Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0025
         (658 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    24   0.96 
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   6.7  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   6.7  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    21   6.7  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   8.9  

>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 24.2 bits (50), Expect = 0.96
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 212 RGRSESDGTGGPCH 253
           RG + +DG GGP H
Sbjct: 291 RGAARADGAGGPLH 304


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -2

Query: 279 TVAVGTVRTWQGPPVPSD 226
           T A   V  WQ  P+PSD
Sbjct: 58  TSAAADVDGWQVTPLPSD 75


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/23 (39%), Positives = 13/23 (56%), Gaps = 2/23 (8%)
 Frame = -3

Query: 128 CEESSKCGDKHHGPVPAG--CSR 66
           C++   C D  +G VP G  C+R
Sbjct: 150 CQKHPLCNDDPNGNVPLGKSCNR 172


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 11/28 (39%), Positives = 12/28 (42%)
 Frame = -3

Query: 143 LVKSSCEESSKCGDKHHGPVPAGCSRSH 60
           L K S EE     +K H P  A   R H
Sbjct: 253 LQKMSVEEMYLAAEKSHDPFIASLVRPH 280


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 251 HVRTVPTATVFYPSDAVSTERAVEL 325
           +++T P  T F     VST+R  EL
Sbjct: 442 NLKTTPDNTTFITLVDVSTKRRTEL 466


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,486
Number of Sequences: 336
Number of extensions: 3025
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)