Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0003
         (555 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457552-1|AAL68782.1|  311|Anopheles gambiae D7 protein long fo...    24   3.9  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   8.9  

>AF457552-1|AAL68782.1|  311|Anopheles gambiae D7 protein long form
           protein.
          Length = 311

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -1

Query: 489 WVTIHNKSINILRKLYISTL 430
           ++ +HNK I + RK+Y  T+
Sbjct: 135 YLPVHNKYIGVSRKIYHGTV 154


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
            gambiae T1 retroposon. ).
          Length = 975

 Score = 22.6 bits (46), Expect = 8.9
 Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = -2

Query: 89   QLINHHYYTFKPEETLNR-QNKTNHTTSL 6
            +L NH YY F  + +LN  +N+   + SL
Sbjct: 947  RLFNHFYYLFDFDSSLNSFRNRIFSSNSL 975


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 464,306
Number of Sequences: 2352
Number of extensions: 7426
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51722361
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)