Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0957
(841 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39998| Best HMM Match : Peptidase_C1 (HMM E-Value=0) 71 1e-12
SB_46438| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 5e-12
SB_4471| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 8e-12
SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_28131| Best HMM Match : Peptidase_C1 (HMM E-Value=1.2e-40) 49 4e-06
SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_28132| Best HMM Match : Peptidase_C1 (HMM E-Value=4.8e-09) 43 4e-04
SB_14239| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_42540| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_34416| Best HMM Match : Peptidase_C1 (HMM E-Value=2e-09) 42 6e-04
SB_32046| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_9009| Best HMM Match : Peptidase_C1 (HMM E-Value=5.9e-40) 42 6e-04
SB_48770| Best HMM Match : Peptidase_C1 (HMM E-Value=1.9e-14) 41 0.001
SB_49461| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_59112| Best HMM Match : Peptidase_C1 (HMM E-Value=1.3) 38 0.010
SB_58003| Best HMM Match : Peptidase_C1 (HMM E-Value=7.6e-05) 37 0.018
SB_11428| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_18818| Best HMM Match : Peptidase_C1 (HMM E-Value=1.1e-39) 34 0.17
>SB_39998| Best HMM Match : Peptidase_C1 (HMM E-Value=0)
Length = 1220
Score = 70.9 bits (166), Expect = 1e-12
Identities = 30/36 (83%), Positives = 31/36 (86%)
Frame = -3
Query: 506 WLVKNSWGRSWGELGYIKMIRNKNNRCGIASSASYP 399
WLVKNSWG SWG GYI M RNKNN+CGIASSASYP
Sbjct: 220 WLVKNSWGYSWGVEGYIMMSRNKNNQCGIASSASYP 255
Score = 58.8 bits (136), Expect = 5e-09
Identities = 28/40 (70%), Positives = 32/40 (80%)
Frame = -1
Query: 649 VSVAIDASXTSFQLYSSGVYNEEECSSTDLDHGVLVVGYG 530
VSVA+DAS +Q YSSGVY+ CSST LDHGVLV+GYG
Sbjct: 175 VSVAVDAS--QWQFYSSGVYDNPYCSSTQLDHGVLVIGYG 212
>SB_46438| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 63
Score = 68.9 bits (161), Expect = 5e-12
Identities = 29/38 (76%), Positives = 31/38 (81%)
Frame = -3
Query: 506 WLVKNSWGRSWGELGYIKMIRNKNNRCGIASSASYPXV 393
WLVKNSWG WG GYI M RNK+N+CGIASSASYP V
Sbjct: 26 WLVKNSWGTGWGMSGYILMSRNKDNQCGIASSASYPLV 63
Score = 34.3 bits (75), Expect = 0.12
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1
Query: 577 CSSTDLDHGVLVVGYGTD 524
CSST LDH +LVVGYG +
Sbjct: 3 CSSTQLDHAILVVGYGNN 20
>SB_4471| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 331
Score = 68.1 bits (159), Expect = 8e-12
Identities = 27/38 (71%), Positives = 32/38 (84%)
Frame = -3
Query: 506 WLVKNSWGRSWGELGYIKMIRNKNNRCGIASSASYPXV 393
WLVKNSWG SWGE GYIK+ RN +++CG+AS ASYP V
Sbjct: 294 WLVKNSWGPSWGEEGYIKIARNDHDKCGVASKASYPLV 331
Score = 66.1 bits (154), Expect = 3e-11
Identities = 27/43 (62%), Positives = 35/43 (81%)
Frame = -1
Query: 649 VSVAIDASXTSFQLYSSGVYNEEECSSTDLDHGVLVVGYGTDE 521
+S+AIDAS ++F Y GVY++ +CSST LDHGVL VGYGTD+
Sbjct: 247 ISIAIDASQSTFHFYHQGVYDDPDCSSTRLDHGVLAVGYGTDD 289
>SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 51.2 bits (117), Expect = 1e-06
Identities = 25/43 (58%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Frame = -1
Query: 649 VSVAIDASXTSFQLYSSGVYNEEEC--SSTDLDHGVLVVGYGT 527
+SV+IDAS S YS GVY E +C + DLDH VL VGYGT
Sbjct: 773 ISVSIDASHKSLSFYSYGVYYEPKCGNKNEDLDHSVLAVGYGT 815
Score = 47.2 bits (107), Expect = 2e-05
Identities = 16/35 (45%), Positives = 26/35 (74%)
Frame = -3
Query: 506 WLVKNSWGRSWGELGYIKMIRNKNNRCGIASSASY 402
W++KNSW WG GY+ ++ K+N CG+A++A+Y
Sbjct: 822 WMIKNSWSTHWGMNGYV-LMSQKDNNCGVATAATY 855
>SB_28131| Best HMM Match : Peptidase_C1 (HMM E-Value=1.2e-40)
Length = 295
Score = 49.2 bits (112), Expect = 4e-06
Identities = 18/32 (56%), Positives = 26/32 (81%)
Frame = -3
Query: 506 WLVKNSWGRSWGELGYIKMIRNKNNRCGIASS 411
W+VKNSWG+ WGE G+I++ R K N+CG+ S+
Sbjct: 191 WIVKNSWGKFWGEQGFIRISR-KKNQCGVVSN 221
Score = 45.2 bits (102), Expect = 7e-05
Identities = 19/42 (45%), Positives = 30/42 (71%)
Frame = -1
Query: 646 SVAIDASXTSFQLYSSGVYNEEECSSTDLDHGVLVVGYGTDE 521
S+AI+ + S + YS GVY++ +C + +HGV+VVGYG +E
Sbjct: 146 SIAINVNRKSLKFYSGGVYDDPQCPP-NTNHGVVVVGYGVEE 186
>SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1512
Score = 46.4 bits (105), Expect = 3e-05
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = -3
Query: 506 WLVKNSWGRSWGELGYIKMIRNKNNRCGIASSA 408
W+VKNSW WGE GYIK I K++ CG+A A
Sbjct: 678 WIVKNSWSAMWGEEGYIK-IAMKDDNCGVAQKA 709
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/46 (41%), Positives = 30/46 (65%)
Frame = -1
Query: 649 VSVAIDASXTSFQLYSSGVYNEEECSSTDLDHGVLVVGYGTDEQGV 512
VS+ ++ +F+ Y SG+Y + +C+ LDH L VGYG +E+GV
Sbjct: 632 VSILVNTQPKTFKFYGSGIYYDTQCTHA-LDHAALAVGYG-EEKGV 675
Score = 35.5 bits (78), Expect = 0.054
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -3
Query: 506 WLVKNSWGRSWGELGYIKMIRNKNNRCGI 420
WL+KN W WG G+IK+ K CGI
Sbjct: 1442 WLIKNFWSHKWGNNGFIKI---KQGLCGI 1467
>SB_28132| Best HMM Match : Peptidase_C1 (HMM E-Value=4.8e-09)
Length = 160
Score = 42.7 bits (96), Expect = 4e-04
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = -3
Query: 506 WLVKNSWGRSWGELGYIKMIRNKNNRCGI 420
WL+KNSWG WGE GYI+ I + + CG+
Sbjct: 88 WLIKNSWGHLWGENGYIR-ISSDRDTCGV 115
>SB_14239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 41.9 bits (94), Expect = 6e-04
Identities = 18/29 (62%), Positives = 20/29 (68%)
Frame = -3
Query: 506 WLVKNSWGRSWGELGYIKMIRNKNNRCGI 420
WLVKNSW +WG GYIK I K N CG+
Sbjct: 414 WLVKNSWSTTWGMDGYIK-IAWKRNTCGV 441
>SB_42540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1471
Score = 41.9 bits (94), Expect = 6e-04
Identities = 16/41 (39%), Positives = 30/41 (73%)
Frame = -1
Query: 646 SVAIDASXTSFQLYSSGVYNEEECSSTDLDHGVLVVGYGTD 524
+++I+A+ S + YS G+ +++ CS+ DH VL++GYG+D
Sbjct: 282 TISINANPKSLKFYSDGIMSDKHCSNKT-DHAVLLIGYGSD 321
Score = 37.9 bits (84), Expect = 0.010
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = -3
Query: 506 WLVKNSWGRSWGELGYIKMIRNKNNRCGI 420
WL+KNSW WG G+IK+ K CGI
Sbjct: 327 WLIKNSWSHKWGNNGFIKI---KQGLCGI 352
>SB_34416| Best HMM Match : Peptidase_C1 (HMM E-Value=2e-09)
Length = 817
Score = 41.9 bits (94), Expect = 6e-04
Identities = 16/41 (39%), Positives = 30/41 (73%)
Frame = -1
Query: 646 SVAIDASXTSFQLYSSGVYNEEECSSTDLDHGVLVVGYGTD 524
+++I+A+ S + YS G+ +++ CS+ DH VL++GYG+D
Sbjct: 40 TISINANPKSLKFYSDGIMSDKHCSNKT-DHAVLLIGYGSD 79
Score = 37.9 bits (84), Expect = 0.010
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = -3
Query: 506 WLVKNSWGRSWGELGYIKMIRNKNNRCGI 420
WL+KNSW WG G+IK+ K CGI
Sbjct: 85 WLIKNSWSHKWGNNGFIKI---KQGLCGI 110
>SB_32046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1570
Score = 41.9 bits (94), Expect = 6e-04
Identities = 16/41 (39%), Positives = 30/41 (73%)
Frame = -1
Query: 646 SVAIDASXTSFQLYSSGVYNEEECSSTDLDHGVLVVGYGTD 524
+++I+A+ S + YS G+ +++ CS+ DH VL++GYG+D
Sbjct: 404 TISINANPKSLKFYSDGIMSDKHCSNKT-DHAVLLIGYGSD 443
Score = 37.9 bits (84), Expect = 0.010
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = -3
Query: 506 WLVKNSWGRSWGELGYIKMIRNKNNRCGI 420
WL+KNSW WG G+IK+ K CGI
Sbjct: 449 WLIKNSWSHKWGNNGFIKI---KQGLCGI 474
>SB_9009| Best HMM Match : Peptidase_C1 (HMM E-Value=5.9e-40)
Length = 251
Score = 41.9 bits (94), Expect = 6e-04
Identities = 16/41 (39%), Positives = 30/41 (73%)
Frame = -1
Query: 646 SVAIDASXTSFQLYSSGVYNEEECSSTDLDHGVLVVGYGTD 524
+++I+A+ S + YS G+ +++ CS+ DH VL++GYG+D
Sbjct: 139 TISINANPKSLKFYSDGIMSDKHCSNKT-DHAVLLIGYGSD 178
Score = 37.9 bits (84), Expect = 0.010
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = -3
Query: 506 WLVKNSWGRSWGELGYIKMIRNKNNRCGI 420
WL+KNSW WG G+IK+ K CGI
Sbjct: 184 WLIKNSWSHKWGNNGFIKI---KQGLCGI 209
>SB_48770| Best HMM Match : Peptidase_C1 (HMM E-Value=1.9e-14)
Length = 183
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/45 (40%), Positives = 32/45 (71%)
Frame = -1
Query: 646 SVAIDASXTSFQLYSSGVYNEEECSSTDLDHGVLVVGYGTDEQGV 512
+++I+A+ S + YS G+ +++ CS+ DH VL++GYG+ E GV
Sbjct: 68 TISINANPKSLKYYSDGIMSDKHCSNKT-DHAVLLIGYGS-ENGV 110
Score = 37.9 bits (84), Expect = 0.010
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = -3
Query: 506 WLVKNSWGRSWGELGYIKMIRNKNNRCGI 420
WL+KNSW WG G+IK+ K CGI
Sbjct: 113 WLIKNSWSNKWGNNGFIKI---KQGLCGI 138
>SB_49461| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 257
Score = 37.9 bits (84), Expect = 0.010
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = -3
Query: 506 WLVKNSWGRSWGELGYIKMIRNKNNRCGI 420
WL+KNSW WG G+IK+ K CGI
Sbjct: 189 WLIKNSWSHKWGNNGFIKI---KQGLCGI 214
>SB_59112| Best HMM Match : Peptidase_C1 (HMM E-Value=1.3)
Length = 82
Score = 37.9 bits (84), Expect = 0.010
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = -3
Query: 506 WLVKNSWGRSWGELGYIKMIRNKNNRCGI 420
WL+KNSW WG G+IK+ K CGI
Sbjct: 40 WLIKNSWSHKWGNNGFIKI---KQGLCGI 65
>SB_58003| Best HMM Match : Peptidase_C1 (HMM E-Value=7.6e-05)
Length = 110
Score = 37.1 bits (82), Expect = 0.018
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = -3
Query: 506 WLVKNSWGRSWGELGYIKMI 447
W+V+NSWG WGE G++K++
Sbjct: 64 WVVRNSWGTPWGENGFLKIV 83
>SB_11428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 521
Score = 34.3 bits (75), Expect = 0.12
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -1
Query: 649 VSVAIDASXTSFQLYSSGVYN 587
+SVAIDA SFQ Y SGVYN
Sbjct: 465 ISVAIDAGHMSFQFYHSGVYN 485
>SB_18818| Best HMM Match : Peptidase_C1 (HMM E-Value=1.1e-39)
Length = 504
Score = 33.9 bits (74), Expect = 0.17
Identities = 16/42 (38%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Frame = -1
Query: 649 VSVAIDASXTSFQLYSSGVYNEEE--CSSTDLDHGVLVVGYG 530
+S+ I+A+ + Q Y G+ + + C+ + L+HGVL+VGYG
Sbjct: 349 ISIGINAN--AMQFYMGGIAHPWKIFCNPSSLNHGVLIVGYG 388
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,711,425
Number of Sequences: 59808
Number of extensions: 275729
Number of successful extensions: 565
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 561
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2371447782
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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