Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0007
(585 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g64610.1 68418.m08119 histone acetyltransferase, putative sim... 46 2e-05
At5g09740.1 68418.m01128 histone acetyltransferase, putative sim... 45 3e-05
At4g37280.1 68417.m05276 MRG family protein contains Pfam domain... 31 0.43
At1g67800.3 68414.m07738 copine-related low similarity to SP|Q99... 31 0.57
At1g67800.2 68414.m07739 copine-related low similarity to SP|Q99... 31 0.57
At1g67800.1 68414.m07737 copine-related low similarity to SP|Q99... 31 0.57
At4g09430.1 68417.m01553 disease resistance protein (TIR-NBS-LRR... 25 0.92
At1g58460.1 68414.m06650 expressed protein 29 2.3
At3g04990.1 68416.m00542 hypothetical protein 29 3.0
At2g31970.1 68415.m03906 DNA repair-recombination protein (RAD50... 29 3.0
At1g43660.1 68414.m05012 hypothetical protein 29 3.0
At5g01010.1 68418.m00001 expressed protein 28 4.0
At2g38650.1 68415.m04747 glycosyl transferase family 8 protein c... 28 4.0
At5g41750.2 68418.m05081 disease resistance protein (TIR-NBS-LRR... 27 9.2
At5g41750.1 68418.m05080 disease resistance protein (TIR-NBS-LRR... 27 9.2
At4g34100.1 68417.m04838 zinc finger (C3HC4-type RING finger) fa... 27 9.2
At3g55760.2 68416.m06196 expressed protein 27 9.2
At3g55760.1 68416.m06195 expressed protein 27 9.2
At1g73590.1 68414.m08519 auxin efflux carrier protein, putative ... 27 9.2
At1g35710.1 68414.m04439 leucine-rich repeat transmembrane prote... 27 9.2
>At5g64610.1 68418.m08119 histone acetyltransferase, putative
similar to histone acetyltransferase [Homo sapiens]
gi|8317213|gb|AAF72665
Length = 445
Score = 46.0 bits (104), Expect = 2e-05
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Frame = +2
Query: 257 YVHYVGYDRRLDEWVSRHRVMSDRFDVCEQSNNNINCDHLLTDK-SGRKITRNQKRKHDE 433
YVHY ++RRLDEW+ ++ D + D + DK + K+TR+QKRK DE
Sbjct: 97 YVHYTEFNRRLDEWIKLEQLDLDSVECA--------LDEKVEDKVTSLKMTRHQKRKIDE 148
Query: 434 INHVQKTYAEMDPTTAALEKXHEAILKLNT*TGIQIWK 547
HV+ + E+D AA + HE K+ I++ K
Sbjct: 149 -THVE-GHEELD---AASLREHEEFTKVKNIATIELGK 181
Score = 31.5 bits (68), Expect = 0.43
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +1
Query: 505 YSKVKYIDRDTNLENMEIDTWYFSPYP 585
++KVK I L EI+TWYFSP+P
Sbjct: 168 FTKVKNI-ATIELGKYEIETWYFSPFP 193
>At5g09740.1 68418.m01128 histone acetyltransferase, putative
similar to histone acetyltransferase [Homo sapiens]
gi|8317213|gb|AAF72665
Length = 445
Score = 45.2 bits (102), Expect = 3e-05
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Frame = +2
Query: 257 YVHYVGYDRRLDEWVSRHRVMSDRFDVCEQSNNNINC--DHLLTDK-SGRKITRNQKRKH 427
YVHY ++RRLDEW D+ D+ +++ C D + DK + K+TR+QKRK
Sbjct: 97 YVHYTEFNRRLDEW-----TQLDQLDL-----DSVECAVDEKVEDKVTSLKMTRHQKRKI 146
Query: 428 DEINHVQKTYAEMDPTTAALEKXHEAILKLNT*TGIQIWK 547
DE H++ + E+D AA + HE K+ + I++ K
Sbjct: 147 DE-THIE-GHEELD---AASLREHEEFTKVKNISTIELGK 181
Score = 31.9 bits (69), Expect = 0.32
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +1
Query: 505 YSKVKYIDRDTNLENMEIDTWYFSPYP 585
++KVK I L EI+TWYFSP+P
Sbjct: 168 FTKVKNIST-IELGKYEIETWYFSPFP 193
>At4g37280.1 68417.m05276 MRG family protein contains Pfam domain
PF05712: MRG
Length = 320
Score = 31.5 bits (68), Expect = 0.43
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +2
Query: 257 YVHYVGYDRRLDEWVSRHRVM 319
+VHY+G+++ DEWVS R++
Sbjct: 61 FVHYLGWNKNWDEWVSADRLL 81
>At1g67800.3 68414.m07738 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 433
Score = 31.1 bits (67), Expect = 0.57
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Frame = +2
Query: 272 GYDRRLDEWVSRHRVMSDRFDVCE--QSNNNINCDHLLTDKSGRKITRNQKRKHDEINHV 445
G RR + VS S +D Q+ N+ + + + SGR+ +N +RK+ + +
Sbjct: 14 GSGRRYERSVSGSSSYSSAWDQSSYYQTPNHPSASPVSSYNSGRQTPKNLERKY---SRI 70
Query: 446 QKTYAEMDPTTAALEKXHEAILKLNT*TGIQIWK 547
Y +D TAAL H + N GI + K
Sbjct: 71 ADNYRSIDEVTAALS--HAGLESSNLIVGIDVTK 102
>At1g67800.2 68414.m07739 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 453
Score = 31.1 bits (67), Expect = 0.57
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Frame = +2
Query: 272 GYDRRLDEWVSRHRVMSDRFDVCE--QSNNNINCDHLLTDKSGRKITRNQKRKHDEINHV 445
G RR + VS S +D Q+ N+ + + + SGR+ +N +RK+ + +
Sbjct: 34 GSGRRYERSVSGSSSYSSAWDQSSYYQTPNHPSASPVSSYNSGRQTPKNLERKY---SRI 90
Query: 446 QKTYAEMDPTTAALEKXHEAILKLNT*TGIQIWK 547
Y +D TAAL H + N GI + K
Sbjct: 91 ADNYRSIDEVTAALS--HAGLESSNLIVGIDVTK 122
>At1g67800.1 68414.m07737 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 433
Score = 31.1 bits (67), Expect = 0.57
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Frame = +2
Query: 272 GYDRRLDEWVSRHRVMSDRFDVCE--QSNNNINCDHLLTDKSGRKITRNQKRKHDEINHV 445
G RR + VS S +D Q+ N+ + + + SGR+ +N +RK+ + +
Sbjct: 14 GSGRRYERSVSGSSSYSSAWDQSSYYQTPNHPSASPVSSYNSGRQTPKNLERKY---SRI 70
Query: 446 QKTYAEMDPTTAALEKXHEAILKLNT*TGIQIWK 547
Y +D TAAL H + N GI + K
Sbjct: 71 ADNYRSIDEVTAALS--HAGLESSNLIVGIDVTK 102
>At4g09430.1 68417.m01553 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1039
Score = 25.0 bits (52), Expect(2) = 0.92
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +3
Query: 156 DIGEHYLVRRSDESWHPAEIIQSRYSTAESCY-EIMSIMSDMIED 287
DI LV SW ++ +Y T+ C E+ IM I+D
Sbjct: 56 DIISEKLVNAIQTSWFAVVVLSEKYVTSSWCLEELRHIMELSIQD 100
Score = 23.8 bits (49), Expect(2) = 0.92
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +3
Query: 9 LRDTIVVVGIIMAKGDKELEK-PIVNNELPN 98
L +V VGI K DKELE+ I++ +L N
Sbjct: 34 LHKALVDVGIRTFKDDKELEEGDIISEKLVN 64
>At1g58460.1 68414.m06650 expressed protein
Length = 144
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = +2
Query: 362 NCDHLLTDKSGRKITRNQKRKHDEINHVQKTYAEMDPTTAALEKXHEAILK 514
N + KS K +N+K+ H+E + ++ + D T ++LEK + L+
Sbjct: 72 NTQYWCKSKSKNK-NKNKKKVHEEQGYSERFNSSFDDTASSLEKVNSGFLQ 121
>At3g04990.1 68416.m00542 hypothetical protein
Length = 227
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +2
Query: 377 LTDKSGRKITRNQKRKHDEINHVQKTYAEMDPTTAALEK 493
L D ++ KR++ E HVQK EM+ TA +K
Sbjct: 104 LKDNQLVQVMAELKRRYSEARHVQKRKREMEDETATKKK 142
>At2g31970.1 68415.m03906 DNA repair-recombination protein (RAD50)
identical to DNA repair-recombination protein GI:7110148
from [Arabidopsis thaliana]
Length = 1316
Score = 28.7 bits (61), Expect = 3.0
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
Frame = +2
Query: 254 NYVHYVGYDRRLDEWVSRHRVMSDRFDVCEQSNNNINCDHLLTDKSGRKITRNQKRKHDE 433
N H + RLD+ + R+ + CE N + L +K + ++Q R++ E
Sbjct: 976 NEYHDLKKGERLDDIQEKQRLSDSQLQSCEARKNEL-AGELNRNKDLMR-NQDQLRRNIE 1033
Query: 434 IN-HVQKTYAEMDPTTAALEKXHEAILKL 517
N + + T A+++ T +E E IL +
Sbjct: 1034 DNLNYRTTKAKVEELTREIESLEEQILNI 1062
>At1g43660.1 68414.m05012 hypothetical protein
Length = 94
Score = 28.7 bits (61), Expect = 3.0
Identities = 22/90 (24%), Positives = 35/90 (38%)
Frame = +2
Query: 248 LRNYVHYVGYDRRLDEWVSRHRVMSDRFDVCEQSNNNINCDHLLTDKSGRKITRNQKRKH 427
L++Y D E +R R + VCE NNN++ T K RK+ +H
Sbjct: 4 LKSYDKVAHEDLLKTEPRTRCRAFFNSNAVCEDVNNNLSKSFNKTTKKSRKMPIMDMLEH 63
Query: 428 DEINHVQKTYAEMDPTTAALEKXHEAILKL 517
+Q+ + + K I+KL
Sbjct: 64 IRRQTMQRVLKRYEKASKCHSKFAPRIMKL 93
>At5g01010.1 68418.m00001 expressed protein
Length = 409
Score = 28.3 bits (60), Expect = 4.0
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 508 NSFMXLFKRGGRWIHFGV 455
NS+ FK+ GR++HFGV
Sbjct: 387 NSYSTFFKKVGRYLHFGV 404
>At2g38650.1 68415.m04747 glycosyl transferase family 8 protein
contains Pfam profile: PF01501 glycosyl transferase
family 8
Length = 619
Score = 28.3 bits (60), Expect = 4.0
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = -2
Query: 569 YQVSISIFSKFVS-LSMYLTLE*LHXPFQARRSLDPFRRKFSAHGLFRHVYVFDSLLFS 396
YQ+++ K + LSM LT+E H F++ DP KFS L V + D++L S
Sbjct: 284 YQLAVQTMPKSLHCLSMRLTVE--H--FKSDSLEDPISEKFSDPSLLHFVIISDNILAS 338
>At5g41750.2 68418.m05081 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1068
Score = 27.1 bits (57), Expect = 9.2
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +2
Query: 278 DRRLDEWVSRHRVMSDRFDVCEQSNNNINCDHLLTDKSGRKITRNQ 415
DR+LD V+ +++DR V ++ ++ H L K GR+I Q
Sbjct: 455 DRKLDV-VNGFNILADRSLVRISTDGHVVMHHYLLQKLGRRIVHEQ 499
>At5g41750.1 68418.m05080 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1068
Score = 27.1 bits (57), Expect = 9.2
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +2
Query: 278 DRRLDEWVSRHRVMSDRFDVCEQSNNNINCDHLLTDKSGRKITRNQ 415
DR+LD V+ +++DR V ++ ++ H L K GR+I Q
Sbjct: 455 DRKLDV-VNGFNILADRSLVRISTDGHVVMHHYLLQKLGRRIVHEQ 499
>At4g34100.1 68417.m04838 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 1092
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = -1
Query: 576 TKIPSIDFHIFQICIPVYVFNFR 508
T+IP+ D +FQICIP + +FR
Sbjct: 655 TEIPA-DMLLFQICIPFIIEHFR 676
>At3g55760.2 68416.m06196 expressed protein
Length = 578
Score = 27.1 bits (57), Expect = 9.2
Identities = 23/100 (23%), Positives = 43/100 (43%), Gaps = 15/100 (15%)
Frame = +3
Query: 63 LEKPIVNNELPNPECRSTDNEDSESVPEQPLDIGEHYL-----------VRRSDESWHPA 209
+EKP LPNP + DS S+P + + E + VR+ E+ +
Sbjct: 218 VEKPAEFPTLPNPVLEKDKSADSLSIPYESMLSSERHSFTIPPFESLIEVRKEAETKPSS 277
Query: 210 EIIQSRYS----TAESCYEIMSIMSDMIEDSTNGCPATGL 317
E + + + ++ + E+ ++ + E ST+G GL
Sbjct: 278 ETLSTEHDLDLISSANAEEVARVLDSLDESSTHGVSEDGL 317
>At3g55760.1 68416.m06195 expressed protein
Length = 578
Score = 27.1 bits (57), Expect = 9.2
Identities = 23/100 (23%), Positives = 43/100 (43%), Gaps = 15/100 (15%)
Frame = +3
Query: 63 LEKPIVNNELPNPECRSTDNEDSESVPEQPLDIGEHYL-----------VRRSDESWHPA 209
+EKP LPNP + DS S+P + + E + VR+ E+ +
Sbjct: 218 VEKPAEFPTLPNPVLEKDKSADSLSIPYESMLSSERHSFTIPPFESLIEVRKEAETKPSS 277
Query: 210 EIIQSRYS----TAESCYEIMSIMSDMIEDSTNGCPATGL 317
E + + + ++ + E+ ++ + E ST+G GL
Sbjct: 278 ETLSTEHDLDLISSANAEEVARVLDSLDESSTHGVSEDGL 317
>At1g73590.1 68414.m08519 auxin efflux carrier protein, putative
(PIN1) identical to putative auxin efflux carrier
protein; AtPIN1 [Arabidopsis thaliana] GI:4151319;
contains Pfam profile PF03547: Auxin Efflux Carrier
Length = 622
Score = 27.1 bits (57), Expect = 9.2
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = -3
Query: 124 SLSVLRHSGLGNSLFTIGFSNSLSP 50
S+S+L +GLG ++F++G +L+P
Sbjct: 506 SISILSDAGLGMAMFSLGLFMALNP 530
>At1g35710.1 68414.m04439 leucine-rich repeat transmembrane protein
kinase, putative similar to many predicted protein
kinases
Length = 1120
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 3 AVLRDTIVVVGIIMAKGDKELEKPIVNNELPN 98
A L+DTI+ V + D+E+ KP+V E N
Sbjct: 868 ANLQDTIIAVKRLHDTIDEEISKPVVKQEFLN 899
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,054,405
Number of Sequences: 28952
Number of extensions: 264584
Number of successful extensions: 820
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 820
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1151426952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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