Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0016
(715 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64599-6|AAL11464.1| 284|Caenorhabditis elegans Unidentified vi... 136 1e-32
U64599-5|AAM69110.1| 303|Caenorhabditis elegans Unidentified vi... 136 1e-32
U64599-4|AAB04562.1| 429|Caenorhabditis elegans Unidentified vi... 136 1e-32
Z82052-1|CAB04823.1| 300|Caenorhabditis elegans Hypothetical pr... 128 4e-30
AL132862-24|CAB60560.1| 173|Caenorhabditis elegans Hypothetical... 80 2e-15
AF038621-1|AAB94141.4| 89|Caenorhabditis elegans Hypothetical ... 50 1e-06
Z72514-9|CAA96680.3| 449|Caenorhabditis elegans Hypothetical pr... 47 2e-05
Z68001-3|CAO78709.1| 449|Caenorhabditis elegans Hypothetical pr... 47 2e-05
>U64599-6|AAL11464.1| 284|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 5, isoform b
protein.
Length = 284
Score = 136 bits (329), Expect = 1e-32
Identities = 57/86 (66%), Positives = 71/86 (82%)
Frame = +1
Query: 256 DVLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELS 435
DV +S D+ +L L++RP+LG+TFTK+HCW LTQY KCVFLDAD LV++N DELF R + S
Sbjct: 61 DVFNSNDSDNLRLIERPDLGVTFTKLHCWRLTQYTKCVFLDADTLVLRNADELFTRPDFS 120
Query: 436 AAPDVGWPDCFNSGVFVFKPSNETSR 513
AA D+GWPD FNSGVFV+ P+NET R
Sbjct: 121 AASDIGWPDSFNSGVFVYVPNNETYR 146
Score = 56.8 bits (131), Expect = 1e-08
Identities = 28/56 (50%), Positives = 36/56 (64%)
Frame = +2
Query: 80 NRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEV 247
+ AW+TLATND+Y GALVL HSLR AG+ LI+ VS +R +L F +V
Sbjct: 2 SEAWITLATNDNYAQGALVLVHSLRTAGTTRKIHCLISNEVSAPVRKQLEEHFDDV 57
Score = 55.6 bits (128), Expect = 3e-08
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = +2
Query: 539 GSFDGGDQGLLNSFFSDWAHGDINKHLPFLYNVTTAAF 652
GS+DGGDQGLLN FFS+W LPF+YN+T AF
Sbjct: 156 GSYDGGDQGLLNDFFSNWRDLPSEHRLPFIYNMTAGAF 193
>U64599-5|AAM69110.1| 303|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 5, isoform c
protein.
Length = 303
Score = 136 bits (329), Expect = 1e-32
Identities = 57/86 (66%), Positives = 71/86 (82%)
Frame = +1
Query: 256 DVLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELS 435
DV +S D+ +L L++RP+LG+TFTK+HCW LTQY KCVFLDAD LV++N DELF R + S
Sbjct: 61 DVFNSNDSDNLRLIERPDLGVTFTKLHCWRLTQYTKCVFLDADTLVLRNADELFTRPDFS 120
Query: 436 AAPDVGWPDCFNSGVFVFKPSNETSR 513
AA D+GWPD FNSGVFV+ P+NET R
Sbjct: 121 AASDIGWPDSFNSGVFVYVPNNETYR 146
Score = 56.8 bits (131), Expect = 1e-08
Identities = 28/56 (50%), Positives = 36/56 (64%)
Frame = +2
Query: 80 NRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEV 247
+ AW+TLATND+Y GALVL HSLR AG+ LI+ VS +R +L F +V
Sbjct: 2 SEAWITLATNDNYAQGALVLVHSLRTAGTTRKIHCLISNEVSAPVRKQLEEHFDDV 57
Score = 55.6 bits (128), Expect = 3e-08
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = +2
Query: 539 GSFDGGDQGLLNSFFSDWAHGDINKHLPFLYNVTTAAF 652
GS+DGGDQGLLN FFS+W LPF+YN+T AF
Sbjct: 156 GSYDGGDQGLLNDFFSNWRDLPSEHRLPFIYNMTAGAF 193
>U64599-4|AAB04562.1| 429|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 5, isoform a
protein.
Length = 429
Score = 136 bits (329), Expect = 1e-32
Identities = 57/86 (66%), Positives = 71/86 (82%)
Frame = +1
Query: 256 DVLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELS 435
DV +S D+ +L L++RP+LG+TFTK+HCW LTQY KCVFLDAD LV++N DELF R + S
Sbjct: 61 DVFNSNDSDNLRLIERPDLGVTFTKLHCWRLTQYTKCVFLDADTLVLRNADELFTRPDFS 120
Query: 436 AAPDVGWPDCFNSGVFVFKPSNETSR 513
AA D+GWPD FNSGVFV+ P+NET R
Sbjct: 121 AASDIGWPDSFNSGVFVYVPNNETYR 146
Score = 56.8 bits (131), Expect = 1e-08
Identities = 28/56 (50%), Positives = 36/56 (64%)
Frame = +2
Query: 80 NRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEV 247
+ AW+TLATND+Y GALVL HSLR AG+ LI+ VS +R +L F +V
Sbjct: 2 SEAWITLATNDNYAQGALVLVHSLRTAGTTRKIHCLISNEVSAPVRKQLEEHFDDV 57
Score = 55.6 bits (128), Expect = 3e-08
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = +2
Query: 539 GSFDGGDQGLLNSFFSDWAHGDINKHLPFLYNVTTAAF 652
GS+DGGDQGLLN FFS+W LPF+YN+T AF
Sbjct: 156 GSYDGGDQGLLNDFFSNWRDLPSEHRLPFIYNMTAGAF 193
>Z82052-1|CAB04823.1| 300|Caenorhabditis elegans Hypothetical
protein T25E12.5 protein.
Length = 300
Score = 128 bits (309), Expect = 4e-30
Identities = 53/81 (65%), Positives = 66/81 (81%)
Frame = +1
Query: 256 DVLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELS 435
D+ +S D+ +L+L+ RP+LG+TFTK HCW LTQY K VFLDAD ++I+N DELFER + S
Sbjct: 61 DIFNSNDSENLSLIGRPDLGVTFTKFHCWRLTQYSKAVFLDADTMIIRNSDELFERPDFS 120
Query: 436 AAPDVGWPDCFNSGVFVFKPS 498
AA D+GWPD FNSGVFVF PS
Sbjct: 121 AAADIGWPDMFNSGVFVFTPS 141
Score = 52.8 bits (121), Expect = 2e-07
Identities = 22/38 (57%), Positives = 26/38 (68%)
Frame = +2
Query: 539 GSFDGGDQGLLNSFFSDWAHGDINKHLPFLYNVTTAAF 652
GSFDGGDQGLLN +FS+W LPF+YN+T F
Sbjct: 156 GSFDGGDQGLLNEYFSNWRDLPSAHRLPFIYNMTAGEF 193
Score = 51.2 bits (117), Expect = 7e-07
Identities = 25/54 (46%), Positives = 34/54 (62%)
Frame = +2
Query: 86 AWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEV 247
AW+TLATND Y GAL L +SL +G+ LIT +S ++R++L F EV
Sbjct: 4 AWITLATNDRYAQGALTLLNSLHASGTTRRIHCLITNEISNSVREKLVNKFDEV 57
>AL132862-24|CAB60560.1| 173|Caenorhabditis elegans Hypothetical
protein Y73F8A.31 protein.
Length = 173
Score = 79.8 bits (188), Expect = 2e-15
Identities = 41/81 (50%), Positives = 52/81 (64%)
Frame = +1
Query: 256 DVLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELS 435
D +S D+ +L+L+ RP+L VFLDAD ++I+NCDELFER + S
Sbjct: 59 DFFNSNDSENLSLIGRPDLA-----------------VFLDADTMIIRNCDELFERPDFS 101
Query: 436 AAPDVGWPDCFNSGVFVFKPS 498
AA D+GWPD FNSGVFVF PS
Sbjct: 102 AAADIGWPDMFNSGVFVFTPS 122
Score = 44.4 bits (100), Expect = 8e-05
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = +2
Query: 539 GSFDGGDQGLLNSFFSDWAHGDINKHLPFLYNVT 640
GSFD GDQGLL +FS+W LPF+YN+T
Sbjct: 137 GSFDDGDQGLLIEYFSNWNDLSSAHRLPFIYNMT 170
>AF038621-1|AAB94141.4| 89|Caenorhabditis elegans Hypothetical
protein M116.2 protein.
Length = 89
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/38 (55%), Positives = 26/38 (68%)
Frame = +2
Query: 539 GSFDGGDQGLLNSFFSDWAHGDINKHLPFLYNVTTAAF 652
GSFDG DQGLLN++FS+W LPF+YN+T F
Sbjct: 27 GSFDGRDQGLLNAYFSNWRDLSSAHRLPFIYNMTAGEF 64
>Z72514-9|CAA96680.3| 449|Caenorhabditis elegans Hypothetical
protein T10B10.8 protein.
Length = 449
Score = 46.8 bits (106), Expect = 2e-05
Identities = 27/62 (43%), Positives = 36/62 (58%)
Frame = +1
Query: 322 FTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAPDVGWPDCFNSGVFVFKPSN 501
+TKI W +T+++ V LD DIL ++ LFE A+ D FNSGVFV K +N
Sbjct: 99 YTKIRLWAMTEFDVIVHLDLDILPTRDISTLFECGSFCAS--FRHSDMFNSGVFVLK-TN 155
Query: 502 ET 507
ET
Sbjct: 156 ET 157
Score = 33.1 bits (72), Expect = 0.20
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +2
Query: 542 SFDGGDQGLLNSFFSD 589
S+DGGDQG LN++FSD
Sbjct: 171 SYDGGDQGFLNTYFSD 186
>Z68001-3|CAO78709.1| 449|Caenorhabditis elegans Hypothetical
protein T10B10.8 protein.
Length = 449
Score = 46.8 bits (106), Expect = 2e-05
Identities = 27/62 (43%), Positives = 36/62 (58%)
Frame = +1
Query: 322 FTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAPDVGWPDCFNSGVFVFKPSN 501
+TKI W +T+++ V LD DIL ++ LFE A+ D FNSGVFV K +N
Sbjct: 99 YTKIRLWAMTEFDVIVHLDLDILPTRDISTLFECGSFCAS--FRHSDMFNSGVFVLK-TN 155
Query: 502 ET 507
ET
Sbjct: 156 ET 157
Score = 33.1 bits (72), Expect = 0.20
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +2
Query: 542 SFDGGDQGLLNSFFSD 589
S+DGGDQG LN++FSD
Sbjct: 171 SYDGGDQGFLNTYFSD 186
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,348,886
Number of Sequences: 27780
Number of extensions: 302171
Number of successful extensions: 897
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 895
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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