Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0008
         (569 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    23   7.0  
AF043443-1|AAC05668.1|  232|Anopheles gambiae putative pupal-spe...    23   9.3  
AF043439-1|AAC05664.1|  239|Anopheles gambiae putative pupal-spe...    23   9.3  
AF043437-1|AAC05662.1|  239|Anopheles gambiae putative pupal-spe...    23   9.3  
AF043434-1|AAC05659.1|  232|Anopheles gambiae putative pupal-spe...    23   9.3  
AF043433-2|AAC05657.1|  239|Anopheles gambiae putative pupal-spe...    23   9.3  

>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 18/60 (30%), Positives = 31/60 (51%)
 Frame = +1

Query: 28  VVTQISATMSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLR 207
           +VT+++  +  G+D+LA  +EDV + L        E       T +++RR DGT    +R
Sbjct: 202 IVTEMAEVLITGIDMLA-KKEDVERGL----QRALERTAVAATTSLWERR-DGTQRARVR 255


>AF043443-1|AAC05668.1|  232|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 232

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 14/36 (38%), Positives = 14/36 (38%)
 Frame = +2

Query: 443 STHY*SFICQHSCDCFVQHRLPLRFVDIAIPCNTKS 550
           S H    I QHS     QH  P     IA P   KS
Sbjct: 48  SVHAAPAIYQHSAPAIYQHSAPAIVKTIAQPTIIKS 83


>AF043439-1|AAC05664.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 239

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 14/36 (38%), Positives = 14/36 (38%)
 Frame = +2

Query: 443 STHY*SFICQHSCDCFVQHRLPLRFVDIAIPCNTKS 550
           S H    I QHS     QH  P     IA P   KS
Sbjct: 48  SVHAAPAIYQHSAPAIYQHSAPAIVKTIAQPTIIKS 83


>AF043437-1|AAC05662.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 239

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 14/36 (38%), Positives = 14/36 (38%)
 Frame = +2

Query: 443 STHY*SFICQHSCDCFVQHRLPLRFVDIAIPCNTKS 550
           S H    I QHS     QH  P     IA P   KS
Sbjct: 48  SVHAAPAIYQHSAPAIYQHSAPAIVKTIAQPTIIKS 83


>AF043434-1|AAC05659.1|  232|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 232

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 14/36 (38%), Positives = 14/36 (38%)
 Frame = +2

Query: 443 STHY*SFICQHSCDCFVQHRLPLRFVDIAIPCNTKS 550
           S H    I QHS     QH  P     IA P   KS
Sbjct: 48  SVHAAPAIYQHSAPAIYQHSAPAIVKTIAQPTIIKS 83


>AF043433-2|AAC05657.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 239

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 14/36 (38%), Positives = 14/36 (38%)
 Frame = +2

Query: 443 STHY*SFICQHSCDCFVQHRLPLRFVDIAIPCNTKS 550
           S H    I QHS     QH  P     IA P   KS
Sbjct: 48  SVHAAPAIYQHSAPAIYQHSAPAIVKTIAQPTIIKS 83


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 671,142
Number of Sequences: 2352
Number of extensions: 16000
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53824896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)