Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0013
         (616 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    23   2.0  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   3.6  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   6.2  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   6.2  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   8.2  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +3

Query: 102 WLLEPKDIHNVNTPPILRYK 161
           WL  P  + N  TP  LR+K
Sbjct: 7   WLTPPHSLGNTVTPVSLRFK 26


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -1

Query: 457 INGHYTVMYFCILIFIYNIYLN 392
           I  +Y ++YFC ++   N  +N
Sbjct: 326 IEKYYNILYFCRIMVYLNSAIN 347


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -1

Query: 472 KLLHYINGHYTVMYFCILIFIYN 404
           K+     G +  +YFCI  +IY+
Sbjct: 245 KIASQFVGIFCSLYFCIFGYIYD 267


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -1

Query: 472 KLLHYINGHYTVMYFCILIFIYN 404
           K+     G +  +YFCI  +IY+
Sbjct: 70  KIASQFVGIFCSLYFCIFGYIYD 92


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = +1

Query: 70  WTSSQPTCLLSGYW 111
           WTS +    L G+W
Sbjct: 294 WTSKEKISFLRGFW 307


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,668
Number of Sequences: 336
Number of extensions: 2623
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)