Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0960
         (841 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g70250.1 68414.m08082 receptor serine/threonine kinase, putat...    33   0.24 
At5g24400.1 68418.m02876 glucosamine/galactosamine-6-phosphate i...    30   1.7  
At4g30470.1 68417.m04326 cinnamoyl-CoA reductase-related similar...    30   2.2  
At4g03440.1 68417.m00471 ankyrin repeat family protein contains ...    29   3.8  
At2g31460.1 68415.m03843 hypothetical protein contains Pfam prof...    28   6.7  
At5g19540.1 68418.m02327 expressed protein                             28   8.9  
At2g34210.1 68415.m04186 KOW domain-containing transcription fac...    28   8.9  
At2g26270.1 68415.m03153 expressed protein ; expression supporte...    28   8.9  

>At1g70250.1 68414.m08082 receptor serine/threonine kinase, putative
           similar to to receptor serine/threonine kinase PR5K
           gi|1235680|gb|AAC49208
          Length = 799

 Score = 33.1 bits (72), Expect = 0.24
 Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
 Frame = +1

Query: 316 SRESAEKLLKEEGEDGVFLVRE----SNTSPGDYV--LSVLHQG--QVVHYQIRRHGEDA 471
           SR+ A K+LKE  EDG   + E    S TS  + V  L   ++G  + + Y++  +G   
Sbjct: 482 SRDVAVKILKESNEDGEDFINEIASMSRTSHANIVSLLGFCYEGRKKAIIYELMPNGSLD 541

Query: 472 FFSIEEHTTVHGWILLYNITVVIQMDL 552
            F  +  +    W  LYNI V +   L
Sbjct: 542 KFISKNMSAKMEWKTLYNIAVGVSHGL 568


>At5g24400.1 68418.m02876 glucosamine/galactosamine-6-phosphate
           isomerase family protein low similarity to SP|O95336
           6-phosphogluconolactonase (EC 3.1.1.31) (6PGL) {Homo
           sapiens}; contains Pfam profile PF01182:
           Glucosamine-6-phosphate
           isomerase/6-phosphogluconolactonase
          Length = 325

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 16/54 (29%), Positives = 26/54 (48%)
 Frame = -3

Query: 611 LCPRLMRWWFSFTDNGQPSNKSI*ITTVMLYKSIHP*TVVCSSIEKNASSPCLR 450
           LC    +W  S +D+ +P ++ I  T  ++  S H   VVC S +  A    L+
Sbjct: 243 LCNESKKWVVSISDSPKPPSERITFTFPVINSSAHVALVVCGSGKAEAVEAALK 296


>At4g30470.1 68417.m04326 cinnamoyl-CoA reductase-related similar to
           cinnamoyl-CoA reductase from Pinus taeda [GI:17978649],
           Saccharum officinarum [GI:3341511]
          Length = 303

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
 Frame = +1

Query: 373 VRESNTSPGDYVLS-VLHQGQVVHYQIRRHGEDAFFS-IEEHTTVHGWILLYNITVVIQM 546
           V +++T  G ++L  +L +G  VH  IRR+GE      I E  T    +++Y++ V+   
Sbjct: 12  VLDASTYVGFWILKKLLSRGYSVHAAIRRNGESEIEEMIREMETTEERLVVYDVDVLDYQ 71

Query: 547 DLLL 558
            +L+
Sbjct: 72  SILV 75


>At4g03440.1 68417.m00471 ankyrin repeat family protein contains
           ankyrin repeats, Pfam domain PF00023
          Length = 751

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +3

Query: 627 LHRATEAGHFNVVSKLLGKRATGVATPRNQDXQN 728
           +H+A E GH NVV +LL KR        N++ QN
Sbjct: 385 IHKAVEKGHENVVKELL-KRFPDSVEQLNKEGQN 417


>At2g31460.1 68415.m03843 hypothetical protein contains Pfam profile
           PF03754: Domain of unknown function (DUF313)
          Length = 244

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +1

Query: 520 YNITVVIQMDLLLGCPLSVKENHHRMSRGHREQQIYCTEQRKRVI 654
           Y+  ++I    L  C L  K++  ++S  H E   + TE  KR I
Sbjct: 23  YHPQLIIPKKTLFKCDLDDKQSRLQVSSMHMENSGFLTEDEKRTI 67


>At5g19540.1 68418.m02327 expressed protein
          Length = 462

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +1

Query: 286 DNVNWFHGKISRESAEKLLKEEGEDGVFLVRE 381
           D  NW+H  +  E+ + L KE+GE      R+
Sbjct: 201 DTENWYHADLDFETFQLLQKEKGESFFSFARD 232


>At2g34210.1 68415.m04186 KOW domain-containing transcription factor
            family protein
          Length = 990

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 18/63 (28%), Positives = 30/63 (47%)
 Frame = +1

Query: 196  CVLEFGYHDNNHDVIHIT*ENSFLLRMNREDNVNWFHGKISRESAEKLLKEEGEDGVFLV 375
            CV+  G H    + I  T     L+   + + V    GK    +A K++ E+G+DG+  +
Sbjct: 913  CVVALG-HRGEGETIRATQNKVSLVCPKKNERVKILGGKYCGSTA-KVIGEDGQDGIVKL 970

Query: 376  RES 384
             ES
Sbjct: 971  DES 973


>At2g26270.1 68415.m03153 expressed protein ; expression supported
           by MPSS
          Length = 470

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 18/61 (29%), Positives = 27/61 (44%)
 Frame = +1

Query: 193 ICVLEFGYHDNNHDVIHIT*ENSFLLRMNREDNVNWFHGKISRESAEKLLKEEGEDGVFL 372
           I  + FG    NH V     E+   + M+  D+  +    IS E   K+LK  GE G  +
Sbjct: 102 IQAVHFGTSTKNHQVSSSGTESGTSVDMSLADHCMYVDSDISDELRLKVLKVAGEQGAKV 161

Query: 373 V 375
           +
Sbjct: 162 I 162


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,358,835
Number of Sequences: 28952
Number of extensions: 356817
Number of successful extensions: 891
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 891
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1941125600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)