Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0958
         (852 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119139-1|AAM50999.1|  615|Drosophila melanogaster RE41430p pro...    69   6e-12
AE014298-1780|AAF48175.2|  615|Drosophila melanogaster CG11138-P...    69   6e-12
AE014297-186|AAN13261.1|  654|Drosophila melanogaster CG31537-PA...    32   1.1  

>AY119139-1|AAM50999.1|  615|Drosophila melanogaster RE41430p
           protein.
          Length = 615

 Score = 69.3 bits (162), Expect = 6e-12
 Identities = 32/50 (64%), Positives = 39/50 (78%)
 Frame = +2

Query: 254 AMLHEFSEAVCRGCVNYEGADRIEVVLETARQLKRAHGXQEGRGPSHAKG 403
           AM+++FSEAVCRGCVNYEGADRIE VL+ ARQ+KR H   + +  SH  G
Sbjct: 21  AMINDFSEAVCRGCVNYEGADRIEAVLDAARQMKRLHPASK-QQRSHENG 69



 Score = 48.8 bits (111), Expect = 9e-06
 Identities = 19/33 (57%), Positives = 21/33 (63%)
 Frame = +3

Query: 195 MSVMQKRQHCYLCDLPRMPWQCCMSFQKQCVEG 293
           MS+  KRQHCYLCDLPRMPW     F +    G
Sbjct: 1   MSLQTKRQHCYLCDLPRMPWAMINDFSEAVCRG 33


>AE014298-1780|AAF48175.2|  615|Drosophila melanogaster CG11138-PC,
           isoform C protein.
          Length = 615

 Score = 69.3 bits (162), Expect = 6e-12
 Identities = 32/50 (64%), Positives = 39/50 (78%)
 Frame = +2

Query: 254 AMLHEFSEAVCRGCVNYEGADRIEVVLETARQLKRAHGXQEGRGPSHAKG 403
           AM+++FSEAVCRGCVNYEGADRIE VL+ ARQ+KR H   + +  SH  G
Sbjct: 21  AMINDFSEAVCRGCVNYEGADRIEAVLDAARQMKRLHPASK-QQRSHENG 69



 Score = 48.8 bits (111), Expect = 9e-06
 Identities = 19/33 (57%), Positives = 21/33 (63%)
 Frame = +3

Query: 195 MSVMQKRQHCYLCDLPRMPWQCCMSFQKQCVEG 293
           MS+  KRQHCYLCDLPRMPW     F +    G
Sbjct: 1   MSLQTKRQHCYLCDLPRMPWAMINDFSEAVCRG 33


>AE014297-186|AAN13261.1|  654|Drosophila melanogaster CG31537-PA
           protein.
          Length = 654

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 18/55 (32%), Positives = 24/55 (43%)
 Frame = +3

Query: 87  YHGDSVFSRRHNKSVTIFKRNEENRSLALRTTPGGEMSVMQKRQHCYLCDLPRMP 251
           Y    + S R   SV   KRN++ + + LRT P    S      HC+    PR P
Sbjct: 483 YRQSVMCSNRQAHSVRQLKRNKQQKHVQLRTKPSSH-SRHHHHHHCHKQQRPRAP 536


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,842,580
Number of Sequences: 53049
Number of extensions: 688994
Number of successful extensions: 2057
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2055
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4085918148
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)