Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0001
         (710 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81595-6|CAB04754.2|  295|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z81595-5|CAB04755.2|  289|Caenorhabditis elegans Hypothetical pr...    30   1.9  
U97002-3|AAB52263.1| 1085|Caenorhabditis elegans Hypothetical pr...    30   1.9  
EF445109-1|ABQ01576.1|  273|Caenorhabditis elegans scramblase 1 ...    30   1.9  
Z81528-7|CAB04286.1|  259|Caenorhabditis elegans Hypothetical pr...    28   7.6  

>Z81595-6|CAB04754.2|  295|Caenorhabditis elegans Hypothetical
           protein T22H2.5b protein.
          Length = 295

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = -3

Query: 309 CLGQNQPHCVSKRATSQRPGLVRMRCGIAAASYKII 202
           C+G  Q  C+ +  +    G++R RCG  +++Y I+
Sbjct: 157 CIGCCQQECIIETPSMGVLGIIRQRCGCMSSNYDIM 192


>Z81595-5|CAB04755.2|  289|Caenorhabditis elegans Hypothetical
           protein T22H2.5a protein.
          Length = 289

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = -3

Query: 309 CLGQNQPHCVSKRATSQRPGLVRMRCGIAAASYKII 202
           C+G  Q  C+ +  +    G++R RCG  +++Y I+
Sbjct: 157 CIGCCQQECIIETPSMGVLGIIRQRCGCMSSNYDIM 192


>U97002-3|AAB52263.1| 1085|Caenorhabditis elegans Hypothetical protein
            K09H11.3 protein.
          Length = 1085

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
 Frame = -3

Query: 276  KRATSQRPGLVRMR---CGIAAASYKIIIKVKRLEINNKLLSYTLKNRSRAPSRGTVPSA 106
            K +   RP +  +R   CG+  +      +++ L+     +S  L   S++  R   P +
Sbjct: 984  KASVESRPSVAILRNNNCGLVRSRVNHFQEIEHLQRVETSMSGRLSAMSQSSLRSNDPFS 1043

Query: 105  DRQYEINNVLKANFTETT 52
            DR  +++++  A F+E+T
Sbjct: 1044 DRFSDVSDLRNAAFSEST 1061


>EF445109-1|ABQ01576.1|  273|Caenorhabditis elegans scramblase 1
           protein.
          Length = 273

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = -3

Query: 309 CLGQNQPHCVSKRATSQRPGLVRMRCGIAAASYKII 202
           C+G  Q  C+ +  +    G++R RCG  +++Y I+
Sbjct: 141 CIGCCQQECIIETPSMGVLGIIRQRCGCMSSNYDIM 176


>Z81528-7|CAB04286.1|  259|Caenorhabditis elegans Hypothetical
           protein F35E2.8 protein.
          Length = 259

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = -3

Query: 594 SAARKKKIILSRQVERGEEATLRAVCIHSMITEDLCSTKTSPQRFNIRHLL 442
           S   KK  IL + + +  +  +R +C H        ++KTS  RF +RH L
Sbjct: 30  SETSKKSQILVKTLLKNSQFHMR-ICEHPAAIAVCINSKTSQSRFELRHNL 79


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,737,453
Number of Sequences: 27780
Number of extensions: 301737
Number of successful extensions: 698
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 673
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 698
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)