Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0958
         (852 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ277365-1|CAC10539.1|  796|Homo sapiens polyglutamine-containin...    79   2e-14
AY278024-1|AAP78945.1|  571|Homo sapiens interferon regulatory f...    76   2e-13
AY278023-1|AAP78944.1|  587|Homo sapiens interferon regulatory f...    76   2e-13
AL160408-2|CAI22768.1|  571|Homo sapiens interferon regulatory f...    76   2e-13
AL160408-1|CAI22767.1|  587|Homo sapiens interferon regulatory f...    76   2e-13
BC039002-1|AAH39002.1|  584|Homo sapiens interferon regulatory f...    75   4e-13
BC038222-1|AAH38222.1|  584|Homo sapiens interferon regulatory f...    75   4e-13
AY278022-1|AAP78943.1|  584|Homo sapiens interferon regulatory f...    75   4e-13
AK223622-1|BAD97342.1|  584|Homo sapiens interferon regulatory f...    75   4e-13
BC078181-1|AAH78181.1|  584|Homo sapiens interferon regulatory f...    73   1e-12
AF490839-1|AAM33254.1| 1093|Homo sapiens RGS3 isoform C2PA-RGS3 ...    31   5.3  
EF560746-1|ABQ59056.1|  979|Homo sapiens KIAA1394 protein protein.     30   9.3  
BC036557-1|AAH36557.1|  385|Homo sapiens KIAA1394 protein protein.     30   9.3  
AB037815-1|BAA92632.1| 1003|Homo sapiens KIAA1394 protein protein.     30   9.3  

>AJ277365-1|CAC10539.1|  796|Homo sapiens polyglutamine-containing
           protein protein.
          Length = 796

 Score = 79.4 bits (187), Expect = 2e-14
 Identities = 43/77 (55%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
 Frame = +2

Query: 254 AMLHEFSEAVCRGCVNYEGADRIEVVLETARQLKRAHG-XQEGR--GPSHAKGAHRTPLE 424
           AM+ +FSE VCRGCVNYEGADRIE V+ETARQLKRAHG  Q+GR  GP    G     L 
Sbjct: 25  AMIWDFSEPVCRGCVNYEGADRIEFVIETARQLKRAHGCFQDGRSPGPPPPVGVKTVALS 84

Query: 425 AHQNGAETTRGQPAPPA 475
           A +  A       A  A
Sbjct: 85  AKEAAAAAAAAAAAAAA 101



 Score = 40.7 bits (91), Expect = 0.007
 Identities = 15/28 (53%), Positives = 17/28 (60%)
 Frame = +3

Query: 210 KRQHCYLCDLPRMPWQCCMSFQKQCVEG 293
           +RQ CYLCDLPRMPW     F +    G
Sbjct: 10  RRQSCYLCDLPRMPWAMIWDFSEPVCRG 37


>AY278024-1|AAP78945.1|  571|Homo sapiens interferon regulatory
           factor-2 binding protein 2B protein.
          Length = 571

 Score = 75.8 bits (178), Expect = 2e-13
 Identities = 35/49 (71%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
 Frame = +2

Query: 254 AMLHEFSEAVCRGCVNYEGADRIEVVLETARQLKRAHG-XQEGRGPSHA 397
           AM+ +F+E VCRGCVNYEGADR+E V+ETARQLKRAHG   EGR P  A
Sbjct: 27  AMIWDFTEPVCRGCVNYEGADRVEFVIETARQLKRAHGCFPEGRSPPGA 75



 Score = 40.7 bits (91), Expect = 0.007
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +3

Query: 195 MSVMQKRQHCYLCDLPRMPWQCCMSFQKQCVEG 293
           ++   +RQ CYLCDLPRMPW     F +    G
Sbjct: 7   VAAASRRQSCYLCDLPRMPWAMIWDFTEPVCRG 39


>AY278023-1|AAP78944.1|  587|Homo sapiens interferon regulatory
           factor-2 binding protein 2A protein.
          Length = 587

 Score = 75.8 bits (178), Expect = 2e-13
 Identities = 35/49 (71%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
 Frame = +2

Query: 254 AMLHEFSEAVCRGCVNYEGADRIEVVLETARQLKRAHG-XQEGRGPSHA 397
           AM+ +F+E VCRGCVNYEGADR+E V+ETARQLKRAHG   EGR P  A
Sbjct: 27  AMIWDFTEPVCRGCVNYEGADRVEFVIETARQLKRAHGCFPEGRSPPGA 75



 Score = 40.7 bits (91), Expect = 0.007
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +3

Query: 195 MSVMQKRQHCYLCDLPRMPWQCCMSFQKQCVEG 293
           ++   +RQ CYLCDLPRMPW     F +    G
Sbjct: 7   VAAASRRQSCYLCDLPRMPWAMIWDFTEPVCRG 39


>AL160408-2|CAI22768.1|  571|Homo sapiens interferon regulatory
           factor 2 binding protein 2 protein.
          Length = 571

 Score = 75.8 bits (178), Expect = 2e-13
 Identities = 35/49 (71%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
 Frame = +2

Query: 254 AMLHEFSEAVCRGCVNYEGADRIEVVLETARQLKRAHG-XQEGRGPSHA 397
           AM+ +F+E VCRGCVNYEGADR+E V+ETARQLKRAHG   EGR P  A
Sbjct: 27  AMIWDFTEPVCRGCVNYEGADRVEFVIETARQLKRAHGCFPEGRSPPGA 75



 Score = 40.7 bits (91), Expect = 0.007
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +3

Query: 195 MSVMQKRQHCYLCDLPRMPWQCCMSFQKQCVEG 293
           ++   +RQ CYLCDLPRMPW     F +    G
Sbjct: 7   VAAASRRQSCYLCDLPRMPWAMIWDFTEPVCRG 39


>AL160408-1|CAI22767.1|  587|Homo sapiens interferon regulatory
           factor 2 binding protein 2 protein.
          Length = 587

 Score = 75.8 bits (178), Expect = 2e-13
 Identities = 35/49 (71%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
 Frame = +2

Query: 254 AMLHEFSEAVCRGCVNYEGADRIEVVLETARQLKRAHG-XQEGRGPSHA 397
           AM+ +F+E VCRGCVNYEGADR+E V+ETARQLKRAHG   EGR P  A
Sbjct: 27  AMIWDFTEPVCRGCVNYEGADRVEFVIETARQLKRAHGCFPEGRSPPGA 75



 Score = 40.7 bits (91), Expect = 0.007
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +3

Query: 195 MSVMQKRQHCYLCDLPRMPWQCCMSFQKQCVEG 293
           ++   +RQ CYLCDLPRMPW     F +    G
Sbjct: 7   VAAASRRQSCYLCDLPRMPWAMIWDFTEPVCRG 39


>BC039002-1|AAH39002.1|  584|Homo sapiens interferon regulatory
           factor 2 binding protein 1 protein.
          Length = 584

 Score = 74.5 bits (175), Expect = 4e-13
 Identities = 37/78 (47%), Positives = 47/78 (60%)
 Frame = +2

Query: 254 AMLHEFSEAVCRGCVNYEGADRIEVVLETARQLKRAHGXQEGRGPSHAKGAHRTPLEAHQ 433
           AM+ +FSEAVCRGCVN+EGADRIE++++ ARQLKR+H   EGR P      H    +   
Sbjct: 23  AMVWDFSEAVCRGCVNFEGADRIELLIDAARQLKRSHVLPEGRSPGPPALKHPATKDL-- 80

Query: 434 NGAETTRGQPAPPAHHTP 487
             A   +G   PP    P
Sbjct: 81  -AAAAAQGPQLPPPQAQP 97



 Score = 39.1 bits (87), Expect = 0.020
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +3

Query: 210 KRQHCYLCDLPRMPWQCCMSFQKQCVEG 293
           +RQ CYLCDLP+MPW     F +    G
Sbjct: 8   RRQWCYLCDLPKMPWAMVWDFSEAVCRG 35


>BC038222-1|AAH38222.1|  584|Homo sapiens interferon regulatory
           factor 2 binding protein 1 protein.
          Length = 584

 Score = 74.5 bits (175), Expect = 4e-13
 Identities = 37/78 (47%), Positives = 47/78 (60%)
 Frame = +2

Query: 254 AMLHEFSEAVCRGCVNYEGADRIEVVLETARQLKRAHGXQEGRGPSHAKGAHRTPLEAHQ 433
           AM+ +FSEAVCRGCVN+EGADRIE++++ ARQLKR+H   EGR P      H    +   
Sbjct: 23  AMVWDFSEAVCRGCVNFEGADRIELLIDAARQLKRSHVLPEGRSPGPPALKHPATKDL-- 80

Query: 434 NGAETTRGQPAPPAHHTP 487
             A   +G   PP    P
Sbjct: 81  -AAAAAQGPQLPPPQAQP 97



 Score = 39.1 bits (87), Expect = 0.020
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +3

Query: 210 KRQHCYLCDLPRMPWQCCMSFQKQCVEG 293
           +RQ CYLCDLP+MPW     F +    G
Sbjct: 8   RRQWCYLCDLPKMPWAMVWDFSEAVCRG 35


>AY278022-1|AAP78943.1|  584|Homo sapiens interferon regulatory
           factor-2 binding protein 1 protein.
          Length = 584

 Score = 74.5 bits (175), Expect = 4e-13
 Identities = 37/78 (47%), Positives = 47/78 (60%)
 Frame = +2

Query: 254 AMLHEFSEAVCRGCVNYEGADRIEVVLETARQLKRAHGXQEGRGPSHAKGAHRTPLEAHQ 433
           AM+ +FSEAVCRGCVN+EGADRIE++++ ARQLKR+H   EGR P      H    +   
Sbjct: 23  AMVWDFSEAVCRGCVNFEGADRIELLIDAARQLKRSHVLPEGRSPGPPALKHPATKDL-- 80

Query: 434 NGAETTRGQPAPPAHHTP 487
             A   +G   PP    P
Sbjct: 81  -AAAAAQGPQLPPPQAQP 97



 Score = 39.1 bits (87), Expect = 0.020
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +3

Query: 210 KRQHCYLCDLPRMPWQCCMSFQKQCVEG 293
           +RQ CYLCDLP+MPW     F +    G
Sbjct: 8   RRQWCYLCDLPKMPWAMVWDFSEAVCRG 35


>AK223622-1|BAD97342.1|  584|Homo sapiens interferon regulatory
           factor 2 binding protein 1 variant protein.
          Length = 584

 Score = 74.5 bits (175), Expect = 4e-13
 Identities = 37/78 (47%), Positives = 47/78 (60%)
 Frame = +2

Query: 254 AMLHEFSEAVCRGCVNYEGADRIEVVLETARQLKRAHGXQEGRGPSHAKGAHRTPLEAHQ 433
           AM+ +FSEAVCRGCVN+EGADRIE++++ ARQLKR+H   EGR P      H    +   
Sbjct: 23  AMVWDFSEAVCRGCVNFEGADRIELLIDAARQLKRSHVLPEGRSPGPPALKHPATKDP-- 80

Query: 434 NGAETTRGQPAPPAHHTP 487
             A   +G   PP    P
Sbjct: 81  -AAAAAQGPQLPPPQAQP 97



 Score = 39.1 bits (87), Expect = 0.020
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +3

Query: 210 KRQHCYLCDLPRMPWQCCMSFQKQCVEG 293
           +RQ CYLCDLP+MPW     F +    G
Sbjct: 8   RRQWCYLCDLPKMPWAMVWDFSEAVCRG 35


>BC078181-1|AAH78181.1|  584|Homo sapiens interferon regulatory
           factor 2 binding protein 1 protein.
          Length = 584

 Score = 72.9 bits (171), Expect = 1e-12
 Identities = 36/78 (46%), Positives = 47/78 (60%)
 Frame = +2

Query: 254 AMLHEFSEAVCRGCVNYEGADRIEVVLETARQLKRAHGXQEGRGPSHAKGAHRTPLEAHQ 433
           A++ +FSEAVCRGCVN+EGADRIE++++ ARQLKR+H   EGR P      H    +   
Sbjct: 23  AIVWDFSEAVCRGCVNFEGADRIELLIDAARQLKRSHVLPEGRSPGPPALKHPATKDL-- 80

Query: 434 NGAETTRGQPAPPAHHTP 487
             A   +G   PP    P
Sbjct: 81  -AAAAAQGPQLPPPQAQP 97



 Score = 39.1 bits (87), Expect = 0.020
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +3

Query: 210 KRQHCYLCDLPRMPWQCCMSFQKQCVEG 293
           +RQ CYLCDLP+MPW     F +    G
Sbjct: 8   RRQWCYLCDLPKMPWAIVWDFSEAVCRG 35


>AF490839-1|AAM33254.1| 1093|Homo sapiens RGS3 isoform C2PA-RGS3
           protein.
          Length = 1093

 Score = 31.1 bits (67), Expect = 5.3
 Identities = 18/54 (33%), Positives = 25/54 (46%)
 Frame = +2

Query: 329 VLETARQLKRAHGXQEGRGPSHAKGAHRTPLEAHQNGAETTRGQPAPPAHHTPT 490
           + ET    KR    +EG+GP    GA  +P +    G E   GQ  PP   +P+
Sbjct: 576 MFETEADEKREMALEEGKGP----GAEDSPSKEPSPGQELPPGQDLPPNKDSPS 625


>EF560746-1|ABQ59056.1|  979|Homo sapiens KIAA1394 protein protein.
          Length = 979

 Score = 30.3 bits (65), Expect = 9.3
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = +2

Query: 200 GDAETATLLPLRLAPHAVAMLHEFSEAVCRGCVNYEGADRIEVVLETA 343
           G  ETA  +P  LAP   A + + +   C GC   +G   +E+ L  A
Sbjct: 788 GFTETAACMPTGLAPEQEAQMVQAAFRCCLGCGLLDGVFNVELKLTGA 835


>BC036557-1|AAH36557.1|  385|Homo sapiens KIAA1394 protein protein.
          Length = 385

 Score = 30.3 bits (65), Expect = 9.3
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = +2

Query: 200 GDAETATLLPLRLAPHAVAMLHEFSEAVCRGCVNYEGADRIEVVLETA 343
           G  ETA  +P  LAP   A + + +   C GC   +G   +E+ L  A
Sbjct: 194 GFTETAACMPTGLAPEQEAQMVQAAFRCCLGCGLLDGVFNVELKLTGA 241


>AB037815-1|BAA92632.1| 1003|Homo sapiens KIAA1394 protein protein.
          Length = 1003

 Score = 30.3 bits (65), Expect = 9.3
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = +2

Query: 200 GDAETATLLPLRLAPHAVAMLHEFSEAVCRGCVNYEGADRIEVVLETA 343
           G  ETA  +P  LAP   A + + +   C GC   +G   +E+ L  A
Sbjct: 812 GFTETAACMPTGLAPEQEAQMVQAAFRCCLGCGLLDGVFNVELKLTGA 859


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,171,433
Number of Sequences: 237096
Number of extensions: 2130400
Number of successful extensions: 6227
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6226
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10816958492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)