Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0026
(614 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U67949-6|AAB07559.2| 214|Caenorhabditis elegans Hypothetical pr... 128 4e-30
U80027-7|AAC48119.2| 312|Caenorhabditis elegans Serpentine rece... 30 1.5
U41014-3|AAK32948.1| 519|Caenorhabditis elegans Hypothetical pr... 29 3.5
U39742-5|AAK39199.1| 767|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z93373-2|CAN99669.1| 1671|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z93373-1|CAB07551.1| 1601|Caenorhabditis elegans Hypothetical pr... 27 8.1
U80436-7|AAC71109.1| 1638|Caenorhabditis elegans Uncoordinated p... 27 8.1
U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated p... 27 8.1
U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated p... 27 8.1
AF048835-1|AAC12932.1| 1638|Caenorhabditis elegans guanine nucle... 27 8.1
AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucle... 27 8.1
AF016451-7|AAB66003.2| 312|Caenorhabditis elegans Serpentine re... 27 8.1
>U67949-6|AAB07559.2| 214|Caenorhabditis elegans Hypothetical
protein F55A4.1 protein.
Length = 214
Score = 128 bits (308), Expect = 4e-30
Identities = 76/207 (36%), Positives = 117/207 (56%), Gaps = 4/207 (1%)
Frame = +2
Query: 5 DGLPLAATMQ--EDEQSACNILEYQNQAKMLFRKLSPQSPMRCSIETGPYLFHYLIENHI 178
DGL LA +++ D ++++Y NQAKMLF+KL+ +P + S+E+GP++FHY+I +I
Sbjct: 11 DGLILATSIEGNNDGSGDSSMVKYSNQAKMLFKKLNG-APAQQSVESGPFVFHYIIVQNI 69
Query: 179 CYLVLCERNYSKRLAFNYLEEIAQESSNSTDTG*TP*LVXXXXXXXXXXXXXXGKQYAEX 358
C LVLC+RN+ +++AF YL +I QE N + + Q A+
Sbjct: 70 CALVLCDRNFPRKVAFQYLSDIGQEFLNENSS-----RIEQVVRPYHFLEFDKYIQQAKQ 124
Query: 359 XXXXXXXXXXSHLAPQLGDVQRIMMQNIDDVLQRGAILSELDTKTQNLFDMSQKYRKDAT 538
+ ++ +L DV RIM+ NI+DV+ RG L+ L+ + L MS+KYR DA
Sbjct: 125 RYGDTNKHAMNTVSNELQDVTRIMVTNIEDVIHRGEALNILENRASELSGMSKKYRDDAK 184
Query: 539 YLNTKSMLVKVTA--GAVIVLVIVLYF 613
LN +S + KV A G VL ++L F
Sbjct: 185 ALNRRSTIFKVAASIGIAGVLFLMLRF 211
>U80027-7|AAC48119.2| 312|Caenorhabditis elegans Serpentine
receptor, class t protein63 protein.
Length = 312
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -3
Query: 519 FCDISNRFCVFVSSSDSIAPLCSTSSMFCI-MMRCTSPS 406
+CD+S FC F++ I P+ S + F + ++ CT+ S
Sbjct: 61 YCDVSQSFCHFLTGIFLIFPIISEKAQFFVRIVGCTANS 99
>U41014-3|AAK32948.1| 519|Caenorhabditis elegans Hypothetical
protein C06G1.1 protein.
Length = 519
Score = 28.7 bits (61), Expect = 3.5
Identities = 23/57 (40%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 136 NRPVSLPLFD*K--SHMLFGPV*KKLQ*TTSIQLSRGNSTGIFQQYGHRLNTVTRPY 300
N P+S LF+ ++ L GPV Q T RGNS GI +Q RLN PY
Sbjct: 218 NTPLSASLFEQYFINYALLGPVEFSSQAITLKH--RGNSFGILRQGRTRLNDFRLPY 272
>U39742-5|AAK39199.1| 767|Caenorhabditis elegans Hypothetical
protein C25F6.4 protein.
Length = 767
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -2
Query: 205 VSFTQDQITYVIFNQIMEEIRAGFNGTSHR 116
V F+QD T+ +F+QI R N TS R
Sbjct: 287 VIFSQDGKTFPLFSQISSSERQSLNNTSRR 316
>Z93373-2|CAN99669.1| 1671|Caenorhabditis elegans Hypothetical
protein C01B9.1b protein.
Length = 1671
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +2
Query: 134 ETGP--YLFHYLIENHICYLVLCERNYSKRLAFNYLEE 241
ETG Y FH + ENH + LC R Y+ + + E
Sbjct: 267 ETGEDIYKFHVMDENHDISINLCMREYANLHSITFTRE 304
>Z93373-1|CAB07551.1| 1601|Caenorhabditis elegans Hypothetical
protein C01B9.1a protein.
Length = 1601
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +2
Query: 134 ETGP--YLFHYLIENHICYLVLCERNYSKRLAFNYLEE 241
ETG Y FH + ENH + LC R Y+ + + E
Sbjct: 197 ETGEDIYKFHVMDENHDISINLCMREYANLHSITFTRE 234
>U80436-7|AAC71109.1| 1638|Caenorhabditis elegans Uncoordinated
protein 73, isoform b protein.
Length = 1638
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +2
Query: 410 GDVQRIMMQNIDDVLQRGAILSELDTKTQNLFDMSQKYRKDATYLNTKSMLVK 568
G+VQ++ Q DV + G+ + ++DT + D+S K K N++ +L++
Sbjct: 551 GNVQKLH-QVYQDVTKSGSKICDVDTMHGLMTDLSAKIEKFTKIENSRELLLR 602
>U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated
protein 73, isoform f protein.
Length = 2140
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +2
Query: 410 GDVQRIMMQNIDDVLQRGAILSELDTKTQNLFDMSQKYRKDATYLNTKSMLVK 568
G+VQ++ Q DV + G+ + ++DT + D+S K K N++ +L++
Sbjct: 551 GNVQKLH-QVYQDVTKSGSKICDVDTMHGLMTDLSAKIEKFTKIENSRELLLR 602
>U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated
protein 73, isoform a protein.
Length = 2488
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +2
Query: 410 GDVQRIMMQNIDDVLQRGAILSELDTKTQNLFDMSQKYRKDATYLNTKSMLVK 568
G+VQ++ Q DV + G+ + ++DT + D+S K K N++ +L++
Sbjct: 551 GNVQKLH-QVYQDVTKSGSKICDVDTMHGLMTDLSAKIEKFTKIENSRELLLR 602
>AF048835-1|AAC12932.1| 1638|Caenorhabditis elegans guanine
nucleotide exchange factorUNC-73B protein.
Length = 1638
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +2
Query: 410 GDVQRIMMQNIDDVLQRGAILSELDTKTQNLFDMSQKYRKDATYLNTKSMLVK 568
G+VQ++ Q DV + G+ + ++DT + D+S K K N++ +L++
Sbjct: 551 GNVQKLH-QVYQDVTKSGSKICDVDTMHGLMTDLSAKIEKFTKIENSRELLLR 602
>AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine
nucleotide exchange factorUNC-73A protein.
Length = 2488
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +2
Query: 410 GDVQRIMMQNIDDVLQRGAILSELDTKTQNLFDMSQKYRKDATYLNTKSMLVK 568
G+VQ++ Q DV + G+ + ++DT + D+S K K N++ +L++
Sbjct: 551 GNVQKLH-QVYQDVTKSGSKICDVDTMHGLMTDLSAKIEKFTKIENSRELLLR 602
>AF016451-7|AAB66003.2| 312|Caenorhabditis elegans Serpentine
receptor, class t protein64 protein.
Length = 312
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/37 (29%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -3
Query: 519 FCDISNRFCVFVSSSDSIAPLCSTSSMFCI-MMRCTS 412
+CD+S FC F++ I P+ + + F + ++ CT+
Sbjct: 61 YCDVSQSFCHFLTGIFLIFPVVAEKAQFFVRIIGCTA 97
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,855,099
Number of Sequences: 27780
Number of extensions: 221854
Number of successful extensions: 706
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 699
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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