVIVLYF 613
+ V +V+ +
Sbjct: 208 MRVWSMVMKY 217
>06_01_0521 - 3773749-3773931,3774295-3774485,3775115-3775334
Length = 197
Score = 33.1 bits (72), Expect = 0.18
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2
Query: 404 QLGDVQRIMMQNIDDVLQRGAILSELDTKTQNLFDMSQKYRKDA 535
++ V+ +M+ NID VL+RG L L KT N+ + ++++ A
Sbjct: 134 EISQVRTVMIDNIDKVLERGDRLDMLVDKTANMQGNTIRFKRQA 177
>02_05_1125 +
34282559-34282796,34283247-34283437,34283540-34283629,
34283630-34283793,34284139-34284352
Length = 298
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 416 VQRIMMQNIDDVLQRGAILSELDTKTQNLFDMSQKYRKDA 535
V+ +M+ NID VL+RG L L KT + + ++++ A
Sbjct: 174 VRNVMIDNIDKVLERGDRLELLVDKTATMQGNTMRFKRQA 213
>04_03_1008 +
21691299-21691413,21691524-21691863,21692344-21692425,
21692905-21693060,21694171-21694344,21694485-21694556,
21695289-21695360,21695473-21695591,21695692-21695777,
21695867-21695919,21696058-21696150
Length = 453
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -1
Query: 305 NVYGRVTVFNLCPYCWKIPVLFPRDN*MLVVYCSFFHT 192
N +G+V V + +C+ + V FP D + V C + HT
Sbjct: 312 NKFGQVGVGDTDDHCFPVQVKFPEDQKVAQVACGWRHT 349
>11_03_0132 -
10505910-10505996,10507419-10507499,10509582-10510528,
10510645-10510742,10511273-10511442,10511551-10511832,
10514544-10514936
Length = 685
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = -3
Query: 579 PAVTFTSIDFVLRYVASFRYFCDISNRFCVFVSSSDSIAPLCSTSSMFCIMM 424
P T T + V RY++S R+ + C F ++ + A L S+S + M
Sbjct: 435 PCETTTPLQGVQRYISSVRFLAGCDSPACGFAATGQA-AALASSSDQVIMFM 485
>05_01_0214 - 1615519-1616775
Length = 418
Score = 27.9 bits (59), Expect = 6.8
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2
Query: 604 HNHEHDNGSGGHLHQH 557
H+H+HD+G H H H
Sbjct: 196 HSHDHDHGGSDHDHHH 211
>06_03_0099 +
16633928-16638213,16638299-16638386,16638823-16638950,
16640008-16640278
Length = 1590
Score = 27.5 bits (58), Expect = 8.9
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -2
Query: 604 HNHEHDNGSGGHLHQHRL 551
H+H H +G GG HQ L
Sbjct: 28 HHHHHHHGDGGDCHQQEL 45
>01_06_1457 +
37508187-37508421,37509012-37509109,37509791-37509904,
37510361-37510426,37510659-37510745,37510902-37511012
Length = 236
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +2
Query: 407 LGDVQRIMMQNIDDVLQRGAILSELDTKTQNLFDMSQK 520
L + + I+ + I+ VLQRG L L K+ +L SQK
Sbjct: 164 LDETKIILHKTIESVLQRGERLDSLVEKSSDLSAASQK 201
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,959,196
Number of Sequences: 37544
Number of extensions: 256389
Number of successful extensions: 843
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 834
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1478421500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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