Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0001
         (710 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    29   0.14 
AY280613-1|AAQ21366.1|  257|Anopheles gambiae carbonic anhydrase...    24   4.1  
AF063021-1|AAC16246.1|   69|Anopheles gambiae unknown protein.         24   5.4  
AY062207-1|AAL58568.1|  504|Anopheles gambiae cytochrome P450 CY...    23   7.2  

>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1248

 Score = 29.1 bits (62), Expect = 0.14
 Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
 Frame = -3

Query: 285  CVSKRATSQRPGLVRMRCGIAAASYKIIIKVKRLEINNKLLSYTLKNRSRAPSRGTV-PS 109
            C    A+ QRP   R+ CG  + SY + + + RL I + LL   +K  +R   R    P 
Sbjct: 807  CQRMLASFQRPLAQRVVCGFRSISYSVAVLMPRL-IPHPLL---IKEDARCHQRYLADPE 862

Query: 108  ADRQYEINNVLKANFTETTARRRIASGRLPRANKY 4
            A R   I    +A   E   R   A+   P A++Y
Sbjct: 863  ASRAV-IRREERAVTLEVWQREWDANASNPGASRY 896


>AY280613-1|AAQ21366.1|  257|Anopheles gambiae carbonic anhydrase
           alternate isoform protein.
          Length = 257

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +3

Query: 507 YYEYKPHVTSPPLLSRPVW 563
           YY YK  +T+PP      W
Sbjct: 178 YYTYKGSLTTPPYFESVTW 196


>AF063021-1|AAC16246.1|   69|Anopheles gambiae unknown protein.
          Length = 69

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -1

Query: 293 SLIVYQNEPRPSDQASSVCG 234
           +++V+   P  +DQ SSVCG
Sbjct: 6   AVVVHHTIPLTTDQHSSVCG 25


>AY062207-1|AAL58568.1|  504|Anopheles gambiae cytochrome P450
           CYP6S2 protein.
          Length = 504

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -2

Query: 427 IRINSF*VTNFFLNVVRPSSR 365
           IR N   V +FF+NVVR + R
Sbjct: 237 IRYNDKDVADFFMNVVRDTIR 257


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 715,564
Number of Sequences: 2352
Number of extensions: 13769
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)