Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0016
         (715 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY121654-1|AAM51981.1|  333|Drosophila melanogaster RE02181p pro...   161   9e-40
AE013599-3158|AAF46696.3|  333|Drosophila melanogaster CG9480-PB...   161   9e-40

>AY121654-1|AAM51981.1|  333|Drosophila melanogaster RE02181p
           protein.
          Length = 333

 Score =  161 bits (391), Expect = 9e-40
 Identities = 70/84 (83%), Positives = 78/84 (92%)
 Frame = +1

Query: 256 DVLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELS 435
           +VLDS+DAA+LALL RPELG+TFTK+HCW L Q+EKCVFLDAD LV+QNCDELFEREELS
Sbjct: 62  NVLDSQDAANLALLSRPELGVTFTKLHCWRLVQFEKCVFLDADTLVLQNCDELFEREELS 121

Query: 436 AAPDVGWPDCFNSGVFVFKPSNET 507
           AAPDV WPDCFNSGVFVFKPS +T
Sbjct: 122 AAPDVSWPDCFNSGVFVFKPSVDT 145



 Score = 78.2 bits (184), Expect = 1e-14
 Identities = 36/58 (62%), Positives = 45/58 (77%)
 Frame = +2

Query: 74  MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEV 247
           MS  AWVTL TND+Y LGALVLAHSL+RA + +    L+TP VS+AMRDRL+ V++ V
Sbjct: 1   MSKFAWVTLTTNDTYSLGALVLAHSLKRAKTAHQLAVLVTPNVSQAMRDRLKEVYNVV 58



 Score = 68.1 bits (159), Expect = 1e-11
 Identities = 28/37 (75%), Positives = 31/37 (83%)
 Frame = +2

Query: 539 GSFDGGDQGLLNSFFSDWAHGDINKHLPFLYNVTTAA 649
           GSFDGGDQGLLN FF+DW+  DI KHLPF+YNVT  A
Sbjct: 157 GSFDGGDQGLLNQFFADWSTADIKKHLPFVYNVTAYA 193


>AE013599-3158|AAF46696.3|  333|Drosophila melanogaster CG9480-PB,
           isoform B protein.
          Length = 333

 Score =  161 bits (391), Expect = 9e-40
 Identities = 70/84 (83%), Positives = 78/84 (92%)
 Frame = +1

Query: 256 DVLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELS 435
           +VLDS+DAA+LALL RPELG+TFTK+HCW L Q+EKCVFLDAD LV+QNCDELFEREELS
Sbjct: 62  NVLDSQDAANLALLSRPELGVTFTKLHCWRLVQFEKCVFLDADTLVLQNCDELFEREELS 121

Query: 436 AAPDVGWPDCFNSGVFVFKPSNET 507
           AAPDV WPDCFNSGVFVFKPS +T
Sbjct: 122 AAPDVSWPDCFNSGVFVFKPSVDT 145



 Score = 78.2 bits (184), Expect = 1e-14
 Identities = 36/58 (62%), Positives = 45/58 (77%)
 Frame = +2

Query: 74  MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEV 247
           MS  AWVTL TND+Y LGALVLAHSL+RA + +    L+TP VS+AMRDRL+ V++ V
Sbjct: 1   MSKFAWVTLTTNDTYSLGALVLAHSLKRAKTAHQLAVLVTPNVSQAMRDRLKEVYNVV 58



 Score = 68.1 bits (159), Expect = 1e-11
 Identities = 28/37 (75%), Positives = 31/37 (83%)
 Frame = +2

Query: 539 GSFDGGDQGLLNSFFSDWAHGDINKHLPFLYNVTTAA 649
           GSFDGGDQGLLN FF+DW+  DI KHLPF+YNVT  A
Sbjct: 157 GSFDGGDQGLLNQFFADWSTADIKKHLPFVYNVTAYA 193


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,430,333
Number of Sequences: 53049
Number of extensions: 613852
Number of successful extensions: 1697
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1697
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3170136354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)