Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0004
(543 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016430-5|AAB65373.1| 581|Caenorhabditis elegans Hypothetical ... 50 1e-06
DQ338465-1|ABC67522.1| 690|Caenorhabditis elegans KEL-8 protein. 48 4e-06
AF067946-5|AAC17684.4| 690|Caenorhabditis elegans Hypothetical ... 48 4e-06
AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein. 44 7e-05
AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein. 44 7e-05
AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1 suppres... 44 7e-05
L14433-2|AAA27978.1| 410|Caenorhabditis elegans Hypothetical pr... 43 1e-04
Z79759-4|CAB02139.2| 395|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U67737-1|AAC63596.1| 395|Caenorhabditis elegans MEL-26 protein. 43 2e-04
AF067219-16|AAC17022.1| 531|Caenorhabditis elegans Hypothetical... 42 4e-04
U13072-5|AAK31400.1| 390|Caenorhabditis elegans Hypothetical pr... 40 9e-04
U13072-4|AAL00851.1| 397|Caenorhabditis elegans Hypothetical pr... 40 9e-04
Z82059-11|CAC42351.2| 591|Caenorhabditis elegans Hypothetical p... 40 0.002
Z69902-7|CAA93769.1| 618|Caenorhabditis elegans Hypothetical pr... 39 0.003
AB023424-1|BAA82800.1| 618|Caenorhabditis elegans kel-1 protein. 39 0.003
Z82059-10|CAB04878.2| 589|Caenorhabditis elegans Hypothetical p... 38 0.004
Z30662-10|CAI58651.1| 409|Caenorhabditis elegans Hypothetical p... 36 0.025
Z30662-9|CAA83138.2| 451|Caenorhabditis elegans Hypothetical pr... 36 0.025
AF101316-1|AAC69231.1| 684|Caenorhabditis elegans Hypothetical ... 34 0.076
AF077540-6|AAC26309.1| 315|Caenorhabditis elegans Hypothetical ... 32 0.23
AF040643-14|AAB94956.1| 299|Caenorhabditis elegans Hypothetical... 31 0.54
AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical ... 31 0.54
Z68216-4|CAA92463.2| 565|Caenorhabditis elegans Hypothetical pr... 31 0.71
Z77660-9|CAB01179.1| 602|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z68316-5|CAL49438.1| 326|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical pr... 29 2.9
AF016658-2|AAB66041.2| 271|Caenorhabditis elegans Hypothetical ... 27 6.6
AF016658-1|ABA03120.1| 306|Caenorhabditis elegans Hypothetical ... 27 6.6
AL032627-1|CAB63352.2| 444|Caenorhabditis elegans Hypothetical ... 27 8.7
>AF016430-5|AAB65373.1| 581|Caenorhabditis elegans Hypothetical
protein C05C8.6 protein.
Length = 581
Score = 49.6 bits (113), Expect = 1e-06
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Frame = +3
Query: 249 DELVEILEALIKGETYVDCTLVVDDQVTFKAHRVVLAANSPYFQSIL-ADVPMDHCSIL- 422
DEL + + + + D TLV+DD F AHR++LA S +F+++L H ++
Sbjct: 48 DELSQSFDEIFTSTDHSDVTLVLDDGTEFAAHRLILAVRSSFFRAMLYTGFQESHQQLVT 107
Query: 423 FPGVKDFEMRALLEYMYTGEVN 488
RA+L YMYT +++
Sbjct: 108 LQETNSVAFRAVLRYMYTSKID 129
>DQ338465-1|ABC67522.1| 690|Caenorhabditis elegans KEL-8 protein.
Length = 690
Score = 48.0 bits (109), Expect = 4e-06
Identities = 25/95 (26%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Frame = +3
Query: 228 FKMESSQDELVEILEALIKGETYVDCTLVVDDQVTFKAHRVVLAANSPYFQSILAD--VP 401
++ + +++E + L + E D L+V V +AHR +LAA SPYF+++ + V
Sbjct: 88 YENQEQSSKIMEQMRILRQTEELCDVELLVAGSV-IRAHRYILAAASPYFKAMFTNGMVE 146
Query: 402 MDHCSILFPGVKDFEMRALLEYMYTGEVNVTQAHI 506
M +I + + +R +++Y+YT ++ +T ++
Sbjct: 147 MKKLTIELQDIPEESVRIIVDYIYTDKIAITMNNV 181
>AF067946-5|AAC17684.4| 690|Caenorhabditis elegans Hypothetical
protein W02G9.2 protein.
Length = 690
Score = 48.0 bits (109), Expect = 4e-06
Identities = 25/95 (26%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Frame = +3
Query: 228 FKMESSQDELVEILEALIKGETYVDCTLVVDDQVTFKAHRVVLAANSPYFQSILAD--VP 401
++ + +++E + L + E D L+V V +AHR +LAA SPYF+++ + V
Sbjct: 88 YENQEQSSKIMEQMRILRQTEELCDVELLVAGSV-IRAHRYILAAASPYFKAMFTNGMVE 146
Query: 402 MDHCSILFPGVKDFEMRALLEYMYTGEVNVTQAHI 506
M +I + + +R +++Y+YT ++ +T ++
Sbjct: 147 MKKLTIELQDIPEESVRIIVDYIYTDKIAITMNNV 181
>AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 44.0 bits (99), Expect = 7e-05
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Frame = +3
Query: 255 LVEILEALIKGETYVDCTLVVDDQVTFKAHRVVLAANSPYFQSIL--ADVPMDHCSILFP 428
L + L+ K + D +VV ++ +F AHR +LAA+SPYF +I + + +I
Sbjct: 28 LFQRLQYQRKTGRFCDVEIVVQNK-SFAAHRNILAAHSPYFDAIFKYCKITKEQLTINSK 86
Query: 429 GVKDFEMRALLEYMYTGEVNVTQAHIPE**KSLNN 533
+ FE+ L YMY+G V + ++ + E + NN
Sbjct: 87 SPQVFEL--FLNYMYSGTVIIDRSSVSELLRFANN 119
>AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 44.0 bits (99), Expect = 7e-05
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Frame = +3
Query: 255 LVEILEALIKGETYVDCTLVVDDQVTFKAHRVVLAANSPYFQSIL--ADVPMDHCSILFP 428
L + L+ K + D +VV ++ +F AHR +LAA+SPYF +I + + +I
Sbjct: 28 LFQRLQYQRKTGRFCDVEIVVQNK-SFAAHRNILAAHSPYFDAIFKYCKITKEQLTINSK 86
Query: 429 GVKDFEMRALLEYMYTGEVNVTQAHIPE**KSLNN 533
+ FE+ L YMY+G V + ++ + E + NN
Sbjct: 87 SPQVFEL--FLNYMYSGTVIIDRSSVSELLRFANN 119
>AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1
suppressor/dio uptake defective/raf enhancer protein 1
protein.
Length = 909
Score = 44.0 bits (99), Expect = 7e-05
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Frame = +3
Query: 255 LVEILEALIKGETYVDCTLVVDDQVTFKAHRVVLAANSPYFQSIL--ADVPMDHCSILFP 428
L + L+ K + D +VV ++ +F AHR +LAA+SPYF +I + + +I
Sbjct: 28 LFQRLQYQRKTGRFCDVEIVVQNK-SFAAHRNILAAHSPYFDAIFKYCKITKEQLTINSK 86
Query: 429 GVKDFEMRALLEYMYTGEVNVTQAHIPE**KSLNN 533
+ FE+ L YMY+G V + ++ + E + NN
Sbjct: 87 SPQVFEL--FLNYMYSGTVIIDRSSVSELLRFANN 119
>L14433-2|AAA27978.1| 410|Caenorhabditis elegans Hypothetical
protein C50C3.8 protein.
Length = 410
Score = 43.2 bits (97), Expect = 1e-04
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
Frame = +3
Query: 246 QDELVEIL-----EALIKGETYVDCTLVVDDQVTFKAHRVVLAANSPYFQSILADVPMDH 410
Q+E+ E++ ++ + E + DC + V ++ KAHR +L NSP F+S+ + M
Sbjct: 197 QEEMPEVIVRANNRSMWEDELFTDCVIHVGNK-HIKAHRCILGQNSPVFKSMFSSPNMIE 255
Query: 411 C---SILFPGVKDFEMRALLEYMYTG 479
I K +RA++E+MYTG
Sbjct: 256 AQKGEIHIEDAKYDSVRAMVEFMYTG 281
>Z79759-4|CAB02139.2| 395|Caenorhabditis elegans Hypothetical
protein ZK858.4 protein.
Length = 395
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Frame = +3
Query: 228 FKMESSQDELVEILEALIKGETYVDCTLVVDDQVTFKAHRVVLAANSPYFQSILADVPMD 407
F+ +S+ +L+E + L E D + V+ ++ +AH+ VLAA SP F ++L D
Sbjct: 178 FEPTNSEQQLIEDYQRLFSQELLCDFAINVNGKI-IRAHKAVLAARSPVFNAMLTHQDTD 236
Query: 408 HCSILFPGVKDFEMRALLE---YMYTGEVN 488
+ D + + E Y+Y G N
Sbjct: 237 EAKSSMMYINDMDYDVIYEMVYYIYCGRCN 266
>U67737-1|AAC63596.1| 395|Caenorhabditis elegans MEL-26 protein.
Length = 395
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Frame = +3
Query: 228 FKMESSQDELVEILEALIKGETYVDCTLVVDDQVTFKAHRVVLAANSPYFQSILADVPMD 407
F+ +S+ +L+E + L E D + V+ ++ +AH+ VLAA SP F ++L D
Sbjct: 178 FEPTNSEQQLIEDYQRLFSQELLCDFAINVNGKI-IRAHKAVLAARSPVFNAMLTHQDTD 236
Query: 408 HCSILFPGVKDFEMRALLE---YMYTGEVN 488
+ D + + E Y+Y G N
Sbjct: 237 EAKSSMMYINDMDYDVIYEMVYYIYCGRCN 266
>AF067219-16|AAC17022.1| 531|Caenorhabditis elegans Hypothetical
protein R12E2.1 protein.
Length = 531
Score = 41.5 bits (93), Expect = 4e-04
Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Frame = +3
Query: 228 FKMESSQDELVEILEALIKGETYVDCTLVVDDQVTFKAHRVVLAANSPYFQSILADVPMD 407
+K + +++ L L + D TL+ + AHRVVL+A SPYF S+ M
Sbjct: 33 YKNSHFANSVLQQLGGLKNRDVLCDVTLICGWK-RINAHRVVLSACSPYFLSMFTS-QMA 90
Query: 408 HCSILFPGVKDFE---MRALLEYMYTGEVNVTQAHIPE 512
C + +++ E + AL+E+ YTG + + +++ +
Sbjct: 91 ECYMREINMEEIEPPTLEALIEFCYTGAIAIDDSNVQD 128
>U13072-5|AAK31400.1| 390|Caenorhabditis elegans Hypothetical
protein C07D10.2a protein.
Length = 390
Score = 40.3 bits (90), Expect = 9e-04
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Frame = +3
Query: 252 ELVEILEALIKGETYVDCTLVVDDQVTFKAHRVVLAANSPYFQSILA--DVPMDHCSILF 425
++ + LE L + + D TLVV+++ KAH+ +LAA SP F +++ + +
Sbjct: 188 DVTKDLENLYRSGKHADFTLVVEER-ELKAHKAILAARSPVFAAMMEPHTAEAQNSRAIL 246
Query: 426 PGVKDFE-MRALLEYMYTG 479
+ D+E ++A+L Y+YTG
Sbjct: 247 RDI-DYEVVQAILYYIYTG 264
>U13072-4|AAL00851.1| 397|Caenorhabditis elegans Hypothetical
protein C07D10.2b protein.
Length = 397
Score = 40.3 bits (90), Expect = 9e-04
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Frame = +3
Query: 252 ELVEILEALIKGETYVDCTLVVDDQVTFKAHRVVLAANSPYFQSILA--DVPMDHCSILF 425
++ + LE L + + D TLVV+++ KAH+ +LAA SP F +++ + +
Sbjct: 195 DVTKDLENLYRSGKHADFTLVVEER-ELKAHKAILAARSPVFAAMMEPHTAEAQNSRAIL 253
Query: 426 PGVKDFE-MRALLEYMYTG 479
+ D+E ++A+L Y+YTG
Sbjct: 254 RDI-DYEVVQAILYYIYTG 271
>Z82059-11|CAC42351.2| 591|Caenorhabditis elegans Hypothetical
protein T27E9.4b protein.
Length = 591
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Frame = +3
Query: 300 DCTLVVDDQVTFKAHRVVLAANSPYFQSI----LADVPMDHCSILFPGVKDFEMRALLEY 467
D L+V+++ AH+V+LAA PYF+ + L + M +I + + ALL +
Sbjct: 52 DVALLVENR-KLSAHKVILAATIPYFRGMFTLDLMEANMKEINIEDSDMNYETVDALLSF 110
Query: 468 MYTGEVNVTQAHI 506
YTGE+ +T +++
Sbjct: 111 AYTGELRITTSNV 123
>Z69902-7|CAA93769.1| 618|Caenorhabditis elegans Hypothetical
protein C47D12.7 protein.
Length = 618
Score = 38.7 bits (86), Expect = 0.003
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Frame = +3
Query: 246 QDELVEI-LEAL-IKGETYVDCTLVVDDQVTFKAHRVVLAANSPYFQSILADVPMDHCSI 419
Q EL ++ LEA I+G + D + D AHRV+L+A+S YF+++ +
Sbjct: 52 QQELCDVVLEAYPIQGTSSED-GMSDDVHQHIHAHRVILSASSSYFRAMFTGGLRESTQR 110
Query: 420 LFPGVKDFEMRA---LLEYMYTGEVNVTQAHI 506
+ P +K+ ++ L++YMYTG + + + ++
Sbjct: 111 IIP-IKEVDVEVLSQLIDYMYTGRMRIDEQNV 141
>AB023424-1|BAA82800.1| 618|Caenorhabditis elegans kel-1 protein.
Length = 618
Score = 38.7 bits (86), Expect = 0.003
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Frame = +3
Query: 246 QDELVEI-LEAL-IKGETYVDCTLVVDDQVTFKAHRVVLAANSPYFQSILADVPMDHCSI 419
Q EL ++ LEA I+G + D + D AHRV+L+A+S YF+++ +
Sbjct: 52 QQELCDVVLEAYPIQGTSSED-GMSDDVHQHIHAHRVILSASSSYFRAMFTGGLRESTQR 110
Query: 420 LFPGVKDFEMRA---LLEYMYTGEVNVTQAHI 506
+ P +K+ ++ L++YMYTG + + + ++
Sbjct: 111 IIP-IKEVDVEVLSQLIDYMYTGRMRIDEQNV 141
>Z82059-10|CAB04878.2| 589|Caenorhabditis elegans Hypothetical
protein T27E9.4a protein.
Length = 589
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/72 (29%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Frame = +3
Query: 300 DCTLVVDDQVTFKAHRVVLAANSPYFQSILADVPMDHCSILFPGVKDFE---MRALLEYM 470
D L+V+++ AH+V+LAA PYF+ + + + ++ ++D + ALL +
Sbjct: 52 DVALLVENR-KLSAHKVILAATIPYFRGMFT-LDLMEANMKEINIEDMNYETVDALLSFA 109
Query: 471 YTGEVNVTQAHI 506
YTGE+ +T +++
Sbjct: 110 YTGELRITTSNV 121
>Z30662-10|CAI58651.1| 409|Caenorhabditis elegans Hypothetical
protein T16H12.5b protein.
Length = 409
Score = 35.5 bits (78), Expect = 0.025
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Frame = +3
Query: 225 LFKMESSQDELVEILEALIKGETYVDCTLVVDDQV-----TFKAHRVVLAANSPYFQSIL 389
LFK+ + L + + L + + D TLV + TF H+ +LAA S F S +
Sbjct: 201 LFKVPPCR--LADDMYGLFDNKQFSDFTLVCKSDLGSPTQTFHIHKAILAARSRVF-SAM 257
Query: 390 ADVPMDHCSILFPGVKDFE---MRALLEYMYTGE 482
+ M V D E MR LL YMYTG+
Sbjct: 258 FEHHMQESDTNMTTVDDIEPEVMRELLVYMYTGQ 291
>Z30662-9|CAA83138.2| 451|Caenorhabditis elegans Hypothetical
protein T16H12.5a protein.
Length = 451
Score = 35.5 bits (78), Expect = 0.025
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Frame = +3
Query: 225 LFKMESSQDELVEILEALIKGETYVDCTLVVDDQV-----TFKAHRVVLAANSPYFQSIL 389
LFK+ + L + + L + + D TLV + TF H+ +LAA S F S +
Sbjct: 243 LFKVPPCR--LADDMYGLFDNKQFSDFTLVCKSDLGSPTQTFHIHKAILAARSRVF-SAM 299
Query: 390 ADVPMDHCSILFPGVKDFE---MRALLEYMYTGE 482
+ M V D E MR LL YMYTG+
Sbjct: 300 FEHHMQESDTNMTTVDDIEPEVMRELLVYMYTGQ 333
>AF101316-1|AAC69231.1| 684|Caenorhabditis elegans Hypothetical
protein F52F10.3 protein.
Length = 684
Score = 33.9 bits (74), Expect = 0.076
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = -1
Query: 468 YIQG--ALSFRNP*PPETEYCNDPWAHRLIWIGN 373
Y+QG A SF N P+ E C D W H L++I N
Sbjct: 348 YVQGPFAASFSNVQFPQVEACKDYWWHNLLYINN 381
>AF077540-6|AAC26309.1| 315|Caenorhabditis elegans Hypothetical
protein T07H3.2 protein.
Length = 315
Score = 32.3 bits (70), Expect = 0.23
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +3
Query: 288 ETYVDCTLVVDDQVTFKAHRVVLAANSPYFQSILADVP-MDHCSI-LFPGVKDFEMRALL 461
E Y D LV Q F + +L +SPYF+ +L++ P +D + L GV + + L
Sbjct: 15 EPYSDVVLVAS-QEWFHVSKAILCDHSPYFRCLLSNFPRIDEKPVHLLKGVNPADFQKFL 73
Query: 462 EYMY 473
E ++
Sbjct: 74 EVLH 77
>AF040643-14|AAB94956.1| 299|Caenorhabditis elegans Hypothetical
protein F14D2.1 protein.
Length = 299
Score = 31.1 bits (67), Expect = 0.54
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = +3
Query: 294 YVDCTLVVDDQVTFKAHRVVLAANSPYFQSILADVPMDHCSILFPGVKDFEMRALLEYMY 473
+ D L+V Q F + LA +SPYF+++L + +D I P V + + LE +Y
Sbjct: 145 FADTVLIVRGQ-RFYVLKQHLALHSPYFKNLLKECTLD-SEIQLPDVDTDDFQKYLEILY 202
>AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical
protein F14D2.15 protein.
Length = 299
Score = 31.1 bits (67), Expect = 0.54
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = +3
Query: 294 YVDCTLVVDDQVTFKAHRVVLAANSPYFQSILADVPMDHCSILFPGVKDFEMRALLEYMY 473
+ D L+V Q F + LA +SPYF+++L + +D I P V + + LE +Y
Sbjct: 145 FADTVLIVRGQ-RFYVLKQHLALHSPYFKNLLKECTLD-SEIQLPDVDTDDFQKYLEILY 202
>Z68216-4|CAA92463.2| 565|Caenorhabditis elegans Hypothetical
protein F27C8.5 protein.
Length = 565
Score = 30.7 bits (66), Expect = 0.71
Identities = 17/89 (19%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Frame = +3
Query: 249 DELVEILEALIKGETYVDCTLVVDDQVTFK-AHRVVLAANSPYFQSILADVPMDHCSILF 425
+ + +IL+A + + C + + + F H VV+ A+S F + +
Sbjct: 17 ERIAKILQAKRRAGDFSTCDVKIQLKTGFDMVHSVVICAHSDVFSETFDNQRAPYQPFNM 76
Query: 426 PGVKDFEMRALLEYMYTGEVNVTQAHIPE 512
+R + ++MY+GE+++ + I +
Sbjct: 77 TDFDPDSVRRVFDWMYSGEIDIPETTIAD 105
>Z77660-9|CAB01179.1| 602|Caenorhabditis elegans Hypothetical
protein F38H4.7 protein.
Length = 602
Score = 29.9 bits (64), Expect = 1.2
Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 8/97 (8%)
Frame = +3
Query: 225 LFKMESSQDELVEILEALIKGETYVDCTLVV---DDQVTFKAHRVVLAANSPYFQSILAD 395
L ++ + L E +E + ET D VV D + AH+ VL+ S F ++
Sbjct: 165 LLGWQADKKTLRERIEHMYCNETLADVFFVVGIDDSRQRIPAHKFVLSIGSVVFDAMFNG 224
Query: 396 --VPM---DHCSILFPGVKDFEMRALLEYMYTGEVNV 491
P + I P V+ ALL+++Y+ EV +
Sbjct: 225 GLTPKNTEEALEIELPDVEPSAFLALLKFLYSDEVKI 261
>Z68316-5|CAL49438.1| 326|Caenorhabditis elegans Hypothetical
protein K08E4.7 protein.
Length = 326
Score = 29.5 bits (63), Expect = 1.6
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +3
Query: 219 NFLFKMESSQDELVEILEALIKGETY-VDCTLVVDDQVTFKAHRVVLAANSPYFQSILAD 395
NF+ +S Q + I ++ + + +DC + +++ KA V LA + + +
Sbjct: 219 NFIHHTDS-QINIETIENMMVLADLFLIDCLMCCCEKILIKADSVNLAKKLIWAERFALN 277
Query: 396 VPMDHCSILFPGVKDF 443
MDHC F ++DF
Sbjct: 278 ELMDHCLDGFKKMQDF 293
>Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical
protein R03E1.3 protein.
Length = 502
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = -2
Query: 479 TRVHIFKERSHFEILNPRKQNTAMIHGHI 393
T+V++F +H E ++ +Q TA++HGHI
Sbjct: 52 TQVNVFLSIAHVEKVDEHEQ-TALVHGHI 79
>AF016658-2|AAB66041.2| 271|Caenorhabditis elegans Hypothetical
protein B0047.1a protein.
Length = 271
Score = 27.5 bits (58), Expect = 6.6
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 309 LVVDDQVT-FKAHRVVLAANSPYFQSILADVPMDHCSILFPGVKDFEMRALLEYMYTGEV 485
+V+D + T F R +LA +S YF ++L D +I DF+ LLE +Y GE
Sbjct: 156 VVIDVKGTKFYVLRKLLAFHSTYFYTLLGDSTESKVTISDINADDFQ--TLLEVLY-GES 212
Query: 486 NVTQAHI 506
+ +++
Sbjct: 213 AINDSNV 219
>AF016658-1|ABA03120.1| 306|Caenorhabditis elegans Hypothetical
protein B0047.1b protein.
Length = 306
Score = 27.5 bits (58), Expect = 6.6
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 309 LVVDDQVT-FKAHRVVLAANSPYFQSILADVPMDHCSILFPGVKDFEMRALLEYMYTGEV 485
+V+D + T F R +LA +S YF ++L D +I DF+ LLE +Y GE
Sbjct: 156 VVIDVKGTKFYVLRKLLAFHSTYFYTLLGDSTESKVTISDINADDFQ--TLLEVLY-GES 212
Query: 486 NVTQAHI 506
+ +++
Sbjct: 213 AINDSNV 219
>AL032627-1|CAB63352.2| 444|Caenorhabditis elegans Hypothetical
protein Y41C4A.1 protein.
Length = 444
Score = 27.1 bits (57), Expect = 8.7
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +3
Query: 366 SPYFQSILADVPMDHCSILFPGVKDFEMRALLEYMYTGEVNVT 494
+PYF S+ D P D +L VK FE R+ Y + NVT
Sbjct: 65 APYFVSVAKDTPKD---VLQMSVK-FEQRSRWSYKFNIVYNVT 103
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,003,090
Number of Sequences: 27780
Number of extensions: 264886
Number of successful extensions: 624
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 615
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -