Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0007
         (585 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY187043-1|AAO39757.1|  171|Anopheles gambiae putative antennal ...    25   1.8  
AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A...    24   3.2  
AJ970245-1|CAI96717.1|  134|Anopheles gambiae putative reverse t...    24   4.2  

>AY187043-1|AAO39757.1|  171|Anopheles gambiae putative antennal
           carrier protein AP-1 protein.
          Length = 171

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 15/48 (31%), Positives = 19/48 (39%)
 Frame = +2

Query: 350 NNNINCDHLLTDKSGRKITRNQKRKHDEINHVQKTYAEMDPTTAALEK 493
           N  I CD L       K    +    D++N VQ T   +DP   A  K
Sbjct: 52  NGTIICDTLKCPAESFKCVIVKNSTKDDVNKVQVTRECLDPAGKATAK 99


>AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A2
           protein.
          Length = 496

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +2

Query: 245 LLRNYVHYVGYDR 283
           LLRNY+HY  YD+
Sbjct: 217 LLRNYLHYSLYDQ 229


>AJ970245-1|CAI96717.1|  134|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 134

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = -3

Query: 169 CSPMSKGCSGTDSESSLSVLRHSGLGNSLFTIGFSNSL 56
           C+  S G +  D+E +   + H GL + L  + F + L
Sbjct: 62  CNRKSTGLALLDTEKAFDSIWHQGLLSKLIKLNFPSYL 99


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 639,765
Number of Sequences: 2352
Number of extensions: 12470
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55927431
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)