Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0024
         (718 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0150 + 1256029-1256137,1256206-1256247,1256345-1256455,125...    28   6.4  

>11_01_0150 +
           1256029-1256137,1256206-1256247,1256345-1256455,
           1256538-1256600,1256678-1256910,1256999-1257223,
           1257319-1257411,1257493-1257591,1257840-1257956
          Length = 363

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = +2

Query: 437 EEQRXXXSSWRVQTYRIVIRPANTTWQMIRELPESPSKSKGDWM 568
           E  +    +WR   +R  ++PA T  Q I+  P+    S   W+
Sbjct: 207 EHAKSLWINWRGDLHRHFVKPAKTMQQAIKNKPKDFDPSDWQWL 250


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,506,644
Number of Sequences: 37544
Number of extensions: 290814
Number of successful extensions: 566
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 566
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)