Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0958
(852 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical pr... 57 2e-08
Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical pr... 57 2e-08
Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical pr... 33 0.34
Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical pr... 33 0.34
Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical pr... 33 0.34
Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical pr... 33 0.34
Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical p... 33 0.34
Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical p... 33 0.34
Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical p... 33 0.34
AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protei... 33 0.34
AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protei... 33 0.34
AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protei... 33 0.34
Z68303-12|CAA92644.2| 969|Caenorhabditis elegans Hypothetical p... 31 0.79
Z68303-1|CAC42387.1| 475|Caenorhabditis elegans Hypothetical pr... 31 0.79
Z68302-9|CAA92636.2| 969|Caenorhabditis elegans Hypothetical pr... 31 0.79
U41025-3|AAA82348.1| 244|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z81142-2|CAB03504.1| 337|Caenorhabditis elegans Hypothetical pr... 28 9.7
AC024214-13|AAM97984.1| 296|Caenorhabditis elegans Collagen pro... 28 9.7
>Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical
protein M04G12.1b protein.
Length = 403
Score = 56.8 bits (131), Expect = 2e-08
Identities = 29/65 (44%), Positives = 40/65 (61%)
Frame = +2
Query: 254 AMLHEFSEAVCRGCVNYEGADRIEVVLETARQLKRAHGXQEGRGPSHAKGAHRTPLEAHQ 433
A+++++ E VCRGCVNYEG+DRIE+VLE RQ K+ G P +AK + R Q
Sbjct: 63 AIINDYIEPVCRGCVNYEGSDRIELVLEETRQQKKLQGVGIS-DPQNAKTSLRDITLTQQ 121
Query: 434 NGAET 448
+T
Sbjct: 122 QPLQT 126
Score = 35.5 bits (78), Expect = 0.048
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +3
Query: 213 RQHCYLCDLPRMPW 254
RQ CYLCDLPR PW
Sbjct: 49 RQQCYLCDLPRWPW 62
>Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical
protein M04G12.1a protein.
Length = 457
Score = 56.8 bits (131), Expect = 2e-08
Identities = 29/65 (44%), Positives = 40/65 (61%)
Frame = +2
Query: 254 AMLHEFSEAVCRGCVNYEGADRIEVVLETARQLKRAHGXQEGRGPSHAKGAHRTPLEAHQ 433
A+++++ E VCRGCVNYEG+DRIE+VLE RQ K+ G P +AK + R Q
Sbjct: 90 AIINDYIEPVCRGCVNYEGSDRIELVLEETRQQKKLQGVGIS-DPQNAKTSLRDITLTQQ 148
Query: 434 NGAET 448
+T
Sbjct: 149 QPLQT 153
Score = 35.5 bits (78), Expect = 0.048
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +3
Query: 213 RQHCYLCDLPRMPW 254
RQ CYLCDLPR PW
Sbjct: 76 RQQCYLCDLPRWPW 89
>Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical protein
C36B1.1d protein.
Length = 1175
Score = 32.7 bits (71), Expect = 0.34
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = +2
Query: 314 DRIEVVLETARQL-KRAHGXQEGRGPSHAKGAHR--TPLEAHQNGAETTRGQPAPPAHHT 484
D IE + + K ++ G P + H T E + GA G PAPPA+ T
Sbjct: 823 DDIERIARRVASIQKESNEPMRGDLPEYNSKVHSFTTKGEKGERGAPGAPGAPAPPAYGT 882
Query: 485 PTVGFTLHIH 514
T G +++H
Sbjct: 883 LTTGTAVNVH 892
>Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 32.7 bits (71), Expect = 0.34
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = +2
Query: 314 DRIEVVLETARQL-KRAHGXQEGRGPSHAKGAHR--TPLEAHQNGAETTRGQPAPPAHHT 484
D IE + + K ++ G P + H T E + GA G PAPPA+ T
Sbjct: 426 DDIERIARRVASIQKESNEPMRGDLPEYNSKVHSFTTKGEKGERGAPGAPGAPAPPAYGT 485
Query: 485 PTVGFTLHIH 514
T G +++H
Sbjct: 486 LTTGTAVNVH 495
>Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 32.7 bits (71), Expect = 0.34
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = +2
Query: 314 DRIEVVLETARQL-KRAHGXQEGRGPSHAKGAHR--TPLEAHQNGAETTRGQPAPPAHHT 484
D IE + + K ++ G P + H T E + GA G PAPPA+ T
Sbjct: 786 DDIERIARRVASIQKESNEPMRGDLPEYNSKVHSFTTKGEKGERGAPGAPGAPAPPAYGT 845
Query: 485 PTVGFTLHIH 514
T G +++H
Sbjct: 846 LTTGTAVNVH 855
>Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical
protein C36B1.1c protein.
Length = 650
Score = 32.7 bits (71), Expect = 0.34
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = +2
Query: 314 DRIEVVLETARQL-KRAHGXQEGRGPSHAKGAHR--TPLEAHQNGAETTRGQPAPPAHHT 484
D IE + + K ++ G P + H T E + GA G PAPPA+ T
Sbjct: 298 DDIERIARRVASIQKESNEPMRGDLPEYNSKVHSFTTKGEKGERGAPGAPGAPAPPAYGT 357
Query: 485 PTVGFTLHIH 514
T G +++H
Sbjct: 358 LTTGTAVNVH 367
>Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical
protein C36B1.1d protein.
Length = 1175
Score = 32.7 bits (71), Expect = 0.34
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = +2
Query: 314 DRIEVVLETARQL-KRAHGXQEGRGPSHAKGAHR--TPLEAHQNGAETTRGQPAPPAHHT 484
D IE + + K ++ G P + H T E + GA G PAPPA+ T
Sbjct: 823 DDIERIARRVASIQKESNEPMRGDLPEYNSKVHSFTTKGEKGERGAPGAPGAPAPPAYGT 882
Query: 485 PTVGFTLHIH 514
T G +++H
Sbjct: 883 LTTGTAVNVH 892
>Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 32.7 bits (71), Expect = 0.34
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = +2
Query: 314 DRIEVVLETARQL-KRAHGXQEGRGPSHAKGAHR--TPLEAHQNGAETTRGQPAPPAHHT 484
D IE + + K ++ G P + H T E + GA G PAPPA+ T
Sbjct: 426 DDIERIARRVASIQKESNEPMRGDLPEYNSKVHSFTTKGEKGERGAPGAPGAPAPPAYGT 485
Query: 485 PTVGFTLHIH 514
T G +++H
Sbjct: 486 LTTGTAVNVH 495
>Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 32.7 bits (71), Expect = 0.34
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = +2
Query: 314 DRIEVVLETARQL-KRAHGXQEGRGPSHAKGAHR--TPLEAHQNGAETTRGQPAPPAHHT 484
D IE + + K ++ G P + H T E + GA G PAPPA+ T
Sbjct: 786 DDIERIARRVASIQKESNEPMRGDLPEYNSKVHSFTTKGEKGERGAPGAPGAPAPPAYGT 845
Query: 485 PTVGFTLHIH 514
T G +++H
Sbjct: 846 LTTGTAVNVH 855
>AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protein
protein.
Length = 650
Score = 32.7 bits (71), Expect = 0.34
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = +2
Query: 314 DRIEVVLETARQL-KRAHGXQEGRGPSHAKGAHR--TPLEAHQNGAETTRGQPAPPAHHT 484
D IE + + K ++ G P + H T E + GA G PAPPA+ T
Sbjct: 298 DDIERIARRVASIQKESNEPMRGDLPEYNSKVHSFTTKGEKGERGAPGAPGAPAPPAYGT 357
Query: 485 PTVGFTLHIH 514
T G +++H
Sbjct: 358 LTTGTAVNVH 367
>AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protein
protein.
Length = 778
Score = 32.7 bits (71), Expect = 0.34
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = +2
Query: 314 DRIEVVLETARQL-KRAHGXQEGRGPSHAKGAHR--TPLEAHQNGAETTRGQPAPPAHHT 484
D IE + + K ++ G P + H T E + GA G PAPPA+ T
Sbjct: 426 DDIERIARRVASIQKESNEPMRGDLPEYNSKVHSFTTKGEKGERGAPGAPGAPAPPAYGT 485
Query: 485 PTVGFTLHIH 514
T G +++H
Sbjct: 486 LTTGTAVNVH 495
>AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protein
protein.
Length = 1117
Score = 32.7 bits (71), Expect = 0.34
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = +2
Query: 314 DRIEVVLETARQL-KRAHGXQEGRGPSHAKGAHR--TPLEAHQNGAETTRGQPAPPAHHT 484
D IE + + K ++ G P + H T E + GA G PAPPA+ T
Sbjct: 765 DDIERIARRVASIQKESNEPMRGDLPEYNSKVHSFTTKGEKGERGAPGAPGAPAPPAYGT 824
Query: 485 PTVGFTLHIH 514
T G +++H
Sbjct: 825 LTTGTAVNVH 834
>Z68303-12|CAA92644.2| 969|Caenorhabditis elegans Hypothetical
protein ZK792.1a protein.
Length = 969
Score = 31.5 bits (68), Expect = 0.79
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = -3
Query: 181 VVRSARDRFSSFLLKIVTDLLCLREKTLSPW*SQIKTQNFTFDFADDSCLLPLHKRPR 8
VV S +R L T+ L + L+P QIK NF++ D SC +HK R
Sbjct: 199 VVSSKYNRTVQSALAFSTEFLYKQRTFLAP--IQIKASNFSYHCIDQSCACQIHKSIR 254
>Z68303-1|CAC42387.1| 475|Caenorhabditis elegans Hypothetical
protein ZK792.1b protein.
Length = 475
Score = 31.5 bits (68), Expect = 0.79
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = -3
Query: 181 VVRSARDRFSSFLLKIVTDLLCLREKTLSPW*SQIKTQNFTFDFADDSCLLPLHKRPR 8
VV S +R L T+ L + L+P QIK NF++ D SC +HK R
Sbjct: 199 VVSSKYNRTVQSALAFSTEFLYKQRTFLAP--IQIKASNFSYHCIDQSCACQIHKSIR 254
>Z68302-9|CAA92636.2| 969|Caenorhabditis elegans Hypothetical
protein ZK792.1a protein.
Length = 969
Score = 31.5 bits (68), Expect = 0.79
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = -3
Query: 181 VVRSARDRFSSFLLKIVTDLLCLREKTLSPW*SQIKTQNFTFDFADDSCLLPLHKRPR 8
VV S +R L T+ L + L+P QIK NF++ D SC +HK R
Sbjct: 199 VVSSKYNRTVQSALAFSTEFLYKQRTFLAP--IQIKASNFSYHCIDQSCACQIHKSIR 254
>U41025-3|AAA82348.1| 244|Caenorhabditis elegans Hypothetical
protein C01C4.2 protein.
Length = 244
Score = 28.3 bits (60), Expect = 7.3
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = +1
Query: 388 VACKRSTSYALRSPSKWSRNNKRTTCTSSSPYTDGWFYVTHPRPTASAGLLAEYGS 555
V+ +T Y S R T T SP T FY T+P P + G + E+ S
Sbjct: 71 VSYSNNTGYVEMSKFIEYRTLPSTPNTIRSPSTPPIFYPTYPSPNSIIGTIIEHKS 126
>Z81142-2|CAB03504.1| 337|Caenorhabditis elegans Hypothetical
protein ZK1037.5 protein.
Length = 337
Score = 27.9 bits (59), Expect = 9.7
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 396 QKEHIVRP*KPIKMEQKQQEDNLHLQLTIHRR 491
Q ++ P KP+K+E + Q+ LH L + R+
Sbjct: 85 QHRDLIGPRKPVKVEPETQKSKLHHLLELQRK 116
>AC024214-13|AAM97984.1| 296|Caenorhabditis elegans Collagen
protein 106 protein.
Length = 296
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +2
Query: 380 RGPSHAKGAHRTPLEAHQNGAETTRGQPAPP 472
RGP AKG P A G RG P PP
Sbjct: 194 RGPPGAKGQTYLPGSAGHPGNSGRRGPPGPP 224
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,800,081
Number of Sequences: 27780
Number of extensions: 332150
Number of successful extensions: 1059
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1059
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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