Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0010
(698 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY835432-1|AAX37359.1| 467|Caenorhabditis elegans bZIP transcri... 46 3e-05
AF016440-1|ABA54419.1| 467|Caenorhabditis elegans Abnormal ever... 46 3e-05
U10401-4|AAN65289.1| 937|Caenorhabditis elegans Myc and mondo-l... 42 3e-04
U10401-3|AAA19059.2| 1009|Caenorhabditis elegans Myc and mondo-l... 42 3e-04
AF264757-1|AAK20949.1| 1009|Caenorhabditis elegans Mlx interacto... 42 3e-04
AF213473-1|AAL50027.1| 913|Caenorhabditis elegans basic helix-l... 42 3e-04
Z70206-4|CAA94125.1| 235|Caenorhabditis elegans Hypothetical pr... 40 0.002
AF099919-10|AAC68792.1| 205|Caenorhabditis elegans Max-like pro... 38 0.005
Z74043-6|CAA98543.1| 124|Caenorhabditis elegans Hypothetical pr... 34 0.085
U82967-1|AAB40926.1| 124|Caenorhabditis elegans MAX-like-1 homo... 34 0.085
Z68298-7|CAA92604.1| 447|Caenorhabditis elegans Hypothetical pr... 31 0.79
U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical pr... 31 0.79
DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determini... 31 0.79
Z81038-7|CAB02764.1| 453|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z77132-4|CAB00862.3| 536|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z75527-2|CAA99775.2| 636|Caenorhabditis elegans Hypothetical pr... 31 1.0
AF370361-1|AAK52514.1| 636|Caenorhabditis elegans putative tran... 31 1.0
AF083225-1|AAD03683.1| 536|Caenorhabditis elegans nuclear recep... 31 1.0
AF039569-1|AAB99999.1| 451|Caenorhabditis elegans aryl hydrocar... 31 1.0
AC084197-15|AAN63425.1| 391|Caenorhabditis elegans Hypothetical... 31 1.0
AC084197-14|AAM44396.1| 526|Caenorhabditis elegans Hypothetical... 31 1.0
AC084197-13|AAM44395.1| 571|Caenorhabditis elegans Hypothetical... 31 1.0
AB096001-1|BAE53417.1| 676|Caenorhabditis elegans bHLH-PAS fact... 31 1.0
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 30 1.4
Z75525-3|CAA99762.3| 245|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z79601-6|CAB01887.1| 872|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z79596-9|CAB01859.1| 872|Caenorhabditis elegans Hypothetical pr... 29 3.2
AC024781-3|AAK39330.2| 2203|Caenorhabditis elegans Prion-like-(q... 29 3.2
Z34799-7|CAA84320.2| 574|Caenorhabditis elegans Hypothetical pr... 29 4.2
U80441-11|AAB37660.3| 1037|Caenorhabditis elegans Hypothetical p... 29 4.2
U41556-12|AAK39191.2| 477|Caenorhabditis elegans Nuclear hormon... 29 4.2
AY305848-1|AAR11992.1| 477|Caenorhabditis elegans nuclear recep... 29 4.2
AF149288-1|AAF99087.1| 644|Caenorhabditis elegans KRP85 protein. 29 4.2
AC024801-1|AAK68513.1| 646|Caenorhabditis elegans Kinesin-like ... 29 4.2
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 5.6
U58761-7|AAB00717.1| 481|Caenorhabditis elegans Hypothetical pr... 28 7.4
AL117204-29|CAB55138.1| 1097|Caenorhabditis elegans Hypothetical... 28 7.4
AC025724-10|AAG23372.2| 1073|Caenorhabditis elegans Hypothetical... 28 7.4
AC024843-12|AAF60833.3| 986|Caenorhabditis elegans Hypothetical... 28 7.4
Z50029-8|CAA90342.2| 668|Caenorhabditis elegans Hypothetical pr... 27 9.8
L14331-8|AAA28100.1| 586|Caenorhabditis elegans C.elegans homeo... 27 9.8
>AY835432-1|AAX37359.1| 467|Caenorhabditis elegans bZIP
transcription factor FOS-1a protein.
Length = 467
Score = 46.0 bits (104), Expect = 3e-05
Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 2/127 (1%)
Frame = +2
Query: 263 YNN*YPNMYPRCGSSGSIQNIHQTPSSSNQNTEDEDD-SGDNKASALSFKERRREAHTQA 439
YN + + Y SS +Q SS+ + ++ED+ D+ L ++R +EA +
Sbjct: 121 YNRTFTDFYSTAASSPMVQYSTVKKSSAGRKPKEEDNMEDDDDDKRLKRRQRNKEAAARC 180
Query: 440 EQKRRDAIKKGYDSLQDLVPTCQRVMRLATN-QAKLQSFRNQLTTSSICYNSVVDREEER 616
Q+R D +K+ D + D + + M N + KL S +N L T C S EER
Sbjct: 181 RQRRIDLMKELQDQVNDFKNSNDKKMAECNNIRNKLNSLKNYLETHD-CKLS----REER 235
Query: 617 MHCVKML 637
H + L
Sbjct: 236 THEINRL 242
>AF016440-1|ABA54419.1| 467|Caenorhabditis elegans Abnormal
eversion of vulva protein5, isoform b protein.
Length = 467
Score = 46.0 bits (104), Expect = 3e-05
Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 2/127 (1%)
Frame = +2
Query: 263 YNN*YPNMYPRCGSSGSIQNIHQTPSSSNQNTEDEDD-SGDNKASALSFKERRREAHTQA 439
YN + + Y SS +Q SS+ + ++ED+ D+ L ++R +EA +
Sbjct: 121 YNRTFTDFYSTAASSPMVQYSTVKKSSAGRKPKEEDNMEDDDDDKRLKRRQRNKEAAARC 180
Query: 440 EQKRRDAIKKGYDSLQDLVPTCQRVMRLATN-QAKLQSFRNQLTTSSICYNSVVDREEER 616
Q+R D +K+ D + D + + M N + KL S +N L T C S EER
Sbjct: 181 RQRRIDLMKELQDQVNDFKNSNDKKMAECNNIRNKLNSLKNYLETHD-CKLS----REER 235
Query: 617 MHCVKML 637
H + L
Sbjct: 236 THEINRL 242
>U10401-4|AAN65289.1| 937|Caenorhabditis elegans Myc and mondo-like
protein 1, isoformb protein.
Length = 937
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +2
Query: 392 SALSFKERRREAHTQAEQKRRDAIKKGYDSLQDLVP 499
S L +ER+R H AEQ RR A+K G+D L D++P
Sbjct: 796 STLHPEERKRILHLHAEQNRRSALKDGFDQLMDIIP 831
>U10401-3|AAA19059.2| 1009|Caenorhabditis elegans Myc and mondo-like
protein 1, isoforma protein.
Length = 1009
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +2
Query: 392 SALSFKERRREAHTQAEQKRRDAIKKGYDSLQDLVP 499
S L +ER+R H AEQ RR A+K G+D L D++P
Sbjct: 796 STLHPEERKRILHLHAEQNRRSALKDGFDQLMDIIP 831
>AF264757-1|AAK20949.1| 1009|Caenorhabditis elegans Mlx interactor
protein.
Length = 1009
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +2
Query: 392 SALSFKERRREAHTQAEQKRRDAIKKGYDSLQDLVP 499
S L +ER+R H AEQ RR A+K G+D L D++P
Sbjct: 796 STLHPEERKRILHLHAEQNRRSALKDGFDQLMDIIP 831
>AF213473-1|AAL50027.1| 913|Caenorhabditis elegans basic
helix-loop-helix leucinezipper WBSCR14-like protein
protein.
Length = 913
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +2
Query: 392 SALSFKERRREAHTQAEQKRRDAIKKGYDSLQDLVP 499
S L +ER+R H AEQ RR A+K G+D L D++P
Sbjct: 700 STLHPEERKRILHLHAEQNRRSALKDGFDQLMDIIP 735
>Z70206-4|CAA94125.1| 235|Caenorhabditis elegans Hypothetical
protein F46G10.6 protein.
Length = 235
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +2
Query: 347 NQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQDLVP 499
+ + +DDS K+++ S + RR H + E++RRD IK + L+D +P
Sbjct: 25 HHSDSSDDDSSSPKSASPSMDDDRRAHHNELERRRRDHIKDHFTILKDAIP 75
>AF099919-10|AAC68792.1| 205|Caenorhabditis elegans Max-like
protein 2 protein.
Length = 205
Score = 38.3 bits (85), Expect = 0.005
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2
Query: 410 ERRREAHTQAEQKRRDAIKKGYDSLQDLVPTCQRVMRLATNQAKL 544
+R++ H + E++RR+AI GY L+DL+P + T A +
Sbjct: 46 DRKKATHLRCERQRREAINSGYSDLKDLIPQTTTSLGCKTTNAAI 90
>Z74043-6|CAA98543.1| 124|Caenorhabditis elegans Hypothetical
protein T19B10.11 protein.
Length = 124
Score = 34.3 bits (75), Expect = 0.085
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 407 KERRREAHTQAEQKRRDAIKKGYDSLQDLVP 499
K RE H E++RRD IK Y SL+++VP
Sbjct: 27 KRHAREQHNALERRRRDNIKDMYTSLREVVP 57
>U82967-1|AAB40926.1| 124|Caenorhabditis elegans MAX-like-1 homolog
protein.
Length = 124
Score = 34.3 bits (75), Expect = 0.085
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 407 KERRREAHTQAEQKRRDAIKKGYDSLQDLVP 499
K RE H E++RRD IK Y SL+++VP
Sbjct: 27 KRHAREQHNALERRRRDNIKDMYTSLREVVP 57
>Z68298-7|CAA92604.1| 447|Caenorhabditis elegans Hypothetical
protein F44D12.8 protein.
Length = 447
Score = 31.1 bits (67), Expect = 0.79
Identities = 12/44 (27%), Positives = 28/44 (63%)
Frame = +2
Query: 323 IHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRR 454
++Q+ S+ N N + D+ D +A + + K +++ +HT ++ +RR
Sbjct: 116 VNQSLSAENTNAKTSSDN-DERAGSKNDKPKKKNSHTSSDSRRR 158
>U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical
protein F52C9.7 protein.
Length = 451
Score = 31.1 bits (67), Expect = 0.79
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +2
Query: 302 SSGSIQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKK 469
SSGS ++ H+T SS + D+D+ D + + E R+ + E++ R K+
Sbjct: 284 SSGS-ESEHETRSSHRRRNSDDDERQDPRKKSYGLVEMRKRTAEEREEESRAPTKE 338
>DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determining
protein MOG-3 protein.
Length = 451
Score = 31.1 bits (67), Expect = 0.79
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +2
Query: 302 SSGSIQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKK 469
SSGS ++ H+T SS + D+D+ D + + E R+ + E++ R K+
Sbjct: 284 SSGS-ESEHETRSSHRRRNSDDDERQDPRKKSYGLVEMRKRTAEEREEESRAPTKE 338
>Z81038-7|CAB02764.1| 453|Caenorhabditis elegans Hypothetical
protein C25A1.11 protein.
Length = 453
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +2
Query: 365 EDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQDLVPTCQRVMR 520
ED+ G+NK + RE H++ E++RR+ + + L ++VP C + R
Sbjct: 34 EDEMGENK------ERFARENHSEIERRRRNKMTHYINELAEMVPQCASLGR 79
>Z77132-4|CAB00862.3| 536|Caenorhabditis elegans Hypothetical
protein F54D1.4 protein.
Length = 536
Score = 30.7 bits (66), Expect = 1.0
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = +3
Query: 276 IPICI--LVVAVADLFKTYIKRRPPQIKTQRMKMTVVTTRHLHSVSKREEGKLTHRQSRK 449
+PIC L +AD+F+TY+++ P I+ +K +V + +S L+ +
Sbjct: 253 LPICTTHLTQKIADVFETYLRKPPSIIEYSVLKAYIVLSAESTVLSNSLNESLSLARENL 312
Query: 450 EEMQLRKAMIHSK 488
E+ L K + HS+
Sbjct: 313 SEL-LFKVIKHSR 324
>Z75527-2|CAA99775.2| 636|Caenorhabditis elegans Hypothetical
protein C15C8.2 protein.
Length = 636
Score = 30.7 bits (66), Expect = 1.0
Identities = 22/67 (32%), Positives = 34/67 (50%)
Frame = +2
Query: 299 GSSGSIQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYD 478
GSSGS N + + + N NT +G + S L ++R + A ++RRD I
Sbjct: 41 GSSGSALN-NNSINVPNNNTMGMSSAGSSNGSNLVNGQQR--STRGASKQRRDQINVEIQ 97
Query: 479 SLQDLVP 499
L+DL+P
Sbjct: 98 KLRDLLP 104
>AF370361-1|AAK52514.1| 636|Caenorhabditis elegans putative
transcription factor C15C8.2protein.
Length = 636
Score = 30.7 bits (66), Expect = 1.0
Identities = 22/67 (32%), Positives = 34/67 (50%)
Frame = +2
Query: 299 GSSGSIQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYD 478
GSSGS N + + + N NT +G + S L ++R + A ++RRD I
Sbjct: 41 GSSGSALN-NNSINVPNNNTMGMSSAGSSNGSNLVNGQQR--STRGASKQRRDQINVEIQ 97
Query: 479 SLQDLVP 499
L+DL+P
Sbjct: 98 KLRDLLP 104
>AF083225-1|AAD03683.1| 536|Caenorhabditis elegans nuclear receptor
NHR-7 protein.
Length = 536
Score = 30.7 bits (66), Expect = 1.0
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = +3
Query: 276 IPICI--LVVAVADLFKTYIKRRPPQIKTQRMKMTVVTTRHLHSVSKREEGKLTHRQSRK 449
+PIC L +AD+F+TY+++ P I+ +K +V + +S L+ +
Sbjct: 253 LPICTTHLTQKIADVFETYLRKPPSIIEYSVLKAYIVLSAESTVLSNSLNESLSLARENL 312
Query: 450 EEMQLRKAMIHSK 488
E+ L K + HS+
Sbjct: 313 SEL-LFKVIKHSR 324
>AF039569-1|AAB99999.1| 451|Caenorhabditis elegans aryl hydrocarbon
receptor nucleartranslocator ortholog AHA-1 protein.
Length = 451
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +2
Query: 365 EDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQDLVPTCQRVMR 520
ED+ G+NK + RE H++ E++RR+ + + L ++VP C + R
Sbjct: 34 EDEMGENK------ERFARENHSEIERRRRNKMTHYINELAEMVPQCASLGR 79
>AC084197-15|AAN63425.1| 391|Caenorhabditis elegans Hypothetical
protein Y73B6BL.5c protein.
Length = 391
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +2
Query: 290 PRCGSSGSIQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQ 436
PR + H SSSN + EDD D + S+ KERRR T+
Sbjct: 207 PRTSENDDKDKKHHGSSSSNSHRRREDDK-DRRQSSDHHKERRRSPATR 254
>AC084197-14|AAM44396.1| 526|Caenorhabditis elegans Hypothetical
protein Y73B6BL.5b protein.
Length = 526
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +2
Query: 290 PRCGSSGSIQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQ 436
PR + H SSSN + EDD D + S+ KERRR T+
Sbjct: 342 PRTSENDDKDKKHHGSSSSNSHRRREDDK-DRRQSSDHHKERRRSPATR 389
>AC084197-13|AAM44395.1| 571|Caenorhabditis elegans Hypothetical
protein Y73B6BL.5a protein.
Length = 571
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +2
Query: 290 PRCGSSGSIQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQ 436
PR + H SSSN + EDD D + S+ KERRR T+
Sbjct: 387 PRTSENDDKDKKHHGSSSSNSHRRREDDK-DRRQSSDHHKERRRSPATR 434
>AB096001-1|BAE53417.1| 676|Caenorhabditis elegans bHLH-PAS factor
protein.
Length = 676
Score = 30.7 bits (66), Expect = 1.0
Identities = 22/67 (32%), Positives = 34/67 (50%)
Frame = +2
Query: 299 GSSGSIQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYD 478
GSSGS N + + + N NT +G + S L ++R + A ++RRD I
Sbjct: 41 GSSGSALN-NNSINVPNNNTMGMSSAGSSNGSNLVNGQQR--STRGASKQRRDQINVEIQ 97
Query: 479 SLQDLVP 499
L+DL+P
Sbjct: 98 KLRDLLP 104
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 365 EDDSGDNKASALSFKERRREAHTQAEQKRRDAIKK 469
+ +GDNK S S E++RE + ++K R + KK
Sbjct: 526 DSKNGDNKKSEKSSSEKKREREMRDDEKERKSSKK 560
>Z75525-3|CAA99762.3| 245|Caenorhabditis elegans Hypothetical
protein C03D6.5 protein.
Length = 245
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 323 IHQTPSSSNQNTEDEDDSGDNKASA---LSFKERRREAHTQAEQK 448
+H ++ ED+D++G N SF ER AH EQK
Sbjct: 180 LHDDGQDDDEEEEDDDETGPNTEEVDLNESFNERMANAHDGTEQK 224
>Z79601-6|CAB01887.1| 872|Caenorhabditis elegans Hypothetical
protein K09A9.6 protein.
Length = 872
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +2
Query: 347 NQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKK 469
+ + +D++D D +A A R+++AH Q E+K +D KK
Sbjct: 207 DDDDDDDEDDDDVEAPAPQEPSRKQKAHNQREEK-KDKNKK 246
>Z79596-9|CAB01859.1| 872|Caenorhabditis elegans Hypothetical
protein K09A9.6 protein.
Length = 872
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +2
Query: 347 NQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKK 469
+ + +D++D D +A A R+++AH Q E+K +D KK
Sbjct: 207 DDDDDDDEDDDDVEAPAPQEPSRKQKAHNQREEK-KDKNKK 246
>AC024781-3|AAK39330.2| 2203|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 85
protein.
Length = 2203
Score = 29.1 bits (62), Expect = 3.2
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Frame = +2
Query: 263 YNN*YPNMYPRCGSSGSIQNIHQTPSSS-NQNTEDEDDSGDNKASALSFKERRREAHT-- 433
YNN + N SS S+ T SSS N D D+ G + +S ++RR+
Sbjct: 472 YNNHHQNSIVMMTSS-SVSMSEATQSSSVTMNHHDVDEEGP---APISIEKRRQMMSVGK 527
Query: 434 ---------QAEQKRRDAIKKGYDSLQD-LVPT 502
Q ++K+RD ++ YDSL D VPT
Sbjct: 528 APKAGGGGGQNQRKKRDMVENLYDSLTDNFVPT 560
>Z34799-7|CAA84320.2| 574|Caenorhabditis elegans Hypothetical
protein F34D10.2 protein.
Length = 574
Score = 28.7 bits (61), Expect = 4.2
Identities = 32/147 (21%), Positives = 63/147 (42%), Gaps = 16/147 (10%)
Frame = +2
Query: 257 FHYNN*YPNMYPRCGSSGSIQNIHQTP---SSSNQNTEDEDDSG-DNKASALSFKERRRE 424
FH N Y N ++ S + Q P S ++++DE+DS D +S+++R +
Sbjct: 106 FHIENVYENGQIHLLANPSEMSELQIPDLESVIREDSDDEEDSDEDEDQEYISYEQRMEK 165
Query: 425 AHTQA---------EQKRRDAIKKGYDSLQDLVPTCQRVMRLATNQAKLQSFRNQLTT-- 571
+A E++RR + + Y+S P+C ++ +A ++ + T
Sbjct: 166 IRRKAIKREEMQIWERQRRTILWRYYESTWFSSPSCVTLLEMAAEMNRVSAETMWFTAVG 225
Query: 572 -SSICYNSVVDREEERMHCVKMLSLFV 649
+S + ++ E CV + FV
Sbjct: 226 LNSAMADKLISIEMYTQICVDRMRPFV 252
>U80441-11|AAB37660.3| 1037|Caenorhabditis elegans Hypothetical
protein F27C1.11 protein.
Length = 1037
Score = 28.7 bits (61), Expect = 4.2
Identities = 23/101 (22%), Positives = 41/101 (40%)
Frame = +2
Query: 311 SIQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQD 490
S + H+TP+ +T + D S ++ K+RR+ R+D + S Q
Sbjct: 358 SAHSSHRTPAQKTPSTSESDRLPSLSKSKMNQKQRRK------TMSRQDTPYQATPSRQT 411
Query: 491 LVPTCQRVMRLATNQAKLQSFRNQLTTSSICYNSVVDREEE 613
T + + + + ++ TTSS V D E+E
Sbjct: 412 TAATEASRLSTSGSSEPHSRYSSRPTTSSTAVREVSDDEDE 452
>U41556-12|AAK39191.2| 477|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 120 protein.
Length = 477
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 287 YPRCGSSGSIQNIHQTPSSSNQNTEDEDDSGDNKAS 394
+ +C G + Q PSS N N D+ DSGD ++
Sbjct: 148 FEKCVRVGMNPSAIQFPSSKNHNEADDMDSGDEDSN 183
>AY305848-1|AAR11992.1| 477|Caenorhabditis elegans nuclear receptor
NHR-120 protein.
Length = 477
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 287 YPRCGSSGSIQNIHQTPSSSNQNTEDEDDSGDNKAS 394
+ +C G + Q PSS N N D+ DSGD ++
Sbjct: 148 FEKCVRVGMNPSAIQFPSSKNHNEADDMDSGDEDSN 183
>AF149288-1|AAF99087.1| 644|Caenorhabditis elegans KRP85 protein.
Length = 644
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/67 (22%), Positives = 39/67 (58%)
Frame = +2
Query: 362 DEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQDLVPTCQRVMRLATNQAK 541
DE++ GD++ +++ + +E + E+KR+ +++ +S + T + V + N+A+
Sbjct: 359 DEENPGDDENQEEAWEAKMQEREVEMEKKRK-ILEERVNSAVNDEETHRLVKEMMENEAE 417
Query: 542 LQSFRNQ 562
L+ R++
Sbjct: 418 LKKARSE 424
>AC024801-1|AAK68513.1| 646|Caenorhabditis elegans Kinesin-like
protein protein 20 protein.
Length = 646
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/67 (22%), Positives = 39/67 (58%)
Frame = +2
Query: 362 DEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQDLVPTCQRVMRLATNQAK 541
DE++ GD++ +++ + +E + E+KR+ +++ +S + T + V + N+A+
Sbjct: 361 DEENPGDDENQEEAWEAKMQEREVEMEKKRK-ILEERVNSAVNDEETHRLVKEMMENEAE 419
Query: 542 LQSFRNQ 562
L+ R++
Sbjct: 420 LKKARSE 426
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +2
Query: 338 SSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRR 454
+ + + E + + KA + K R+REA +AE+KR+
Sbjct: 143 AKKEKQRQKELEERNRKAEEAASKRRKREAEVEAERKRK 181
>U58761-7|AAB00717.1| 481|Caenorhabditis elegans Hypothetical
protein C01F1.1 protein.
Length = 481
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +2
Query: 323 IHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRR 454
I SS + + +DE + GD+ A + K++++ A E+++R
Sbjct: 211 IKDEASSDDSDGDDEGEGGDDGKKAKNKKKKKKNAKPAKEKRQR 254
>AL117204-29|CAB55138.1| 1097|Caenorhabditis elegans Hypothetical
protein Y116A8C.36 protein.
Length = 1097
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +2
Query: 329 QTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKK 469
+ P S ED DN + + ERRR + EQ+RR ++K
Sbjct: 280 EPPQKSPAPKTFEDKRQDNLSKGQAELERRRRVLEEEEQRRRAEVEK 326
>AC025724-10|AAG23372.2| 1073|Caenorhabditis elegans Hypothetical
protein Y67D8C.9 protein.
Length = 1073
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = +3
Query: 342 PQIKTQRMKMTVVTTRHLHSVSKREEGKLTHRQSRKEEMQLRK---AMIHSKTLC 497
P IK +RM++ + KREE K R S ++ +Q K M ++ T+C
Sbjct: 174 PNIKMERMRLRKDGKKFYAKTFKREESKKLGRISLRDPLQKGKYILEMTYNMTIC 228
>AC024843-12|AAF60833.3| 986|Caenorhabditis elegans Hypothetical
protein Y61A9LA.10 protein.
Length = 986
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +2
Query: 338 SSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDA-IKKGYDSLQDLVPTCQ 508
+ ++ +DE++ GD+ + + K+ EA +QKR +A IK D TC+
Sbjct: 494 NDDGEDMDDEEEDGDDDETGGNEKKEESEADKSRKQKRLEAKIKLKQRFNDDYDETCK 551
>Z50029-8|CAA90342.2| 668|Caenorhabditis elegans Hypothetical
protein ZC504.3 protein.
Length = 668
Score = 27.5 bits (58), Expect = 9.8
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +2
Query: 323 IHQTPSSSNQN-TEDEDDSGDNKASALSFKERRREAHTQAEQK-RRDAIKK 469
+ T S N+ ++DED D+K KE + E+ T+ EQK RDA+KK
Sbjct: 226 LENTIVSLNETLSDDEDKGPDDKYGKTPDKE-QWESMTENEQKLHRDAMKK 275
>L14331-8|AAA28100.1| 586|Caenorhabditis elegans C.elegans homeobox
protein 26 protein.
Length = 586
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/63 (20%), Positives = 30/63 (47%)
Frame = +2
Query: 302 SSGSIQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDS 481
SS S N + TPSSS+ +++ + + + E+ + + + +D +++ D
Sbjct: 82 SSSSTSNTNSTPSSSSTSSKKSTEGMTETETMTASIEQEKVIQNEESEAGKDGMEEHDDG 141
Query: 482 LQD 490
+ D
Sbjct: 142 MND 144
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,628,984
Number of Sequences: 27780
Number of extensions: 301145
Number of successful extensions: 1356
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1331
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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