Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0958
         (852 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   2.7  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    22   6.2  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    22   6.2  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    22   6.2  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = +2

Query: 407 HRTPLEAHQNGAETTRGQPAPPAHH 481
           HR     HQ+G  T      PP HH
Sbjct: 329 HRGSSPHHQHGNHTMGPTMGPPHHH 353


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 15/50 (30%), Positives = 18/50 (36%)
 Frame = +1

Query: 379 SWSVACKRSTSYALRSPSKWSRNNKRTTCTSSSPYTDGWFYVTHPRPTAS 528
           +W +AC  S   A    SK  R N  T     S   D     T   P+ S
Sbjct: 11  AWFIACTHSFPGAHDEDSKEERKNVDTVLVLPSIERDQMMAATFDFPSLS 60


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 15/50 (30%), Positives = 18/50 (36%)
 Frame = +1

Query: 379 SWSVACKRSTSYALRSPSKWSRNNKRTTCTSSSPYTDGWFYVTHPRPTAS 528
           +W +AC  S   A    SK  R N  T     S   D     T   P+ S
Sbjct: 11  AWFIACTHSFPGAHDEDSKEERKNVDTVLVLPSIERDQMMAATFDFPSLS 60


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 15/50 (30%), Positives = 18/50 (36%)
 Frame = +1

Query: 379 SWSVACKRSTSYALRSPSKWSRNNKRTTCTSSSPYTDGWFYVTHPRPTAS 528
           +W +AC  S   A    SK  R N  T     S   D     T   P+ S
Sbjct: 11  AWFIACTHSFPGAHDEDSKEERKNVDTVLVLPSIERDQMMAATFDFPSLS 60


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,337
Number of Sequences: 438
Number of extensions: 3772
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27431202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)