BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0010
(698 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_10010| Best HMM Match : HLH (HMM E-Value=8.5e-09) 43 2e-04
SB_40771| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_9980| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.042
SB_30776| Best HMM Match : HLH (HMM E-Value=1.7e-13) 33 0.17
SB_29054| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_25442| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_27282| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.68
SB_15721| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.68
SB_9976| Best HMM Match : PIP5K (HMM E-Value=2) 31 0.90
SB_5702| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_40639| Best HMM Match : CAP_GLY (HMM E-Value=0) 31 1.2
SB_49233| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_30622| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-14) 31 1.2
SB_43750| Best HMM Match : NAP (HMM E-Value=3.3) 30 1.6
SB_44231| Best HMM Match : Ion_trans_2 (HMM E-Value=6.5e-09) 30 2.1
SB_49930| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_34087| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_23556| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_25662| Best HMM Match : HLH (HMM E-Value=2.3e-14) 29 2.7
SB_899| Best HMM Match : Alpha_L_fucos (HMM E-Value=0) 29 2.7
SB_39668| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_54715| Best HMM Match : Hexapep (HMM E-Value=1.2e-05) 29 4.8
SB_45809| Best HMM Match : Vicilin_N (HMM E-Value=4.5) 29 4.8
SB_39750| Best HMM Match : Borrelia_orfA (HMM E-Value=1.1) 29 4.8
SB_1992| Best HMM Match : Geminin (HMM E-Value=0.0018) 29 4.8
SB_41073| Best HMM Match : GRP (HMM E-Value=2.8) 28 6.3
SB_16794| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_49776| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_45371| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_32347| Best HMM Match : RCC1 (HMM E-Value=0.00072) 28 8.4
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 28 8.4
SB_3318| Best HMM Match : Xan_ur_permease (HMM E-Value=7.20267e-43) 28 8.4
>SB_10010| Best HMM Match : HLH (HMM E-Value=8.5e-09)
Length = 227
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = +2
Query: 404 FKERRREAHTQAEQKRRDAIKKGYDSLQDLVPT 502
+KE RR +H AEQKRR IK G+D L +VPT
Sbjct: 16 YKEHRRMSHISAEQKRRCNIKMGFDQLASMVPT 48
>SB_40771| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 553
Score = 37.9 bits (84), Expect = 0.008
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +2
Query: 332 TPSSSNQNTEDEDDSGDNKASAL-SFKERRREAHTQAEQKRRDAIKKGYDSLQDLVPTCQ 508
TP S+ + + + + ++ S S R+EAH + E+KRR+ I + + L+ ++P+C
Sbjct: 452 TPRSTKRKRDSINSAVNHSTSKTPSTPAERKEAHLEKERKRRERIARSWFLLRSMIPSCS 511
Query: 509 RVMRLAT 529
AT
Sbjct: 512 DTADKAT 518
>SB_9980| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 35.5 bits (78), Expect = 0.042
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = +2
Query: 392 SALSFKERRREAHTQAEQKRRDAIK 466
S+ S K+ RR AH+ AEQKRRDAIK
Sbjct: 34 SSSSSKQNRRFAHSVAEQKRRDAIK 58
>SB_30776| Best HMM Match : HLH (HMM E-Value=1.7e-13)
Length = 1217
Score = 33.5 bits (73), Expect = 0.17
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +2
Query: 338 SSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQDLVPTCQR 511
S +N T S + ++ + RRR H + E++R+D I L ++VP C R
Sbjct: 112 SPTNNKTPYYISSDIVLSGGIAQQTRRRIVHNEVERRRKDKINNWITKLAEVVPDCAR 169
>SB_29054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 515
Score = 32.7 bits (71), Expect = 0.29
Identities = 24/103 (23%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Frame = +2
Query: 344 SNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQDLVPTCQRVMRL 523
++Q + DD + A AL+ +E +REA +A+ + K+G + + + R
Sbjct: 291 ADQMQQKVDDEDERIAKALAEREAKREAEERAKFEADMKEKRGIH--EHRISMMRESERK 348
Query: 524 ATNQAK--LQSFRNQLTTSSICYNSVVDREEERMHCVKMLSLF 646
A +AK + R ++ + + + V+++ E++H K L F
Sbjct: 349 AAEEAKRDQEILRKRVESDKLYHAKQVEKKLEKLHETKNLKTF 391
>SB_25442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1010
Score = 32.7 bits (71), Expect = 0.29
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +2
Query: 419 REAHTQAEQKRRDAIKKGYDSLQDLVPTCQRVMRLATNQAKLQSFRNQLTTSSICYNSVV 598
RE H++ E++RR+ + + L D+VP+C + R L+ N + T Y +
Sbjct: 14 RENHSEIERRRRNKMNAYINELSDMVPSCTGLARKPDKLTVLRMAVNYMKTLRGDYMIFI 73
Query: 599 DREEER 616
R +R
Sbjct: 74 RRGAKR 79
>SB_27282| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 644
Score = 31.5 bits (68), Expect = 0.68
Identities = 14/23 (60%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
Frame = +2
Query: 332 TPSSS-NQNTEDEDDSGDNKASA 397
TPSSS N +T+D+DD DNK +A
Sbjct: 494 TPSSSDNDDTQDDDDKSDNKPNA 516
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/23 (52%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
Frame = +2
Query: 332 TPSSSN-QNTEDEDDSGDNKASA 397
TPSSS+ +T+D+D+ DNK +A
Sbjct: 560 TPSSSDGDDTQDDDEKSDNKPNA 582
>SB_15721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 31.5 bits (68), Expect = 0.68
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +2
Query: 371 DSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQDLVPTCQRVMR 520
DSGD+K K ++ H++ E++RRD + + L ++P C + R
Sbjct: 172 DSGDSKGFQ---KGAIKQNHSEIEKRRRDKMNTYINELSTMIPMCNAMSR 218
>SB_9976| Best HMM Match : PIP5K (HMM E-Value=2)
Length = 673
Score = 31.1 bits (67), Expect = 0.90
Identities = 27/116 (23%), Positives = 48/116 (41%), Gaps = 2/116 (1%)
Frame = +2
Query: 104 LIRVMKYLSKTILYL*CYQCILHTLHRNNGTRHHELRKVKDRINVMFYFIKFHYNN*Y-P 280
++ +++ S T L + C+ + H + R+ + + M F + H+ P
Sbjct: 329 VLEEIRFASLTTLSVECFFKAMRADHDMPTMVEYAYRRARCVEDYMLRFYQKHFTYFTGP 388
Query: 281 N-MYPRCGSSGSIQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQ 445
N YP SG ++ Q PS Q E D +++ A + +E RE A Q
Sbjct: 389 NSFYPEKIISGDPPSLMQRPSKKTQTKEGTSDETEDRRRAETMQEFTREYGRGARQ 444
>SB_5702| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 217
Score = 31.1 bits (67), Expect = 0.90
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +2
Query: 299 GSSGSIQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQ 445
G S SI +Q P Q+ +D +D D+ A+ SF+ +AH A Q
Sbjct: 2 GHSASIAKKYQAPK---QHVDDTNDEVDSLATVSSFRPTSPDAHNDARQ 47
>SB_40639| Best HMM Match : CAP_GLY (HMM E-Value=0)
Length = 709
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +3
Query: 330 KRRPPQIKTQRMKMTVVTTRHLHSVSKREEGKLTHRQSRKEEMQLRKAMIHSKTLCL 500
+ R P+ T + M + TRH H+V + L+ R + E + KT CL
Sbjct: 150 RNRKPEQGTGKRNMMLAETRHTHAVPSSQAPALSSRHRKPEIKKSHSPNKRLKTRCL 206
>SB_49233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 309
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 305 SGSIQNIHQTPSSSNQNTEDEDDSGDNKA 391
SG+++ QTPS +N NT DSG A
Sbjct: 4 SGALKEEQQTPSDTNNNTNGSSDSGGGGA 32
>SB_30622| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-14)
Length = 856
Score = 30.7 bits (66), Expect = 1.2
Identities = 10/27 (37%), Positives = 20/27 (74%)
Frame = -2
Query: 466 LNCISSFLLCLCVSFPSSLFETECRCL 386
LNC +++ +C+C + S+++E+ RCL
Sbjct: 637 LNCQTNYFVCICDARESTIYESLSRCL 663
>SB_43750| Best HMM Match : NAP (HMM E-Value=3.3)
Length = 514
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = +2
Query: 296 CGSSGSIQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKK 469
CGSSG + + P+ + E+ + S + + +R+RE Q EQ+R+ A++K
Sbjct: 437 CGSSGRKKRQAEMPAPVSTVQEETERSINMCPPGIWVCDRKRELKRQREQRRQAAMEK 494
>SB_44231| Best HMM Match : Ion_trans_2 (HMM E-Value=6.5e-09)
Length = 441
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +2
Query: 305 SGSIQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDA 460
S +++ HQ +S+ + + D A+ K+RR E QA +KR +A
Sbjct: 357 SSVVEDFHQNLTSTIERLRERHDQDMRNYIAILKKQRRNENKYQAYEKREEA 408
>SB_49930| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 281 NMYPRCGSSGSIQNIHQTPSSSNQNTEDED 370
N +P G +GS+QNI QT SS +D
Sbjct: 187 NTHPLSGQTGSLQNIIQTKKSSTDYASRDD 216
>SB_34087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 831
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 8/71 (11%)
Frame = +2
Query: 428 HTQAEQKRRDAIKKGYDSLQDLVPTCQRVMR--------LATNQAKLQSFRNQLTTSSIC 583
+T EQ+ R + Q P C R + + T+Q+K + ++ T C
Sbjct: 271 NTGREQEHRTCASEHVQQPQGNPPPCHRQQQQETQQHITIGTSQSKNSGYEDETATVYPC 330
Query: 584 YNSVVDREEER 616
Y S+VDR+ +
Sbjct: 331 YLSIVDRQSSK 341
>SB_23556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 671
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/68 (27%), Positives = 32/68 (47%)
Frame = +2
Query: 44 KFDFSITLRKCYVTTWFKSDLIRVMKYLSKTILYL*CYQCILHTLHRNNGTRHHELRKVK 223
K +F+ L + T + V+ Y+S ++ YQ I H N TR+H++ K
Sbjct: 253 KMEFTARLTLNWKFTHLDQRGLSVIGYMSNELVGSSLYQNI-HPNDLENITRYHKILVYK 311
Query: 224 DRINVMFY 247
R+N +Y
Sbjct: 312 GRVNTCYY 319
>SB_25662| Best HMM Match : HLH (HMM E-Value=2.3e-14)
Length = 468
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/65 (26%), Positives = 28/65 (43%)
Frame = +2
Query: 413 RRREAHTQAEQKRRDAIKKGYDSLQDLVPTCQRVMRLATNQAKLQSFRNQLTTSSICYNS 592
RRR ++E++RRD + L +VP C + LQ N + + S
Sbjct: 137 RRRTTRNESEKRRRDKLNVYITELAAMVPMCASSRKKLDKTTVLQMAVNYMKIHNDLTTS 196
Query: 593 VVDRE 607
V+ +E
Sbjct: 197 VLAKE 201
>SB_899| Best HMM Match : Alpha_L_fucos (HMM E-Value=0)
Length = 1127
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Frame = +2
Query: 335 PSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQDLVPTCQRV 514
P + N+ D+DD D F+ + ++ ++ K+R + KKG++ Q + +
Sbjct: 1038 PGAKNKKKHDDDDDDDEGGGDDKFEPKHKKKG-RSSSKKRHSRKKGHEEQQKKETIRKEI 1096
Query: 515 --MRLATNQAKLQSFRNQLTT 571
R Q K + R LTT
Sbjct: 1097 NEKRKKKRQDKADASRIGLTT 1117
>SB_39668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 122
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/73 (24%), Positives = 33/73 (45%)
Frame = +2
Query: 302 SSGSIQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDS 481
S+ + ++ + SS + +T +ED S D S F +E + EQ+ +
Sbjct: 15 STETFEDYSDSESSQSDHTTNEDSSSDETESMDRFHGHWKELVAKYEQRGNSEEVAEAKA 74
Query: 482 LQDLVPTCQRVMR 520
DLVP ++ +R
Sbjct: 75 TNDLVPHYRKELR 87
>SB_54715| Best HMM Match : Hexapep (HMM E-Value=1.2e-05)
Length = 1143
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +2
Query: 329 QTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKK 469
+T S +T D D S D+ ++ S +ER + H + ++KR+ IKK
Sbjct: 745 ETKKSRKYSTTDSDCSSDDGENSDSSRERSIKKH-KKKKKRKKKIKK 790
>SB_45809| Best HMM Match : Vicilin_N (HMM E-Value=4.5)
Length = 215
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +2
Query: 356 TEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDS 481
+ D DD K S+ S K+R R + +++ ++RR + + DS
Sbjct: 5 SSDSDDDRRRKRSSKSSKKRDRRSRSRSRERRRRSKSRDRDS 46
>SB_39750| Best HMM Match : Borrelia_orfA (HMM E-Value=1.1)
Length = 810
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/50 (24%), Positives = 24/50 (48%)
Frame = +2
Query: 335 PSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSL 484
PSS + S NK S +SF + + E+++++ + K Y ++
Sbjct: 371 PSSKSHKKSSSKSSSSNKLSKISFLRKLMDGKILTEEQKKEELAKLYAAI 420
>SB_1992| Best HMM Match : Geminin (HMM E-Value=0.0018)
Length = 155
Score = 28.7 bits (61), Expect = 4.8
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +2
Query: 302 SSGSIQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQ-AEQKRRDAIKKGYD 478
SS S SSS Q T+D+ S ++A AL +E E++ Q ++RR A+++ +
Sbjct: 67 SSDSSDTESTKRSSSEQVTDDDKKSVSDEAFALMIQEPAPESYWQLLAEERRLALQETLE 126
Query: 479 SLQDLV 496
Q +V
Sbjct: 127 ENQRMV 132
>SB_41073| Best HMM Match : GRP (HMM E-Value=2.8)
Length = 305
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 293 RCGSSGSIQNIHQTPSSSNQNTEDEDDSGDN 385
R G +G Q H+ ++N N D D+ DN
Sbjct: 22 RKGGNGYFQTTHRELDNNNDNDNDNDNDNDN 52
>SB_16794| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1407
Score = 28.3 bits (60), Expect = 6.3
Identities = 21/98 (21%), Positives = 43/98 (43%)
Frame = +2
Query: 284 MYPRCGSSGSIQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAI 463
M+ + SG + + ++ + Q E+E +K ++ RREA + E++ D
Sbjct: 387 MFEKISRSGELADSYEKKKAEMQKAEEETSFNYHKKKGIA--AERREA--KQEKEEADKY 442
Query: 464 KKGYDSLQDLVPTCQRVMRLATNQAKLQSFRNQLTTSS 577
K L D + Q + +L N+ + +++ T S
Sbjct: 443 NKWNQDLVDSLQELQ-LFKLYHNEQDISHMTSEMKTKS 479
>SB_49776| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/21 (61%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = -2
Query: 448 FLLCLCVSFPSSLFE-TECRC 389
FLL +C SF SSLF T C+C
Sbjct: 17 FLLRICTSFGSSLFPGTSCQC 37
>SB_45371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +2
Query: 293 RCGSSGSIQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRR 454
R G SG + ++ +SN T+ +DDS D K ++R+++ ++ E+KR+
Sbjct: 89 RWGHSG-YKELYPEEFASNF-TDSDDDSEDEKKKKKKTSKKRKKSSSKDERKRK 140
>SB_32347| Best HMM Match : RCC1 (HMM E-Value=0.00072)
Length = 677
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +2
Query: 164 ILHTLHRNNGTRHHELRKVKDRINVMFYFIKF 259
I+ T+H NN RHH + I + F KF
Sbjct: 237 IITTIHHNNHHRHHHITTTIIIIGITLIFSKF 268
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/29 (37%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +2
Query: 299 GSSGSIQNIHQT-PSSSNQNTEDEDDSGD 382
G +G N+H++ P ++N +D+DD+GD
Sbjct: 783 GETGEEFNLHRSRPLIHDENDDDDDDNGD 811
>SB_3318| Best HMM Match : Xan_ur_permease (HMM E-Value=7.20267e-43)
Length = 774
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/61 (19%), Positives = 30/61 (49%)
Frame = +2
Query: 203 HELRKVKDRINVMFYFIKFHYNN*YPNMYPRCGSSGSIQNIHQTPSSSNQNTEDEDDSGD 382
H+ K + ++ + ++ NN N ++ + N + +++N N +D+DD+ D
Sbjct: 564 HQQTSTKLNLLLLLLLLLYNNNNDNNNNNNNNNNNNNNNNNNNNNNNNNNNADDDDDAAD 623
Query: 383 N 385
+
Sbjct: 624 D 624
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,318,970
Number of Sequences: 59808
Number of extensions: 386171
Number of successful extensions: 1748
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1713
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -